CK932874

Overview
NameCK932874
Unique NameCK932874
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length651
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13571 contig Csv1_Contig13571:385..1034. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932874 vs. ExPASy Swiss-Prot
Match: GPX1_ARATH (Phospholipid hydroperoxide glutathione peroxidase 1, chloroplastic OS=Arabidopsis thaliana GN=GPX1 PE=1 SV=2)

HSP 1 Score: 269.626 bits (688), Expect = 9.846e-72
Identity = 126/145 (86.90%), Postives = 138/145 (95.17%), Query Frame = 1
Query:    4 VPLSQFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQKLVVA 438
            V L++FKGKV+LIVNVASRCGLT SNYSELSHLYEKYKTQGFEILAFPCNQFG QEPGSN EIK+FACTRFKAEFPIFDKVDVNGP+TAP+Y+FLKS+AGGFLG L+KWNFEKFL+DK GKV+ERYPPTTSPFQIEKDIQKL+ A
Sbjct:   92 VALNKFKGKVMLIVNVASRCGLTSSNYSELSHLYEKYKTQGFEILAFPCNQFGFQEPGSNSEIKQFACTRFKAEFPIFDKVDVNGPSTAPIYEFLKSNAGGFLGGLIKWNFEKFLIDKKGKVVERYPPTTSPFQIEKDIQKLLAA 236          
BLAST of CK932874 vs. ExPASy Swiss-Prot
Match: GPX1_PEA (Phospholipid hydroperoxide glutathione peroxidase, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 9.216e-70
Identity = 124/145 (85.52%), Postives = 135/145 (93.10%), Query Frame = 1
Query:    4 VPLSQFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQKLVVA 438
            V LS+FKGKVLLIVNVASRCGLT SNY+ELSHLYE +K +G E+LAFPCNQFG QEPGSN EIK+FACT+FKAEFPIFDKVDVNGP TAPVYQFLKSS+GGF GD+VKWNFEKFLVDKNGKV+ERYPPTTSPFQIEKDIQKL+ A
Sbjct:   92 VSLSKFKGKVLLIVNVASRCGLTSSNYTELSHLYENFKNKGLEVLAFPCNQFGMQEPGSNEEIKQFACTKFKAEFPIFDKVDVNGPFTAPVYQFLKSSSGGFFGDIVKWNFEKFLVDKNGKVVERYPPTTSPFQIEKDIQKLLAA 236          
BLAST of CK932874 vs. ExPASy Swiss-Prot
Match: GPX7_ARATH (Putative glutathione peroxidase 7, chloroplastic OS=Arabidopsis thaliana GN=GPX7 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.331e-68
Identity = 122/142 (85.92%), Postives = 131/142 (92.25%), Query Frame = 1
Query:    4 VPLSQFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQKL 429
            V L +FKGK LLIVNVASRCGLT SNYSELS LYEKYK QGFEILAFPCNQFGGQEPGSNPEIK+FACTRFKAEFPIFDKVDVNGP+TAP+Y+FLKS+AGGFLGD++KWNFEKFLVDK GKV+ERYPPTTSPFQIE    KL
Sbjct:   89 VSLDKFKGKPLLIVNVASRCGLTSSNYSELSQLYEKYKNQGFEILAFPCNQFGGQEPGSNPEIKQFACTRFKAEFPIFDKVDVNGPSTAPIYKFLKSNAGGFLGDIIKWNFEKFLVDKKGKVVERYPPTTSPFQIEVPNSKL 230          
BLAST of CK932874 vs. ExPASy Swiss-Prot
Match: GPX4_CITSI (Probable phospholipid hydroperoxide glutathione peroxidase OS=Citrus sinensis GN=CSA PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.475e-59
Identity = 108/143 (75.52%), Postives = 121/143 (84.62%), Query Frame = 1
Query:    4 VPLSQFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQKLV 432
            V LS +KGK+LLIVNVAS+CGLT SNY+ELS LY+KYK QG EILAFPCNQFG QEPG N +I+EFACTRFKAEFPIFDKVDVNG N AP+Y+ LKSS GG  GD +KWNF KFLVDK G V+ERY PTTSP  IEKDI+KL+
Sbjct:   22 VDLSIYKGKLLLIVNVASQCGLTNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGNVVERYAPTTSPLSIEKDIKKLL 164          
BLAST of CK932874 vs. ExPASy Swiss-Prot
