CK932933

Overview
NameCK932933
Unique NameCK932933
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4168 contig Csv1_Contig4168:56..813. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_ARATH (LL-diaminopimelate aminotransferase, chloroplastic OS=Arabidopsis thaliana GN=DAP PE=1 SV=1)

HSP 1 Score: 318.931 bits (816), Expect = 1.844e-86
Identity = 157/200 (78.50%), Postives = 177/200 (88.50%), Query Frame = 2
Query:  161 RRQNAWV-QAKRISVCKCVAAPQEEKIAYKTKVSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            R +NA +  AKR++ CKCVA PQE KI YKTKVSRN N+ KLQAGYLFPEIARR++AH+LKYPDA+VISLGIGDTTEPIPEVITSA+AK+++ LST EGYSGYGAEQG KPLRAAIA TFY  LGI + D+FVSDGAKCDISRLQ++FGSNVT+AVQDPSYPAYVDSSVIMGQTG+F  D +KYG IEYMRCT ENGFFP
Sbjct:   28 RTRNACLPMAKRVNTCKCVATPQE-KIEYKTKVSRNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRLQVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFP 226          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_PARUW (LL-diaminopimelate aminotransferase OS=Protochlamydia amoebophila (strain UWE25) GN=dapL PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 3.519e-45
Identity = 90/168 (53.57%), Postives = 121/168 (72.02%), Query Frame = 2
Query:  254 VSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLGIEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            V RN +L KLQ+GYLFPEI RRK   + K+P A++I+LGIGDTT+PIP  I+ A+   +  L++++ Y GYG EQG   LR AIA  +Y+   I+  ++FVSDG+KCD+ RLQI+FGS+ T+AVQ+P+YPAYVD+ VI GQ   FQ   ++Y +I YM C  EN FFP
Sbjct:    2 VKRNVHLTKLQSGYLFPEINRRKNEFLKKHPSAQLINLGIGDTTQPIPLYISEAMQNFAKQLASEKTYRGYGTEQGSILLREAIAEQYYQGK-IDPQEVFVSDGSKCDVGRLQILFGSDATIAVQNPTYPAYVDTGVINGQASFFQTSTKQYQRITYMSCLPENNFFP 168          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_SYNS3 (LL-diaminopimelate aminotransferase OS=Synechococcus sp. (strain CC9311) GN=dapL PE=3 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 5.631e-35
Identity = 81/168 (48.21%), Postives = 105/168 (62.50%), Query Frame = 2
Query:  254 VSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG--IEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGF 751
            V  NGN  KL+AGYLFPEI RR  A     P+A++I LGIGD TEP+P+    A+      + T EG+ GYG EQG   LR AIA   ++  G  I   +IFVSDG+KCD S +  + GS   +AV DP YP YVDS+V+ G+TGE   D  +YG + Y+  +A+NGF
Sbjct:    2 VKVNGNYLKLKAGYLFPEIGRRVKAFSSANPEAQLIRLGIGDVTEPLPQACRDAMKSAIDEMGTAEGFHGYGPEQGYAWLREAIARDDFQARGCEISAEEIFVSDGSKCDSSNILDILGSGNRIAVTDPVYPVYVDSNVMAGRTGESGDDG-RYGGLTYLPISADNGF 168          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_LEPBL (LL-diaminopimelate aminotransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=dapL PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.606e-35
Identity = 78/167 (46.71%), Postives = 104/167 (62.28%), Query Frame = 2
Query:  263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG--IEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            N N  KL+AGYLFPEI++R   +  K P A++I LGIGD T PI   +  A+   S  + T  G+ GYG EQG   L  +IA+  Y  LG  I+E +IFVSDG+KCD   +Q +F ++  +AV DP YP YVD++V+ G+TGE   D  +Y  + YM  T ENGF P
Sbjct:    5 NENYLKLKAGYLFPEISKRVKTYSEKNPSAKIIRLGIGDVTLPIVPSVVDAMIAASKEMGTAGGFHGYGPEQGYSFLLKSIANNDYGSLGIKIDESEIFVSDGSKCDCGNIQEIFSTDAKIAVSDPVYPVYVDTNVMAGRTGEIGADG-RYSNLIYMPATKENGFQP 170          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_LEPBJ (LL-diaminopimelate aminotransferase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=dapL PE=3 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 9.606e-35
