CK932895
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK932895 vs. ExPASy Swiss-Prot
Match: RL40_NICSY (60S ribosomal protein L40 OS=Nicotiana sylvestris GN=UBICEP52-7 PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 5.941e-24 Identity = 50/52 (96.15%), Postives = 51/52 (98.08%), Query Frame = 3 Query: 81 IIEPSLMALARKYNQDKMICRKCYARLHPGAVNCRKKKCGHSNQLRPKKKIK 236 IIEPSLMALARKYNQDKMICRKCYARLHP AVNCR+KKCGHSNQLRPKKKIK Sbjct: 1 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRRKKCGHSNQLRPKKKIK 52
BLAST of CK932895 vs. ExPASy Swiss-Prot
Match: RL40_ORYSJ (60S ribosomal protein L40 OS=Oryza sativa subsp. japonica GN=Ub-CEP52-1 PE=3 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 1.013e-23 Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 3 Query: 81 IIEPSLMALARKYNQDKMICRKCYARLHPGAVNCRKKKCGHSNQLRPKKKIK 236 IIEPSL ALARKYNQDKMICRKCYARLHP AVNCRKKKCGHSNQLRPKKKIK Sbjct: 1 IIEPSLQALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 52
BLAST of CK932895 vs. ExPASy Swiss-Prot
Match: RL40_ARATH (60S ribosomal protein L40 OS=Arabidopsis thaliana GN=UBQ1 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 1.013e-23 Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 3 Query: 81 IIEPSLMALARKYNQDKMICRKCYARLHPGAVNCRKKKCGHSNQLRPKKKIK 236 IIEPSLM LARKYNQDKMICRKCYARLHP AVNCRKKKCGHSNQLRPKKKIK Sbjct: 1 IIEPSLMMLARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 52
BLAST of CK932895 vs. ExPASy Swiss-Prot
Match: RL40_BRARA (60S ribosomal protein L40 OS=Brassica rapa PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 2.257e-23 Identity = 50/52 (96.15%), Postives = 50/52 (96.15%), Query Frame = 3 Query: 81 IIEPSLMALARKYNQDKMICRKCYARLHPGAVNCRKKKCGHSNQLRPKKKIK 236 IIEPSLMALARKYNQ KMICRKCYARLHP AVNCRKKKCGHSNQLRPKKKIK Sbjct: 1 IIEPSLMALARKYNQAKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 52
BLAST of CK932895 vs. ExPASy Swiss-Prot
Match: RL40_CHLRE (60S ribosomal protein L40 OS=Chlamydomonas reinhardtii GN=UBI1 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.113e-21 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 3 Query: 81 IIEPSLMALARKYNQDKMICRKCYARLHPGAVNCRKKKCGHSNQLRPKKKIK 236 IIEPSL ALARKYNQ+KMICRKCYARLHP A NCRKK CGH+NQLRPKKK+K Sbjct: 1 IIEPSLQALARKYNQEKMICRKCYARLHPRAKNCRKKSCGHTNQLRPKKKLK 52
BLAST of CK932895 vs. ExPASy Swiss-Prot
Match: RL40_SHEEP (60S ribosomal protein L40 OS=Ovis aries GN=UBA52 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.370e-20 Identity = 44/52 (84.62%), Postives = 47/52 (90.38%), Query Frame = 3 Query: 81 IIEPSLMALARKYNQDKMICRKCYARLHPGAVNCRKKKCGHSNQLRPKKKIK 236 IIEPSL LA+KYN DKMICRKCYARLHP AVNCRKKKCGH+N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
BLAST of CK932895 vs. ExPASy Swiss-Prot
Match: RL40_RAT (60S ribosomal protein L40 OS=Rattus norvegicus GN=Uba52 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.370e-20 Identity = 44/52 (84.62%), Postives = 47/52 (90.38%), Query Frame = 3 Query: 81 IIEPSLMALARKYNQDKMICRKCYARLHPGAVNCRKKKCGHSNQLRPKKKIK 236 IIEPSL LA+KYN DKMICRKCYARLHP AVNCRKKKCGH+N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
BLAST of CK932895 vs. ExPASy Swiss-Prot
Match: RL40_PONAB (60S ribosomal protein L40 OS=Pongo abelii GN=UBA52 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.370e-20 Identity = 44/52 (84.62%), Postives = 47/52 (90.38%), Query Frame = 3 Query: 81 IIEPSLMALARKYNQDKMICRKCYARLHPGAVNCRKKKCGHSNQLRPKKKIK 236 IIEPSL LA+KYN DKMICRKCYARLHP AVNCRKKKCGH+N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
BLAST of CK932895 vs. ExPASy Swiss-Prot
Match: RL40_PIG (60S ribosomal protein L40 OS=Sus scrofa GN=UBA52 PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.370e-20 Identity = 44/52 (84.62%), Postives = 47/52 (90.38%), Query Frame = 3 Query: 81 IIEPSLMALARKYNQDKMICRKCYARLHPGAVNCRKKKCGHSNQLRPKKKIK 236 IIEPSL LA+KYN DKMICRKCYARLHP AVNCRKKKCGH+N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
BLAST of CK932895 vs. ExPASy Swiss-Prot
Match: RL40_OPHHA (60S ribosomal protein L40 OS=Ophiophagus hannah PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.370e-20 Identity = 44/52 (84.62%), Postives = 47/52 (90.38%), Query Frame = 3 Query: 81 IIEPSLMALARKYNQDKMICRKCYARLHPGAVNCRKKKCGHSNQLRPKKKIK 236 IIEPSL LA+KYN DKMICRKCYARLHP AVNCRKKKCGH+N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52 The following BLAST results are available for this feature:
BLAST of CK932895 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CK932895 ID=CK932895; Name=CK932895; organism=Citrus sinensis; type=EST; length=269bpback to top |