Match: GPX4_HELAN (Probable phospholipid hydroperoxide glutathione peroxidase OS=Helianthus annuus GN=GPXHA-2 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 5.604e-59
Identity = 106/143 (74.13%), Postives = 123/143 (86.01%), Query Frame = 1
Query:    4 VPLSQFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQKLV 432
            V LS++KGKVLLIVNVAS+CG T SNY EL+ LY+KYK QGFEILAFPCNQFGGQEPGSN EI+ FACTRFKAE+P+F KV+VNG    P+Y+FLKSS GGFLGD +KWNF KFLVD+ GKV++RY PTTSP  IEKDI+KL+
Sbjct:   35 VELSKYKGKVLLIVNVASQCGFTNSNYPELTTLYQKYKDQGFEILAFPCNQFGGQEPGSNEEIQVFACTRFKAEYPVFSKVNVNGKEADPLYKFLKSSKGGFLGDSIKWNFTKFLVDREGKVVDRYAPTTSPLSIEKDIKKLL 177          
BLAST of CK932874 vs. ExPASy Swiss-Prot
Match: GPX4_MESCR (Probable phospholipid hydroperoxide glutathione peroxidase OS=Mesembryanthemum crystallinum GN=GPXMC1 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 9.559e-59
Identity = 107/143 (74.83%), Postives = 122/143 (85.31%), Query Frame = 1
Query:    4 VPLSQFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQKLV 432
            V LS +KGKVLLIVNVAS+CGLT SNY EL+ LYE+YK +G EILAFPCNQFG QEPG N +I EFACTRFKAEFPIFDKVDVNG N APVY++LKSS GG  GD +KWNF KFLVD++GKV++RY PTTSP  IEKDI+KL+
Sbjct:   25 VDLSIYKGKVLLIVNVASQCGLTNSNYPELTKLYEQYKDKGLEILAFPCNQFGNQEPGDNEQIMEFACTRFKAEFPIFDKVDVNGSNAAPVYKYLKSSKGGLFGDGIKWNFTKFLVDRDGKVVDRYAPTTSPASIEKDIKKLI 167          
BLAST of CK932874 vs. ExPASy Swiss-Prot
Match: GPX6_ARATH (Probable phospholipid hydroperoxide glutathione peroxidase 6, mitochondrial OS=Arabidopsis thaliana GN=GPX6 PE=2 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 1.630e-58
Identity = 106/143 (74.13%), Postives = 122/143 (85.31%), Query Frame = 1
Query:    4 VPLSQFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQKLV 432
            V LS +KGKVLLIVNVAS+CGLT SNY+EL+ LYEKYK  GFEILAFPCNQFG QEPG+N EI +FACTRFKAE+PIFDKVDVNG   APVY+FLKSS GG  GD +KWNF KFLVDK+G V++R+ PTTSP  IEKD++KL+
Sbjct:   86 VDLSIYKGKVLLIVNVASQCGLTNSNYTELAQLYEKYKGHGFEILAFPCNQFGNQEPGTNEEIVQFACTRFKAEYPIFDKVDVNGDKAAPVYKFLKSSKGGLFGDGIKWNFAKFLVDKDGNVVDRFAPTTSPLSIEKDVKKLL 228          
BLAST of CK932874 vs. ExPASy Swiss-Prot
Match: GPX4_SPIOL (Probable phospholipid hydroperoxide glutathione peroxidase OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 3.632e-58
Identity = 105/143 (73.43%), Postives = 122/143 (85.31%), Query Frame = 1
Query:    4 VPLSQFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQKLV 432
            V LS +KGKVLLIVNVAS+CGLT SNY+E++ LYEKY+  G EILAFPCNQFG QEPGSN E+ EFACTRFKAE+PIFDKVDVNG N AP+Y+FLKSS GG  GD +KWNF KFLVDK+G V++RY PTTSP  IEKD++KL+
Sbjct:   25 VDLSIYKGKVLLIVNVASQCGLTNSNYTEMTELYEKYRELGLEILAFPCNQFGNQEPGSNEEVLEFACTRFKAEYPIFDKVDVNGSNAAPIYKFLKSSKGGLFGDGLKWNFTKFLVDKDGNVVDRYAPTTSPKSIEKDVKKLL 167          
BLAST of CK932874 vs. ExPASy Swiss-Prot
Match: GPX4_NICSY (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana sylvestris PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.016e-57
Identity = 102/143 (71.33%), Postives = 121/143 (84.62%), Query Frame = 1
Query:    4 VPLSQFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQKLV 432