Identity = 78/167 (46.71%), Postives = 104/167 (62.28%), Query Frame = 2
Query:  263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG--IEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            N N  KL+AGYLFPEI++R   +  K P A++I LGIGD T PI   +  A+   S  + T  G+ GYG EQG   L  +IA+  Y  LG  I+E +IFVSDG+KCD   +Q +F ++  +AV DP YP YVD++V+ G+TGE   D  +Y  + YM  T ENGF P
Sbjct:    5 NENYLKLKAGYLFPEISKRVKTYSEKNPSAKIIRLGIGDVTLPIVPSVVDAMIAASKEMGTAGGFHGYGPEQGYSFLLKSIANNDYGSLGIKIDESEIFVSDGSKCDCGNIQEIFSTDAKIAVSDPVYPVYVDTNVMAGRTGEIGADG-RYSNLIYMPATKENGFQP 170          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_SYNPW (LL-diaminopimelate aminotransferase OS=Synechococcus sp. (strain WH7803) GN=dapL PE=3 SV=2)

HSP 1 Score: 146.362 bits (368), Expect = 1.638e-34
Identity = 81/168 (48.21%), Postives = 104/168 (61.90%), Query Frame = 2
Query:  254 VSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG--IEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGF 751
            V  NGN  KL+AGYLFPEI RR  A     PDA +I LGIGD TEP+P+    A+     A+ T EG+ GYG EQG   LR AIA+  +K  G  I   +IFVSDG+KCD S +  + G    +AV DP YP YVDS+V+ G+TG+   D  +Y  + Y+  +A+NGF
Sbjct:    2 VQVNGNYLKLKAGYLFPEIGRRVKAFSAANPDAALIRLGIGDVTEPLPQACRDAMKTAIDAMGTAEGFHGYGPEQGYGWLREAIATHDFKARGCDISAEEIFVSDGSKCDSSNILDILGEGNRVAVTDPVYPVYVDSNVMAGRTGD-AGDEGRYAGLTYLPISADNGF 168          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_LEPIN (LL-diaminopimelate aminotransferase OS=Leptospira interrogans GN=dapL PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.650e-34
Identity = 78/167 (46.71%), Postives = 104/167 (62.28%), Query Frame = 2
Query:  263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG--IEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            N N  KL+AGYLFPEI++R   +  K P A++I LGIGD T PI   +  A+ + S  + T  G+ GYG EQG   L  +IA   Y  LG  I+E +IFVSDG+KCD   +Q +F ++  +AV DP YP YVD++V+ G+TGE   D  +Y  + YM  T ENGF P
Sbjct:    5 NENYLKLKAGYLFPEISKRVKIYSEKNPSAKIIRLGIGDVTLPIVPSVVDAMVEASKEMGTVGGFHGYGPEQGYSFLLKSIADHDYGSLGIKIDESEIFVSDGSKCDCGNIQEIFSTDSKIAVADPVYPVYVDTNVMAGRTGEIGPDG-RYSNLIYMPATKENGFQP 170          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_LEPIC (LL-diaminopimelate aminotransferase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=dapL PE=1 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.650e-34
Identity = 78/167 (46.71%), Postives = 104/167 (62.28%), Query Frame = 2
Query:  263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG--IEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            N N  KL+AGYLFPEI++R   +  K P A++I LGIGD T PI   +  A+ + S  + T  G+ GYG EQG   L  +IA   Y  LG  I+E +IFVSDG+KCD   +Q +F ++  +AV DP YP YVD++V+ G+TGE   D  +Y  + YM  T ENGF P
Sbjct:    5 NENYLKLKAGYLFPEISKRVKIYSEKNPSAKIIRLGIGDVTLPIVPSVVDAMVEASKEMGTVGGFHGYGPEQGYSFLLKSIADHDYGSLGIKIDESEIFVSDGSKCDCGNIQEIFSTDSKIAVADPVYPVYVDTNVMAGRTGEIGPDG-RYSNLIYMPATKENGFQP 170          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_DESOH (LL-diaminopimelate aminotransferase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=dapL PE=3 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 3.650e-34
Identity = 72/167 (43.11%), Postives = 102/167 (61.08%), Query Frame = 2
