CK932940

Overview
NameCK932940
Unique NameCK932940
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length415
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6866 contig Csv1_Contig6866:134..548. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: FL3H_CALCH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Callistephus chinensis GN=FHT PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 4.685e-21
Identity = 54/109 (49.54%), Postives = 76/109 (69.72%), Query Frame = -3
Query:   57 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIG 377
            R V +EY K L+ L+ +L++ LS  +G+ ++ L  A    ++   + VN+YPKCPQPDLTLGL  H+DPG +TLLL D QV GLQ  +  G++WITVKP + AF+VN+G
Sbjct:  152 RAVTEEYSKVLMGLACKLLEVLSEAMGLEKEALTKACV--DMDQKVVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDGGESWITVKPVEGAFVVNLG 257          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: FL3H_MATIN (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Matthiola incana GN=FHT PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.044e-20
Identity = 52/108 (48.15%), Postives = 77/108 (71.30%), Query Frame = -3
Query:   57 EVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIG 374
            +V +EY ++L+ L+ +L++ LS  +G+ ++ L NA    ++   + VN+YPKCPQPDLTLGL  H+DPG +TLLL D QV GLQ  +  G+ WITV+P + AF+VN+G
Sbjct:  154 KVTEEYSEKLMGLACKLLEVLSEAMGLEKESLTNACV--DMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDDGNTWITVQPVEGAFVVNLG 258          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.780e-20
Identity = 52/108 (48.15%), Postives = 75/108 (69.44%), Query Frame = -3
Query:   57 EVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIG 374
            +V +EY + L+ L+ +L++ LS  +G+ ++ L NA    ++   + VN+YPKCPQPDLTLGL  H+DPG +TLLL D QV GLQ  +  G  WITV+P + AF+VN+G
Sbjct:  155 KVTEEYSERLMSLACKLLEVLSEAMGLEKESLTNACV--DMDQKIVVNYYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDNGKTWITVQPVEGAFVVNLG 259          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.037e-20
Identity = 49/115 (42.61%), Postives = 73/115 (63.48%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGD---NIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            REV+ ++ K L +L+  L+  L  NLG+ +  L+NAF G    N G   +V+ YP CP+PDL  GL +H+D GG+ LL  D +V+GLQ+ K + WI V P +H+ +VN+G   +V
Sbjct:  111 REVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGT--KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEV 223          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 3.037e-20
Identity = 49/115 (42.61%), Postives = 73/115 (63.48%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGD---NIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            REV+ ++ K L +L+  L+  L  NLG+ +  L+NAF G    N G   +V+ YP CP+PDL  GL +H+D GG+ LL  D +V+GLQ+ K + WI V P +H+ +VN+G   +V
Sbjct:  111 REVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGT--KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDEQWIDVPPMRHSIVVNLGDQLEV 223          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: FL3H_VITVI (Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis vinifera GN=F3H PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.966e-20
Identity = 53/109 (48.62%), Postives = 74/109 (67.89%), Query Frame = -3
Query:   57 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIG 377
            R V  EY ++L+ L+ +L++ LS  + + +D L NA    ++   + VNFYP+CPQPDLTLGL  H+DPG +TLLL D QV GLQ  +  G  WITV+P + AF+VN+G
Sbjct:  155 RSVTQEYSEKLMGLACKLLEVLSEAMDLDKDALTNACV--DMDQKVVVNFYPQCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDGGKTWITVQPVEGAFVVNLG 260          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: FLS_PETCR (Flavonol synthase/flavanone 3-hydroxylase OS=Petroselinum crispum GN=FLS PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.180e-20
