CK932976

Overview
NameCK932976
Unique NameCK932976
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length717
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig888 contig Csv1_Contig888:59..775. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS14_LUPLU (40S ribosomal protein S14 OS=Lupinus luteus GN=RPS14 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 5.025e-59
Identity = 119/139 (85.61%), Postives = 122/139 (87.77%), Query Frame = 2 
Query:   26 MSRRKNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            MSRRK R+ KEE VTLGPAV DGEHVFGVA IFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDV+TRCKELGITALHIKLRA            AQSALRALARSGMKIGRIEDVTPIP+DST
Sbjct:    1 MSRRKVRDTKEETVTLGPAVSDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVATRCKELGITALHIKLRATGGNKTKTPGRGAQSALRALARSGMKIGRIEDVTPIPSDST 139
[Close]
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS143_ARATH (40S ribosomal protein S14-3 OS=Arabidopsis thaliana GN=RPS14C PE=2 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 6.563e-59
Identity = 115/139 (82.73%), Postives = 122/139 (87.77%), Query Frame = 2 
Query:   26 MSRRKNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            MS+RK +EPK ENVTLGPAVR+GE VFGV H+FASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDV+ RCKELGITA+H+KLRA            AQSALRALARSGMKIGRIEDVTPIPTDST
Sbjct:    1 MSKRKTKEPKVENVTLGPAVREGEQVFGVVHVFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITAIHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDST 139
[Close]
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS141_MAIZE (40S ribosomal protein S14 OS=Zea mays PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.119e-58
Identity = 119/139 (85.61%), Postives = 122/139 (87.77%), Query Frame = 2 
Query:   26 MSRRKNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            MSRRK REPKEENV LGP VR+GE VFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDV+ RCKELGITALHIKLRA            AQSALRALARSGMKIGRIEDVTP+PTDST
Sbjct:    1 MSRRKTREPKEENV-LGPTVREGEFVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDST 138
[Close]
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS142_MAIZE (40S ribosomal protein S14 OS=Zea mays PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.909e-58
Identity = 117/137 (85.40%), Postives = 122/137 (89.05%), Query Frame = 2 
Query:   32 RRKNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            R+K REPKEENV LGPAVR+GEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLA+QDV+ RCKELGITALHIKLRA            AQSALRALARSGMKIGRIEDVTP+PTDST
Sbjct:    4 RKKTREPKEENV-LGPAVREGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLASQDVAQRCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPVPTDST 139
[Close]
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS142_ARATH (40S ribosomal protein S14-2 OS=Arabidopsis thaliana GN=RPS14B PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 5.556e-58
Identity = 114/139 (82.01%), Postives = 121/139 (87.05%), Query Frame = 2 
Query:   26 MSRRKNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            MS+RK +EPK E VTLGP+VR+GE VFGV HIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDV+ RCKELGITA+H+KLRA            AQSALRALARSGMKIGRIEDVTPIPTDST
Sbjct:    1 MSKRKTKEPKVETVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDST 139
[Close]
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS141_ARATH (40S ribosomal protein S14-1 OS=Arabidopsis thaliana GN=RPS14A PE=2 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.757e-57
Identity = 113/139 (81.29%), Postives = 121/139 (87.05%), Query Frame = 2 
Query:   26 MSRRKNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            MS+RK +EPK + VTLGP+VR+GE VFGV HIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDV+ RCKELGITA+H+KLRA            AQSALRALARSGMKIGRIEDVTPIPTDST
Sbjct:    1 MSKRKTKEPKVDVVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPTDST 139
[Close]
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS14_PODCA (40S ribosomal protein S14 OS=Podocoryne carnea GN=RPS14 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.416e-53
Identity = 106/140 (75.71%), Postives = 118/140 (84.29%), Query Frame = 2 
Query:   26 MSRRKNREPKEENV-TLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            M+ RK + PKEE V +LGP V DGE+VFGVAHIFASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDESSPYAAMLAAQDV+ RCKE+GITALH+KLRA            AQSALRALARSGMKIGRIEDVTPIP+D T
Sbjct:    1 MAPRKGKAPKEEQVISLGPQVADGENVFGVAHIFASFNDTFVHVTDLSGKETIARVTGGMKVKADRDESSPYAAMLAAQDVAVRCKEIGITALHVKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDCT 140
[Close]
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS14_CHLRE (40S ribosomal protein S14 OS=Chlamydomonas reinhardtii GN=RPS14 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 2.416e-53
Identity = 106/135 (78.52%), Postives = 115/135 (85.19%), Query Frame = 2 
Query:   38 KNREPKEENVTLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            K  E  +E V+LGP VR+GEHVFGVAHIFASFNDTF+HVTDLSGRET+ R+TGGMKVKADRDESSPYAAMLAAQDV+ +CKELGITALHIKLRA            AQSALRALAR+GMKIGRIEDVTPIPTDST
Sbjct:    8 KGDEAPKEVVSLGPTVREGEHVFGVAHIFASFNDTFVHVTDLSGRETISRVTGGMKVKADRDESSPYAAMLAAQDVAQKCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARAGMKIGRIEDVTPIPTDST 142
[Close]
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS14_MOUSE (40S ribosomal protein S14 OS=Mus musculus GN=Rps14 PE=2 SV=3)