Query:  263 NGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG--IEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGFFP 757
            N +  KLQ+ YLF EIA+R  AH   +PD  +I LGIGD T+P+      A  K    + T   + GYG EQG   LR A+A+  Y+  G  I+  ++F+SDGAKCD    Q +F +++ +A+ DP YP Y+D++V+ G+TG F+    +YG I YM CTA+N F P
Sbjct:    5 NEHFLKLQSSYLFSEIAKRVNAHQATHPDQSIIKLGIGDATQPLCPACLDAFHKAVDEMGTASSFRGYGPEQGYAFLREAVAANDYQARGADIQPDEVFISDGAKCDTGNFQELFATDIRVAIPDPVYPVYLDTNVMAGRTGAFENG--RYGNIVYMECTAQNSFLP 169          
BLAST of CK932933 vs. ExPASy Swiss-Prot
Match: DAPAT_SYNPX (LL-diaminopimelate aminotransferase OS=Synechococcus sp. (strain WH8102) GN=dapL PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.226e-34
Identity = 80/168 (47.62%), Postives = 104/168 (61.90%), Query Frame = 2
Query:  254 VSRNGNLGKLQAGYLFPEIARRKAAHMLKYPDAEVISLGIGDTTEPIPEVITSALAKRSYALSTQEGYSGYGAEQGEKPLRAAIASTFYKDLG--IEEGDIFVSDGAKCDISRLQIVFGSNVTMAVQDPSYPAYVDSSVIMGQTGEFQKDAEKYGKIEYMRCTAENGF 751
            V  NGN  KL+AGYLFPEI RR  A     PDA +I LGIGD TEP+P     A+     A+ T EG+ GYG EQG   LR AIA   ++  G  I   +IFVSDG+KCD S +  + G    +AV DP YP YVD++V+ G+TGE  ++  +YG + Y+  +A+NGF
Sbjct:    2 VQVNGNYLKLKAGYLFPEIGRRVKAFSAANPDAALIRLGIGDVTEPLPLACREAMKTAIDAMGTAEGFHGYGPEQGYGWLREAIAKHDFQARGCDISAEEIFVSDGSKCDSSNILDILGEGNRIAVTDPVYPVYVDTNVMAGRTGEAGEEG-RYGGLTYLPISADNGF 168          
The following BLAST results are available for this feature:
BLAST of CK932933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 81
Match NameE-valueIdentityDescription
DAPAT_ARATH1.844e-8678.50LL-diaminopimelate aminotransferase, chloroplastic... [more]
DAPAT_PARUW3.519e-4553.57LL-diaminopimelate aminotransferase OS=Protochlamy... [more]
DAPAT_SYNS35.631e-3548.21LL-diaminopimelate aminotransferase OS=Synechococc... [more]
DAPAT_LEPBL9.606e-3546.71LL-diaminopimelate aminotransferase OS=Leptospira ... [more]
DAPAT_LEPBJ9.606e-3546.71LL-diaminopimelate aminotransferase OS=Leptospira ... [more]
DAPAT_SYNPW1.638e-3448.21LL-diaminopimelate aminotransferase OS=Synechococc... [more]
DAPAT_LEPIN3.650e-3446.71LL-diaminopimelate aminotransferase OS=Leptospira ... [more]
DAPAT_LEPIC3.650e-3446.71LL-diaminopimelate aminotransferase OS=Leptospira ... [more]
DAPAT_DESOH3.650e-3443.11LL-diaminopimelate aminotransferase OS=Desulfococc... [more]
DAPAT_SYNPX6.226e-3447.62LL-diaminopimelate aminotransferase OS=Synechococc... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_G01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_G01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932933 ID=CK932933; Name=CK932933; organism=Citrus sinensis; type=EST; length=758bp
GGGGAGTGACAGAGCACTCGAAAACATCCTGTTTTGGTGGTAGTAATTAG
TTGGTCAAAATTCAGCAAACATGTCGCTAGCTCCTCAATCCATTTCCACG
TCAATGATCTCTTCTTCTTCATCTGCTTTCTTATCCCCATCGAACTTGAA
CTTCAATTCAAGAAGACAGAATGCTTGGGTTCAAGCGAAGAGAATCAGTG
TTTGCAAATGCGTTGCCGCGCCTCAAGAAGAGAAAATTGCATACAAGACA
AAAGTCTCTCGTAATGGAAACTTGGGAAAACTTCAAGCAGGATACCTCTT
TCCAGAGATTGCTCGAAGAAAGGCTGCACACATGCTGAAATACCCAGATG
CAGAAGTGATTAGTCTTGGAATCGGTGACACCACTGAGCCCATTCCCGAA
GTTATAACTTCTGCATTGGCTAAGAGATCTTATGCATTGTCCACACAAGA
GGGCTATAGTGGTTATGGAGCTGAACAAGGTGAAAAGCCATTGAGAGCTG
CAATTGCTTCAACATTTTATAAGGACCTTGGCATAGAGGAAGGCGATATA
TTTGTTTCTGATGGTGCAAAATGTGACATATCCCGCCTTCAGATTGTTTT
TGGTTCTAATGTTACTATGGCAGTTCAAGATCCATCATACCCGGCTTATG
TAGACTCGAGTGTCATTATGGGCCAAACTGGAGAGTTTCAAAAGGATGCC
GAGAAGTACGGAAAGATTGAATACATGAGGTGTACTGCAGAGAATGGTTT
TTTTCCTG
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