Identity = 45/112 (40.18%), Postives = 74/112 (66.07%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            RE  +EY   L  +  +L +ALS+ +G+ +  L+ A GGD++   L++N+YP CP+PDL LG+ +H+D   +T+L+P ++V GLQV K D+W  VK   +A I++IG   ++
Sbjct:  158 REANEEYAVALRGVVDKLFEALSLGIGLEKHELKKASGGDDLIYMLKINYYPPCPRPDLALGVVAHTDMSAITILVP-NEVQGLQVHKDDHWYDVKYIPNALIIHIGDQIEI 268          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.766e-20
Identity = 54/109 (49.54%), Postives = 72/109 (66.06%), Query Frame = -3
Query:   57 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGDNIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRK--GDNWITVKPAKHAFIVNIG 377
            REV  +Y  EL+ L+ +L+  LS  +G+  + L  A    ++   + VNFYPKCPQPDLTLGL  H+DPG +TLLL D QV GLQ  +  G  WITV+P + AF+VN+G
Sbjct:  155 REVTKKYSDELMGLACKLLGVLSEAMGLDTEALTKACV--DMDQKVVVNFYPKCPQPDLTLGLKRHTDPGTITLLLQD-QVGGLQATRDDGKTWITVQPVEGAFVVNLG 260          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.766e-20
Identity = 48/115 (41.74%), Postives = 72/115 (62.61%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGD---NIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            REV+ ++ K L +L+  L+  L  NLG+ +  L+ AF G    N G   +V+ YP CP+PDL  GL +H+D GG+ LL  D +V+GLQ+ K D WI V P +H+ ++N+G   +V
Sbjct:  111 REVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGT--KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDDQWIDVPPMRHSIVINLGDQLEV 223          
BLAST of CK932940 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.766e-20
Identity = 49/115 (42.61%), Postives = 72/115 (62.61%), Query Frame = -3
Query:   42 REVIDEYCKELVRLSGRLMKALSINLGISEDRLQNAFGGD---NIGACLRVNFYPKCPQPDLTLGLSSHSDPGGLTLLLPDHQVTGLQVRKGDNWITVKPAKHAFIVNIGXXXQV 377
            REV+ ++ K L +L+  L+  L  NLG+ +  L+NAF G    N G   +V+ YP CP+PDL  GL +H+D GG+ LL  D +V+GLQ+ K   WI V P +H+ +VN+G   +V
Sbjct:  111 REVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGT--KVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEV 223          
The following BLAST results are available for this feature:
BLAST of CK932940 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
FL3H_CALCH4.685e-2149.54Naringenin,2-oxoglutarate 3-dioxygenase OS=Callist... [more]
FL3H_MATIN1.044e-2048.15Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FL3H_ARATH1.780e-2048.15Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
ACCO4_SOLLC3.037e-2042.611-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
ACCO1_SOLLC3.037e-2042.611-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
FL3H_VITVI3.966e-2048.62Naringenin,2-oxoglutarate 3-dioxygenase OS=Vitis v... [more]
FLS_PETCR5.180e-2040.18Flavonol synthase/flavanone 3-hydroxylase OS=Petro... [more]
FL3H_MALDO6.766e-2049.54Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
ACCO4_PETHY6.766e-2041.741-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO1_PETHY6.766e-2042.611-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_G09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_G09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932940 ID=CK932940; Name=CK932940; organism=Citrus sinensis; type=EST; length=415bp
GGGGAAAAAAAAGACCATAAATTAGGAAGTAATAAATAACTCACCTGAAN
NNNNTCGCCAATGTTGACGATGAAAGCATGCTTGGCCGGCTTCACGGTGA
TCCAATTATCGCCTTTGCGGACTTGAAGACCGGTGACTTGATGGTCCGGC
AAGAGTAGGGTCAAGCCGCCGGGGTCCGAATGCGACGACAAGCCAAGTGT
TAAGTCGGGCTGCGGACACTTTGGATAAAAATTAACCCTCAAACAGGCTC
CAATATTATCACCACCAAATGCATTCTGTAATCGATCTTCGCTTATTCCA
AGATTAATCGATAAAGCCTTCATTAACCTCCCACTTAGTCGCACCAATTC
CTTGCAGTACTCATCAATCACCTCCCTAATTGAAACAAAAAAAAAAAAAA
AAAAAAAAAAAAAAA
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