CK932980

Overview
NameCK932980
Unique NameCK932980
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK932980 vs. ExPASy Swiss-Prot
Match: ALIX_DICDI (ALG-2 interacting protein X OS=Dictyostelium discoideum GN=alxA PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.954e-21
Identity = 72/262 (27.48%), Postives = 130/262 (49.62%), Query Frame = 1
Query:   52 EDAQFRSQFGTRWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDARIERSVRDH-SALMSILDRRPIESALPTLARPIMSLDATEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSAGSYEDLFRKEISKYDHICXXXXXXXXXXXXLLMQIQAQNEEFSAIFNLEDYKAS-REKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEGVQRQMAGLNFQDRKTSGS 831
            ED   R+ +G +W R  S TLT NL     ++  +L+ + +SD+ I +   DH +++  + ++  I + LPT      +L + + A + +L   +  L+ L A R  + + LK + +KDDI  KL++       ++ +EI KY+ +             L+  I+ +NE+F+   N +  + + RE+  ++   A   Y E+K N++EG +FY+  Q+ +     +C DF   R     E IE  ++  AG+N     TS S
Sbjct:  456 EDNLMRATYGAQWHRTPSYTLTANLTQDYAKYTSHLQHSTKSDSFIRKKFEDHKNSIQELENQTEIIALLPT-----NNLPSGKIAEIASLTVLMNDLDALMANRESIAEKLKNLCKKDDITLKLLSPQKDKSLIYAEEIQKYEPLQMSLNESFLKQQKLIEDIRKENEKFT---NQKSKQGNQREEILQKYANAYKVYNELKANLDEGTQFYLNFQEILNKFLNRCKDFTTGRE---NEKIELKRQIEAGVNPHSPLTSPS 706          
BLAST of CK932980 vs. ExPASy Swiss-Prot
Match: PDC6I_RAT (Programmed cell death 6-interacting protein OS=Rattus norvegicus GN=Pdcd6ip PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.311e-17
Identity = 67/255 (26.27%), Postives = 122/255 (47.84%), Query Frame = 1
Query:   55 DAQFRSQFGTRWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDARIERSVRDHSALMSILDRRPIE--SALPTLARPIMSLDATEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSAG-----SYEDLFRKEISK-YDHICXXXXXXXXXXXXLLMQIQAQNEEFSAIFNLEDYKASREKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEGVQRQMA 795
            D   R++F  RW R  S+ L K L+    +F   L +A ++D +++   + H   +++L +   E  +A+P+ A P  ++  +E  +V  LK  L  L+ +  +R GLE+ LK +    D+  K +T+       + E L   E+ + Y  +             LL  IQ  ++EFS +       + RE+  K +  A   + E+  N+ EG KFY  L + +   + +CSD V  R  +  E+++ +Q+ +A
Sbjct:  470 DNDLRAKFKDRWQRTPSNDLYKPLRAEGAKFRAVLDKAVQADGQVKERYQSHRDTIALLCKPEPELNAAIPS-ANPAKTMQGSE--VVNVLKSLLSNLDEIKKEREGLENDLKSVNF--DMTSKFLTALAQDGVINEEALSVTELDRIYGGLTTKVQESLKKQEGLLKNIQVSHQEFSKMKQSNSEASLREEVLKNLATAYDNFVELVANLKEGTKFYNELTEILVRFQNKCSDIVFARKTERDELLKDLQQSIA 719          
BLAST of CK932980 vs. ExPASy Swiss-Prot
Match: PALA_CRYNE (pH-response regulator protein palA/RIM20 OS=Cryptococcus neoformans GN=RIM20 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.311e-17
Identity = 70/249 (28.11%), Postives = 108/249 (43.37%), Query Frame = 1
