CK932872

Overview
NameCK932872
Unique NameCK932872
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12048 contig Csv1_Contig12048:70..878. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932872 vs. ExPASy Swiss-Prot
Match: PARK7_MESAU (Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 7.160e-31
Identity = 78/186 (41.94%), Postives = 115/186 (61.83%), Query Frame = 3
Query:  117 KKVLAPVANGSEPIEAAITIDVLRRSGADVTVASVEKQLRVDACQGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACA-STVESRVQQDGKVVTSRGPGTTMEFAVALVEQLYGKERADEVSGPLVMR 668
            K+ L  +A G+E +E  I +D++RR+G  VTVA +  +  V   + V I  D  + D +    +D++ LPGG  GA NL ES V++ I+K+Q S   L AA+CA P  AL +  +  G K T +P   +++      S  ESRV++DG ++TSRGPGT+ EFA+A+VE L GKE AD+V  PLV++
Sbjct:    4 KRALVILAKGAEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKKQGPYDVVVLPGGNLGAQNLSESPVVKEILKEQESRKGLIAAICAGPT-ALLAHEIGFGSKVTTHPGAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKEAADQVKAPLVLK 188          
BLAST of CK932872 vs. ExPASy Swiss-Prot
Match: PARK7_CHICK (Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.721e-30
Identity = 80/188 (42.55%), Postives = 115/188 (61.17%), Query Frame = 3
Query:  117 KKVLAPVANGSEPIEAAITIDVLRRSGADVTVASVEKQLRVDACQGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQL---APACASTVESRVQQDGKVVTSRGPGTTMEFAVALVEQLYGKERADEVSGPLVMR 668
            K+ L  +A G+E +E  I  DV+RR+G  VTVA +  +  V   + V I  DA + D R +  +D+I LPGG  GA NL ES  ++ I+K Q S   L AA+CA P  AL + G+  G K   +P   +++   A  C S  ESRV++DG ++TSRGPGT+ EF +A+VE L GKE A++V  PL+++
Sbjct:    4 KRALVILAKGAEEMETVIPTDVMRRAGIKVTVAGLTGKEPVQCSRDVLICPDASLEDARKEGPYDVIVLPGGNLGAQNLSESAAVKDILKDQESRKGLIAAICAGPT-ALLAHGIGFGSKVITHPLAKDKMMNGAHYCYS--ESRVEKDGNILTSRGPGTSFEFGLAIVEALMGKEVAEQVKAPLILK 188          
BLAST of CK932872 vs. ExPASy Swiss-Prot
Match: PARK7_MOUSE (Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.350e-29
Identity = 76/186 (40.86%), Postives = 115/186 (61.83%), Query Frame = 3
Query:  117 KKVLAPVANGSEPIEAAITIDVLRRSGADVTVASVEKQLRVDACQGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACA-STVESRVQQDGKVVTSRGPGTTMEFAVALVEQLYGKERADEVSGPLVMR 668
            K+ L  +A G+E +E  I +DV+RR+G  VTVA +  +  V   + V I  D  + D +    +D++ LPGG  GA NL ES +++ I+K+Q S   L AA+CA P  AL +  +  G K T +P   +++      S  ESRV++DG ++TSRGPGT+ EFA+A+VE L GK+ A++V  PLV++
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVMICPDTSLEDAKTQGPYDVVVLPGGNLGAQNLSESPMVKEILKEQESRKGLIAAICAGPT-ALLAHEVGFGCKVTTHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALVGKDMANQVKAPLVLK 188          
BLAST of CK932872 vs. ExPASy Swiss-Prot
Match: PARK7_BOVIN (Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.008e-29
Identity = 76/186 (40.86%), Postives = 114/186 (61.29%), Query Frame = 3
Query:  117 KKVLAPVANGSEPIEAAITIDVLRRSGADVTVASVEKQLRVDACQGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACA-STVESRVQQDGKVVTSRGPGTTMEFAVALVEQLYGKERADEVSGPLVMR 668
            K+ L  +A G+E +E  I +DV+RR+G  VTVA +  +  V   + V I  DA + D + +  +D++ LPGG  GA NL ES  ++ I+K+Q     L AA+CA P  AL +  +  G K T +P   +++      S  E+RV++DG ++TSRGPGT+ EFA+ +VE L GKE AD+V  PLV++
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQEKRKGLIAAICAGPT-ALLAHEIGFGSKVTTHPLAKDKMMNGSHYSYSENRVEKDGLILTSRGPGTSFEFALKIVEVLVGKEVADQVKAPLVLK 188          
BLAST of CK932872 vs. ExPASy Swiss-Prot
Match: PARK7_HUMAN (Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 5.131e-29