HSP 1 Score: 207.223 bits (526), Expect = 7.028e-53
Identity = 107/140 (76.43%), Postives = 118/140 (84.29%), Query Frame = 2 
Query:   26 MSRRKNREPKEENV-TLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            M+ RK +E KEE V +LGP V +GE+VFGV HIFASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDESSPYAAMLAAQDV+ RCKELGITALHIKLRA            AQSALRALARSGMKIGRIEDVTPIP+DST
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140
[Close]
BLAST of CK932976 vs. ExPASy Swiss-Prot
Match: RS14_HUMAN (40S ribosomal protein S14 OS=Homo sapiens GN=RPS14 PE=1 SV=3)

HSP 1 Score: 207.223 bits (526), Expect = 7.028e-53
Identity = 107/140 (76.43%), Postives = 118/140 (84.29%), Query Frame = 2 
Query:   26 MSRRKNREPKEENV-TLGPAVRDGEHVFGVAHIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVSTRCKELGITALHIKLRAXXXXXXXXXXXXAQSALRALARSGMKIGRIEDVTPIPTDST 442
            M+ RK +E KEE V +LGP V +GE+VFGV HIFASFNDTF+HVTDLSG+ET+ R+TGGMKVKADRDESSPYAAMLAAQDV+ RCKELGITALHIKLRA            AQSALRALARSGMKIGRIEDVTPIP+DST
Sbjct:    1 MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDST 140
The following BLAST results are available for this feature:
BLAST of CK932976 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 169
Match NameE-valueIdentityDescription
RS14_LUPLU5.025e-5985.6140S ribosomal protein S14 OS=Lupinus luteus GN=RPS... [more]
RS143_ARATH6.563e-5982.7340S ribosomal protein S14-3 OS=Arabidopsis thalian... [more]
RS141_MAIZE1.119e-5885.6140S ribosomal protein S14 OS=Zea mays PE=3 SV=1[more]
RS142_MAIZE1.909e-5885.4040S ribosomal protein S14 OS=Zea mays PE=3 SV=1[more]
RS142_ARATH5.556e-5882.0140S ribosomal protein S14-2 OS=Arabidopsis thalian... [more]
RS141_ARATH2.757e-5781.2940S ribosomal protein S14-1 OS=Arabidopsis thalian... [more]
RS14_PODCA2.416e-5375.7140S ribosomal protein S14 OS=Podocoryne carnea GN=... [more]
RS14_CHLRE2.416e-5378.5240S ribosomal protein S14 OS=Chlamydomonas reinhar... [more]
RS14_MOUSE7.028e-5376.4340S ribosomal protein S14 OS=Mus musculus GN=Rps14... [more]
RS14_HUMAN7.028e-5376.4340S ribosomal protein S14 OS=Homo sapiens GN=RPS14... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_D01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_D01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932976 ID=CK932976; Name=CK932976; organism=Citrus sinensis; type=EST; length=717bp
GGGTCCATCTCGTGTCTTCGCAGGCATGTCGAGGAGAAAGAATAGGGAGC
CTAAGGAAGAGAATGTGACTCTAGGACCTGCTGTGAGAGATGGGGAGCAT
GTTTTTGGAGTTGCCCACATCTTTGCATCGTTCAATGATACATTTATTCA
TGTGACTGATCTGTCAGGCAGAGAAACCCTTGTCCGTATCACTGGTGGTA
TGAAGGTGAAAGCTGACCGAGATGAGTCCTCTCCATACGCTGCCATGCTT
GCAGCACAAGATGTTTCAACCAGATGCAAGGAGCTTGGAATCACTGCTCT
TCATATTAAGCTGCGTGCTACTGGTGGGAACAAAACCAAAACACCTGGTC
CAGGTGCCCAGTCTGCTCTTCGTGCCCTTGCTCGTTCTGGGATGAAAATT
GGTCGCATAGAGGATGTGACCCCTATTCCCACTGATAGCACACGCAGAAA
GGGTGGTAGAAGAGGAAGAAGGCTTTAAGCTGTGTTGTTTGTCCGATTGT
CTTGTTTTATGCGGGCATTCTGAATGGGACAGTTGTTCCTTAAAGTTAGT
TGAAGTTACTTTTCAATTTTGGAACTAATTTATAGTTTTATCTGTCGCTA
TTAAAAGATTTTATTTTCCTGCTTTTTGTAAAAACAATAGGCGGCCTTGA
GAGCATATGGCATTACTGGTGTCTTGCATTGCGTGTTGAAAAAAAAAAAA
AAAAAAAAAAAAAAAAA
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