Query:   91 TRPQSSTLTKNLQDRLNRFAGNLKQAAESDARIERSVRDHSALMSIL--DRRPIESALPTLARPIMSLDATEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSAGS-------------YEDLFRKEISKYDHICXXXXXXXXXXXXLLMQIQAQNEEFSAIFNLEDYKASREKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEGVQRQM 792
            TR  S    + L     ++   +KQA  SDA +     + + L+ IL      +E  +P    P  SL  +    V  L+ SL +L+   A RA L    +++   DDI P+++  A               +EDLF K + KY  +             LL QI+ QNE F +    +     RE+  + +  A  K+REI +N  EG+KFY +  + +   K  C  F+ TR I   +M    Q+QM
Sbjct:  502 TRQPSHVANQPLIQMAEQYEATIKQAGGSDATVRAKWEEWARLVGILAAGEMEMEDYVPGTTSPSGSLPPS----VRPLRASLEELDDRIAHRARLVREARQISAADDIRPEVLKEAAKLAHGGSGDVKTEWFEDLFEKGLEKYMGVKREMDEEVAKHDELLEQIRTQNESFLSERKDDPIIKERERRLQDMDLAYWKWREIVDNAEEGIKFYNSFAEMLHGFKAACGQFLNTRRIDVGQMTTQFQQQM 746          
BLAST of CK932980 vs. ExPASy Swiss-Prot
Match: PDC6I_MOUSE (Programmed cell death 6-interacting protein OS=Mus musculus GN=Pdcd6ip PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 8.498e-17
Identity = 65/255 (25.49%), Postives = 121/255 (47.45%), Query Frame = 1
Query:   55 DAQFRSQFGTRWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDARIERSVRDHSALMSILDRRP--IESALPTLARPIMSLDATEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSAG-----SYEDLFRKEISK-YDHICXXXXXXXXXXXXLLMQIQAQNEEFSAIFNLEDYKASREKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEGVQRQMA 795
            D   R++F  RW R  S+ L K L+    +F   L +A ++D +++   + H   +++L +    + +A+P+ A P  ++  +E  +V  LK  L  L+ +  +R  LE+ LK +    D+  K +T+       + E L   E+ + Y  +             LL  IQ  ++EFS +    +    RE+  K +  A   + E+  N+ EG KFY  L + +   + +CSD V  R  +  E+++ +Q+ +A
Sbjct:  465 DNDLRAKFKDRWQRTPSNDLYKPLRAEGAKFRAVLDKAVQADGQVKERYQSHRDTIALLCKPEPEVNAAIPS-ANPAKTMQGSE--VVSVLKSLLSNLDEIKKERESLENDLKSVNF--DMTSKFLTALAQDGVINEEALSVTELDRIYGGLTSKVQESLKKQEGLLKNIQVSHQEFSKMKQSNNEANLREEVLKNLATAYDNFVELVANLKEGTKFYNELTEILVRFQNKCSDIVFARKTERDELLKDLQQSIA 714          
BLAST of CK932980 vs. ExPASy Swiss-Prot
Match: PDC6I_HUMAN (Programmed cell death 6-interacting protein OS=Homo sapiens GN=PDCD6IP PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.110e-16
Identity = 67/255 (26.27%), Postives = 120/255 (47.06%), Query Frame = 1
Query:   55 DAQFRSQFGTRWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDARIERSVRDHSALMSILDRRPIE--SALPTLARPIMSLDATEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSAG-----SYEDLFRKEISK-YDHICXXXXXXXXXXXXLLMQIQAQNEEFSAIFNLEDYKASREKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEGVQRQMA 795
            D   R++F  RW R  S+ L K L+     F   L +A ++D +++   + H   + +L +   E  +A+P+ A P  ++  +E  +V  LK  L  L+ +  +R GLE+ LK +    D+  K +T+       + E L   E+ + Y  +             LL  IQ  ++EFS +    +    RE+  K +  A   + E+  N+ EG KFY  L + +   + +CSD V  R  +  E+++ +Q+ +A