Identity = 76/186 (40.86%), Postives = 115/186 (61.83%), Query Frame = 3
Query:  117 KKVLAPVANGSEPIEAAITIDVLRRSGADVTVASVEKQLRVDACQGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACASTV-ESRVQQDGKVVTSRGPGTTMEFAVALVEQLYGKERADEVSGPLVMR 668
            K+ L  +A G+E +E  I +DV+RR+G  VTVA +  +  V   + V I  DA + D + +  +D++ LPGG  GA NL ES  ++ I+K+Q +   L AA+CA P  AL +  +  G K T +P   +++      T  E+RV++DG ++TSRGPGT+ EFA+A+VE L GKE A +V  PLV++
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTVAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPT-ALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLVLK 188          
BLAST of CK932872 vs. ExPASy Swiss-Prot
Match: PARK7_DANRE (Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.131e-29
Identity = 73/186 (39.25%), Postives = 112/186 (60.22%), Query Frame = 3
Query:  117 KKVLAPVANGSEPIEAAITIDVLRRSGADVTVASVEKQLRVDACQGVKIVADALVSDC-RDAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQL-APACASTVESRVQQDGKVVTSRGPGTTMEFAVALVEQLYGKERADEVSGPLVMR 668
            K+ L  +A G+E +E  I +DV+RR+G  VTVA +  +  V   + V I  D+ + D  +   +D++ LPGG+ GA NL ES  ++ ++K Q     L AA+CA P  AL + G+  G   T +P   +++ A       E+RVQ+DG V+TSRGPGT+ EFA+ +VE+L G E A +V  PL+++
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIAVTVAGLAGKEPVQCSREVMICPDSSLEDAHKQGPYDVVLLPGGLLGAQNLSESPAVKEVLKDQEGRKGLIAAICAGPT-ALLAHGIAYGSTVTTHPGAKDKMMAGDHYKYSEARVQKDGNVITSRGPGTSFEFALTIVEELMGAEVAAQVKAPLILK 188          
BLAST of CK932872 vs. ExPASy Swiss-Prot
Match: PARK7_CERAE (Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 6.701e-29
Identity = 75/186 (40.32%), Postives = 115/186 (61.83%), Query Frame = 3
Query:  117 KKVLAPVANGSEPIEAAITIDVLRRSGADVTVASVEKQLRVDACQGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACASTV-ESRVQQDGKVVTSRGPGTTMEFAVALVEQLYGKERADEVSGPLVMR 668
            K+ L  +A G+E +E  I +DV+RR+G  VT+A +  +  V   + V I  DA + D + +  +D++ LPGG  GA NL ES  ++ I+K+Q +   L AA+CA P  AL +  +  G K T +P   +++      T  E+RV++DG ++TSRGPGT+ EFA+A+VE L GKE A +V  PLV++
Sbjct:    4 KRALVILAKGAEEMETVIPVDVMRRAGIKVTIAGLAGKDPVQCSRDVVICPDASLEDAKKEGPYDVVVLPGGNLGAQNLSESAAVKEILKEQENRKGLIAAICAGPT-ALLAHEIGFGSKVTTHPLAKDKMMNGGHYTYSENRVEKDGLILTSRGPGTSFEFALAIVEALNGKEVAAQVKAPLVLK 188          
BLAST of CK932872 vs. ExPASy Swiss-Prot
Match: PARK7_RAT (Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.950e-28
Identity = 73/186 (39.25%), Postives = 115/186 (61.83%), Query Frame = 3
Query:  117 KKVLAPVANGSEPIEAAITIDVLRRSGADVTVASVEKQLRVDACQGVKIVADALVSDCR-DAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACA-STVESRVQQDGKVVTSRGPGTTMEFAVALVEQLYGKERADEVSGPLVMR 668
            K+ L  +A G+E +E  I +D++RR+G  VTVA +  +  V   + V I  D  + + +    +D++ LPGG  GA NL ES +++ I+K+Q +   L AA+CA P  AL +  +  G K T +P   +++      S  ESRV++DG ++TSRGPGT+ EFA+A+VE L GK+ A++V  PLV++
Sbjct:    4 KRALVILAKGAEEMETVIPVDIMRRAGIKVTVAGLAGKDPVQCSRDVVICPDTSLEEAKTQGPYDVVVLPGGNLGAQNLSESALVKEILKEQENRKGLIAAICAGPT-ALLAHEVGFGCKVTSHPLAKDKMMNGSHYSYSESRVEKDGLILTSRGPGTSFEFALAIVEALSGKDMANQVKAPLVLK 188          
BLAST of CK932872 vs. ExPASy Swiss-Prot
Match: THIJ_ECOLI (Protein thiJ OS=Escherichia coli (strain K12) GN=thiJ PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 9.057e-26
Identity = 72/186 (38.71%), Postives = 112/186 (60.22%), Query Frame = 3
Query:  126 LAPVANGSEPIEAAITIDVLRRSGADVTVASV--EKQLRVDACQGVKIVADALVSDCRDAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACASTVESRVQQDG--KVVTSRGPGTTMEFAVALVEQLYGKERADEVSGPLVMRA 671