            V LS +KGKVL+IVNVAS+CGLT SNY++L+ +Y+KYK QG EILAFPCNQFGGQEPGS  EI+   CTRFKAE+PIFDKVDVNG N AP+Y+FLKSS GGF GD +KWNF KFLVDK G V++RY PTT+P  +EKDI+KL+
Sbjct:   24 VDLSIYKGKVLIIVNVASQCGLTNSNYTDLTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEEIQNMVCTRFKAEYPIFDKVDVNGDNAAPLYKFLKSSKGGFFGDSIKWNFSKFLVDKEGNVVDRYSPTTTPASMEKDIKKLL 166          
BLAST of CK932874 vs. ExPASy Swiss-Prot
Match: GPX4_TOBAC (Probable phospholipid hydroperoxide glutathione peroxidase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 220.32 bits (560), Expect = 6.850e-57
Identity = 101/143 (70.63%), Postives = 121/143 (84.62%), Query Frame = 1
Query:    4 VPLSQFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTRFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKFLVDKNGKVIERYPPTTSPFQIEKDIQKLV 432
            V LS +KGKVL+IVNVAS+CGLT SNY++++ +Y+KYK QG EILAFPCNQFGGQEPGS  EI+   CTRFKAE+PIFDKVDVNG N AP+Y+FLKSS GGF GD +KWNF KFLVDK G V++RY PTT+P  +EKDI+KL+
Sbjct:   24 VDLSIYKGKVLIIVNVASQCGLTNSNYTDMTEIYKKYKDQGLEILAFPCNQFGGQEPGSIEEIQNMVCTRFKAEYPIFDKVDVNGDNAAPLYKFLKSSKGGFFGDSIKWNFSKFLVDKEGNVVDRYSPTTTPASMEKDIKKLL 166          
The following BLAST results are available for this feature:
BLAST of CK932874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
GPX1_ARATH9.846e-7286.90Phospholipid hydroperoxide glutathione peroxidase ... [more]
GPX1_PEA9.216e-7085.52Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX7_ARATH1.331e-6885.92Putative glutathione peroxidase 7, chloroplastic O... [more]
GPX4_CITSI1.475e-5975.52Probable phospholipid hydroperoxide glutathione pe... [more]
GPX4_HELAN5.604e-5974.13Probable phospholipid hydroperoxide glutathione pe... [more]
GPX4_MESCR9.559e-5974.83Probable phospholipid hydroperoxide glutathione pe... [more]
GPX6_ARATH1.630e-5874.13Probable phospholipid hydroperoxide glutathione pe... [more]
GPX4_SPIOL3.632e-5873.43Probable phospholipid hydroperoxide glutathione pe... [more]
GPX4_NICSY4.016e-5771.33Probable phospholipid hydroperoxide glutathione pe... [more]
GPX4_TOBAC6.850e-5770.63Probable phospholipid hydroperoxide glutathione pe... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004350_E07 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IVF_E07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932874 ID=CK932874; Name=CK932874; organism=Citrus sinensis; type=EST; length=651bp
GGGGTTCCTCTTAGCCAGTTTAAGGGCAAAGTTCTGTTGATTGTGAATGT
CGCTTCAAGATGTGGCCTGACACCATCTAATTACTCGGAGCTCTCTCACT
TATATGAGAAGTACAAGACTCAAGGATTTGAGATTCTAGCTTTCCCTTGC
AATCAATTTGGTGGGCAAGAGCCTGGATCAAACCCTGAGATCAAGGAATT
CGCTTGTACTAGGTTTAAGGCAGAATTTCCCATATTTGACAAGGTTGATG
TAAATGGACCAAACACAGCTCCAGTTTACCAGTTTTTGAAGTCAAGTGCT
GGGGGATTTTTAGGCGACCTTGTCAAGTGGAACTTTGAGAAGTTCTTAGT
GGACAAAAATGGTAAAGTCATCGAGAGATATCCACCAACTACCTCGCCTT
TCCAAATTGAGAAGGACATCCAGAAGCTTGTTGTGGCATGAATCTTGACT
TGAGCTGCTTGGCCATGTCTCAGATGTATCGACGAGATAGAAACTGAATA
TATGTATATGTATATTTCTGAATCGGGCATCACATAGATGAATTTTTCCC
TGCCTCCCCTGAAATGTTATAGGTTTTTTATATCCTAATATTTAAAGATT
TGTACTAATTTCGTTGCCGATGAAAAAAAAAAAAAAAAAAAAAAAAAAAA
A
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