Sbjct:  465 DNDLRAKFKERWQRTPSNELYKPLRAEGTNFRTVLDKAVQADGQVKECYQSHRDTIVLLCKPEPELNAAIPS-ANPAKTMQGSE--VVNVLKSLLSNLDEVKKEREGLENDLKSVNF--DMTSKFLTALAQDGVINEEALSVTELDRVYGGLTTKVQESLKKQEGLLKNIQVSHQEFSKMKQSNNEANLREEVLKNLATAYDNFVELVANLKEGTKFYNELTEILVRFQNKCSDIVFARKTERDELLKDLQQSIA 714          
BLAST of CK932980 vs. ExPASy Swiss-Prot
Match: PALA_ASPOR (pH-response regulator protein palA/RIM20 OS=Aspergillus oryzae GN=palA PE=3 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 4.217e-16
Identity = 66/259 (25.48%), Postives = 104/259 (40.15%), Query Frame = 1
Query:   52 EDAQFRSQFGT-RWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDARIERSVRDHSALMSILD--RRPIESALPTLARPIMSLDATEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDI--------------LPKLMTSAGSYEDLFRKEISKYDHICXXXXXXXXXXXXLLMQIQAQNEEFSAIFNLEDYKASREKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEG 777
            ED   R ++GT RW R  S      L        G    A  SD  +E+ +RD  A+  +L    R +E  +P+  R  +  +   ++I   L+  L ++  L  +R      LK+  R DDI               P     A  +EDLF +++  YD               +  Q++  N  F+     +     REK  ++++    KY+EI  NI  G KFY  L   +   +  C  FV  R ++  + IEG
Sbjct:  470 EDDSSRRKYGTDRWAREPSEAAASKLYTTAREIDGYFSSAQSSDNLVEQKLRDSEAVFRVLTGTNRDLEMYVPSSRRAAIPPEVERESI--RLRGCLSEVSRLENRRKRRAQALKDKARTDDISKLQGWEAARLEREFPMQAIQASQFEDLFEEQLHLYDTDLEMVTQEQHEQDQISAQVREANRAFTRAHTGDASTKEREKALQELENGYLKYKEIISNIEVGRKFYNDLAKIVGRFRDDCKAFVHQRRMEASQ-IEG 725          
BLAST of CK932980 vs. ExPASy Swiss-Prot
Match: PALA_EMENI (pH-response regulator protein palA/RIM20 OS=Emericella nidulans GN=palA PE=1 SV=3)

HSP 1 Score: 83.1889 bits (204), Expect = 2.093e-15
Identity = 65/270 (24.07%), Postives = 107/270 (39.63%), Query Frame = 1
Query:   52 EDAQFRSQFGT-RWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDARIERSVRDHSALMSILD--RRPIESALPTLARPIMSLDATEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDI--------------LPKLMTSAGSYEDLFRKEISKYDHICXXXXXXXXXXXXLLMQIQAQNEEFSAIFNLEDYKASREKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEGVQ--RQMAGLN 804
            ED   R +FGT RWTR  S      L        G    A  SD  +E+ + D  A+  +L    R +E+ +P+  R  +  +   +  V  L+  + ++  L ++R      +K+  R DDI               P     A  +EDLF   +  YD               ++ Q++  N  F+     +     REK  ++++    KY+EI  NI  G KFY  L   +   +     FV  R ++  ++ + +     MA LN
Sbjct:  470 EDDASRRKFGTDRWTREASEAAAPKLYTTAREIDGYFTSAQSSDNLVEQKLHDSEAVFRVLTGTNRDLEAFVPSSRRATIPPEVERE--VSRLRSCISEVNRLESRRKRKAQAVKDKARADDISSALVREAARLEREFPMQAIQASQFEDLFESRLRDYDVDLDMVAQEMHDQDQIVAQVRDANRAFTRAHTGDASTKEREKALQELENGYLKYKEIISNIEVGRKFYNDLAKIVGRFRDDVKAFVHKRRMEASQLEQDISSVAAMASLN 737          
BLAST of CK932980 vs. ExPASy Swiss-Prot
Match: PDC6I_XENLA (Programmed cell death 6-interacting protein OS=Xenopus laevis GN=pdcd6ip PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.734e-15