            L  +A GSE  EA  TID+L R G  VT ASV  +  L +   +GVK++ADA + +  D  +D+I LPGG+ GA   ++S +L   VK+   +GR+ AA+CA+PA  L    +      T +P+  +++ PA    ++ RV  D   K++TS+GPGT ++F + +++ L G+E+A EV+  LVM A
Sbjct:    6 LVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLAITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHDIFPIGNMTGFPTLKDKI-PA-EQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLVGREKAHEVASQLVMAA 189          
BLAST of CK932872 vs. ExPASy Swiss-Prot
Match: THIJ_SALTY (Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=3 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.308e-24
Identity = 71/188 (37.77%), Postives = 112/188 (59.57%), Query Frame = 3
Query:  120 KVLAPVANGSEPIEAAITIDVLRRSGADVTVASV--EKQLRVDACQGVKIVADALVSDCRDAVFDLIALPGGMPGATNLKESEVLESIVKKQASAGRLYAAVCASPAVALGSWGLLKGLKATCYPSFMEQLAPACASTVESRVQQDG--KVVTSRGPGTTMEFAVALVEQLYGKERADEVSGPLVMRA 671
            + L  +A GSE  EA  TID+L R G  VT ASV  +  L +   +GVK++ADA + +  D  +D+I LPGG+ GA   ++S +L   VK+   +GR+ AA+CA+ A  L    +      T +P+  +++ PA    ++ RV  D   K++TS+GPGT ++F + +++ L G+E+A EV+  LVM A
Sbjct:    4 QALVCLAPGSEETEAVTTIDLLVRGGIHVTTASVASDGNLTIVCSRGVKLLADAPLVEVADGDYDIIVLPGGIKGAECFRDSPLLVETVKQFHRSGRIVAAICAAAATVLVPHDIFPIGNMTGFPALKDKI-PA-EQWLDKRVVWDARVKLLTSQGPGTAIDFGLKIIDLLAGREKAHEVASQLVMAA 189          
The following BLAST results are available for this feature:
BLAST of CK932872 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
PARK7_MESAU7.160e-3141.94Protein DJ-1 OS=Mesocricetus auratus GN=PARK7 PE=1... [more]
PARK7_CHICK2.721e-3042.55Protein DJ-1 OS=Gallus gallus GN=PARK7 PE=2 SV=1[more]
PARK7_MOUSE1.350e-2940.86Protein DJ-1 OS=Mus musculus GN=Park7 PE=1 SV=1[more]
PARK7_BOVIN3.008e-2940.86Protein DJ-1 OS=Bos taurus GN=PARK7 PE=2 SV=1[more]
PARK7_HUMAN5.131e-2940.86Protein DJ-1 OS=Homo sapiens GN=PARK7 PE=1 SV=2[more]
PARK7_DANRE5.131e-2939.25Protein DJ-1 OS=Danio rerio GN=park7 PE=2 SV=1[more]
PARK7_CERAE6.701e-2940.32Protein DJ-1 OS=Cercopithecus aethiops GN=PARK7 PE... [more]
PARK7_RAT1.950e-2839.25Protein DJ-1 OS=Rattus norvegicus GN=Park7 PE=1 SV... [more]
THIJ_ECOLI9.057e-2638.71Protein thiJ OS=Escherichia coli (strain K12) GN=t... [more]
THIJ_SALTY1.308e-2437.77Protein thiJ OS=Salmonella typhimurium GN=thiJ PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004350_E05 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IVF_E05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932872 ID=CK932872; Name=CK932872; organism=Citrus sinensis; type=EST; length=809bp
GGGGCTCTCTTCTTCGTCAGTTTCCTCTCACTCAACAGTTTCTCCCCAAA
CAAATTCCTTCTTTGAAAAATCGCATTTTCTCTTTCACAGCAACAGCTAC
AATGTCTTCAACTTCCAAAAAGGTTTTGGCGCCTGTTGCGAACGGGAGTG
AGCCGATTGAGGCCGCGATAACGATCGATGTTTTGAGAAGGTCTGGAGCT
GACGTCACGGTTGCGTCTGTGGAGAAACAGCTTCGTGTCGACGCGTGTCA
AGGTGTCAAGATTGTCGCTGATGCTCTTGTGTCTGACTGCCGCGACGCCG
TTTTTGATCTTATAGCTCTTCCCGGTGGCATGCCTGGTGCTACCAATCTG
AAGGAATCTGAAGTATTAGAAAGCATTGTGAAGAAGCAGGCCTCAGCTGG
GCGTCTTTATGCTGCTGTCTGTGCTTCACCTGCTGTGGCATTAGGGTCTT
GGGGTCTGTTGAAGGGATTGAAGGCTACTTGTTATCCGTCATTTATGGAG
CAATTAGCTCCTGCTTGTGCATCAACTGTTGAATCAAGAGTACAGCAGGA
TGGTAAAGTTGTTACGAGTCGTGGACCTGGCACTACTATGGAGTTTGCCG
TTGCACTTGTTGAGCAGTTGTATGGGAAAGAGAGAGCTGATGAAGTTTCT
GGGCCACTGGTAATGCGTGCAAATCATGGAGATGAATACACTATTGCTGA
ATTCAATCCAATTCAGTGGACATTTGACAATTCTCCCCAGATTCTTGTGC
CTATTGCAAATGGTTCGGAGGAGATGGAAGCTGTTATGATAATTGATATT
CTGCGNNGN
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