Identity = 66/255 (25.88%), Postives = 116/255 (45.49%), Query Frame = 1
Query:   55 DAQFRSQFGTRWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDARIERSVRDHSALMSILDRRPIE--SALPTLARPIMSLDATEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSAGSYEDLFRKEISK------YDHICXXXXXXXXXXXXLLMQIQAQNEEFSAIFNLEDYKASREKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEGVQRQMA 795
            D   +++F  RW R  S+ L K L+   + F   L +A  +DA ++   + H   + IL +   E  +A+P+ A P  ++  +E  +V  LK  L +L+ +  +R  LE+ +K +    D+  K +T+      +  + IS       Y                LL  IQ+ ++EFS +         RE+  K +      Y E+  N+ EG KFY  L D +   + +CSD V  R  +  E+++ +Q+ +A
Sbjct:  464 DNDLKAKFKDRWQRTPSTELYKPLRSEGSNFRNVLDKAIGADAVVKERYQSHREAIVILCKPEAELNAAIPS-ANPAKTMQGSE--VVTVLKSLLNKLDDMKKEREQLENDIKSVNF--DMTTKFLTALAQDGAVNEEAISVTELDQIYGSYTYKVQENLKKQEDLLNNIQSAHQEFSKMKQSNSEANLREEVLKNLAVGHDNYIELVANLKEGTKFYNDLTDILLKFQCKCSDIVFARKTERDELLKDIQQSIA 713          
BLAST of CK932980 vs. ExPASy Swiss-Prot
Match: PALA_YARLI (pH-response regulator protein RIM20 OS=Yarrowia lipolytica GN=RIM20 PE=3 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.772e-14
Identity = 65/285 (22.81%), Postives = 119/285 (41.75%), Query Frame = 1
Query:   49 TEDAQFRSQFGTRWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDARIERSVRDHSALMSILD--RRPIESALPTLARPIMSLDATEDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDILP---------------KLMTSAGSYEDLFRKEISKYDHICXXXXXXXXXXXXLLMQIQAQNEEFSAIFNLEDYKASREKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEGVQRQMAGLNFQDRKTSGSYDGSYPT 852
            +ED   R +  + WTR  S     +L  RL      L  A  SD  +   + +   L+SIL+  R  +E+ LP+    + S +      V  L+  L  LE+L  +RA   D L   ++ DDI P                L  +   +E +  KE+ KY                +L ++   N++F +  ++ D    RE   + ++ A   Y+E K++++ G  FY  L   I+   + C  FV  R ++   +    + +++ ++  + + SG +  +  T
Sbjct:  470 SEDEMLRRKNNSGWTRFDSKEAGAHLYTRLAELEQYLADAGASDKLVRGKLDEIDYLLSILNSGRSALENYLPSSVSGVRSPEVKRQ--VPHLRDLLNNLESLEIKRAQYMDRLSLKQQNDDIEPVLEYHMNKLIREKHANLRLTLADFEPITSKELEKYTVDQDWASEQKELQEEVLEKLDVANKDFRSSLDMNDAAIHRENAIQSLEVAYFSYQEQKDHLDAGRNFYNQLLGEISIFHKNCKQFVYERKMEGASL----EHELSSMHLSEHEHSGGHSDTSST 748          
BLAST of CK932980 vs. ExPASy Swiss-Prot
Match: ALX1_CAEEL (Apoptosis-linked gene 2-interacting protein X 1 OS=Caenorhabditis elegans GN=alx-1 PE=2 SV=3)

HSP 1 Score: 79.7221 bits (195), Expect = 2.314e-14
Identity = 68/251 (27.09%), Postives = 109/251 (43.43%), Query Frame = 1
Query:   55 DAQFRSQFGTRWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDARIERSVRDHSALMSILDRRPIESALPTLARPIMSLDAT-EDAIVGALKQSLRQLETLGAQRAGLEDMLKEMKRKD-DILPKLMTSAGSYEDLFRKEISK------YDHICXXXXXXXXXXXXLLMQIQAQNEEFSAIFNLEDYKASREKCYKQIQAAIAKYREIKENINEGLKFYVTLQDAITNIKQQCSDFVMTRNIQCREMIEGVQ 783
            D   R Q GT+WTR  S  LT  L   + ++ G L  A+ +D  ++     H   + +L +   ES L + + P  +  AT E   V  L+Q + Q   +   R  LE   KE+K  + DI    + +    + +  + ISK      +  +             L+ QIQA N  F+         A RE+  K +  A   Y E+K N+ EG KFY  L   +  ++Q+ SDF   R  +  +++  +Q
Sbjct:  472 DDTMRKQLGTKWTRMSSEQLTGPLVTEIGKYRGILHTASNADKMVKEKFESHRQGIELLSKN--ESELRS-SIPGQTAHATGETDTVRQLRQFMSQWNEVTTDRELLE---KELKNTNCDIANDFLKAMAENQLINEEHISKEKIAQIFGDLKRRVQSSLDTQETLMNQIQAANNTFTGEKTGSSTGAERERILKMLAQASDAYVELKANLEEGTKFYNDLTPILVRLQQKVSDFAFARQTEKEDLMRQLQ 716          
The following BLAST results are available for this feature:
BLAST of CK932980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
ALIX_DICDI1.954e-2127.48ALG-2 interacting protein X OS=Dictyostelium disco... [more]
PDC6I_RAT1.311e-1726.27Programmed cell death 6-interacting protein OS=Rat... [more]
PALA_CRYNE1.311e-1728.11pH-response regulator protein palA/RIM20 OS=Crypto... [more]
PDC6I_MOUSE8.498e-1725.49Programmed cell death 6-interacting protein OS=Mus... [more]
PDC6I_HUMAN1.110e-1626.27Programmed cell death 6-interacting protein OS=Hom... [more]
PALA_ASPOR4.217e-1625.48pH-response regulator protein palA/RIM20 OS=Asperg... [more]
PALA_EMENI2.093e-1524.07pH-response regulator protein palA/RIM20 OS=Emeric... [more]
PDC6I_XENLA2.734e-1525.88Programmed cell death 6-interacting protein OS=Xen... [more]
PALA_YARLI1.772e-1422.81pH-response regulator protein RIM20 OS=Yarrowia li... [more]
ALX1_CAEEL2.314e-1427.09Apoptosis-linked gene 2-interacting protein X 1 OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004349_B11 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IIIF_B11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932980 ID=CK932980; Name=CK932980; organism=Citrus sinensis; type=EST; length=863bp
GGGCAGGAATTGCTGGTGTAGACTGAGGAACTTTTGCAGAAAGAAGCAAC
AGAAGATGCTCAATTCAGAAGCCAATTTGGAACTCGATGGACTAGGCCAC
AGTCCAGCACTCTAACAAAGAACTTGCAAGATAGGTTAAATAGATTTGCT
GGAAACTTAAAGCAAGCCGCCGAAAGTGATGCCCGAATTGAGCGTTCAGT
GAGAGATCATTCTGCACTCATGTCAATCCTTGATCGCCGTCCCATAGAAT
CGGCCCTTCCTACTTTGGCTAGGCCAATAATGTCTTTGGATGCCACTGAG
GATGCTATTGTTGGGGCTCTGAAGCAAAGCTTGAGGCAATTGGAGACTCT
TGGTGCTCAAAGGGCAGGTCTTGAAGACATGCTCAAAGAGATGAAAAGAA
AGGATGACATTCTACCAAAGTTGATGACCTCTGCTGGATCATATGAGGAT
CTCTTCAGGAAGGAGATATCAAAATATGATCACATTTGTGAAGAAATTGC
CCAAAATATCGAGGCACAGGAACAATTGCTGATGCAAATTCAGGCTCAAA
ATGAAGAGTTCTCTGCCATCTTTAATCTTGAAGACTATAAAGCATCTCGA
GAGAAGTGTTATAAGCAAATTCAAGCTGCCATAGCTAAGTATCGAGAAAT
TAAAGAAAACATTAATGAGGGATTGAAGTTTTATGTTACTCTTCAGGATG
CAATCACAAATATCAAGCAGCAATGCAGTGACTTTGTGATGACTAGAAAC
ATCCAGTGCCGAGAAATGATTGAAGGTGTACAGAGACAGATGGCAGGTCT
TAATTTTCAGGATCGTAAAACCTCAGGTTCGTATGATGGCAGCTATCCTA
CAGTTGGACAACC
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