CK933015
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933015 vs. ExPASy Swiss-Prot
Match: ACP1_CASGL (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca GN=ACP1 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 3.430e-35 Identity = 89/139 (64.03%), Postives = 95/139 (68.35%), Query Frame = 3 Query: 129 MASVTGTSACMTSLSCSFKQTQVGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETKS 545 MASVTGTS M S S ++V GKSF LRMRSA RF V CAAKPETV+KVC IVKKQLALP D+ VTGESKFA LGADSLDTVEIVMGL SAQ+I+TVQDAADLIEKLIE KS Sbjct: 1 MASVTGTSISMASFKASLAPSRVSNLRSVSLPIK---GKSFAPLRMRSA-RFVVCCAAKPETVEKVCAIVKKQLALPDDSAVTGESKFATLGADSLDTVEIVMGLEEEFGINVEEESAQSIATVQDAADLIEKLIEKKS 135
BLAST of CK933015 vs. ExPASy Swiss-Prot
Match: ACP4_CUPLA (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata GN=ACL1 PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.323e-30 Identity = 78/137 (56.93%), Postives = 86/137 (62.77%), Query Frame = 3 Query: 132 ASVTGTSACMTSLSCSFKQTQVGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 542 ++ G S C+ S SCS GR KSFPSLR RVSC AKPETV KVC+IVKKQLALP D+ V G SKF+ALGADSLDTVEIVMGL SAQ+I TVQDAADLIEKL+E K Sbjct: 3 SAAAGASICIKSASCS--PLAPGRISSLRSVSLPVSRKSFPSLRSSKGSFARVSCQAKPETVAKVCRIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 137
BLAST of CK933015 vs. ExPASy Swiss-Prot
Match: ACP1_CUPLA (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata GN=ACL1.1 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.823e-28 Identity = 77/138 (55.80%), Postives = 87/138 (63.04%), Query Frame = 3 Query: 132 ASVTGTSACMTSLSCSFKQTQVGRXXXXXXXXXXXXGKSFPSLRM-RSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 542 ++ G S C+ S SF GR KSFPSL+ +S+ RVSC AKPETV KVC IVKKQLALP D+ V G SKF+ALGADSLDTVEIVMGL SAQ+I TVQDAADLIEKL+E K Sbjct: 3 SAAAGASICIKS--ASFSPLAPGRISSLRSVSLPVSRKSFPSLKSSKSSFALRVSCQAKPETVAKVCGIVKKQLALPDDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 138
BLAST of CK933015 vs. ExPASy Swiss-Prot
Match: ACP3_CUPLA (Acyl carrier protein 3, chloroplastic OS=Cuphea lanceolata GN=ACL1.3 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.110e-28 Identity = 75/139 (53.96%), Postives = 85/139 (61.15%), Query Frame = 3 Query: 132 ASVTGTSACMTSLSCSFKQTQV-GRXXXXXXXXXXXXGKSFPSLRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 542 A+ + C+ S SCS + QV GK FPSLR P FRV C AK ETV +VC+IVKKQLALP D+ V G SKF+ALGADSLDTVEIVMGL SAQ+I TVQDAADLIEKL+ K Sbjct: 4 AAAGSSLICIKSASCSLNRAQVPSGLSSLRSVSLPISGKIFPSLRSSRGPLSFRVCCQAKQETVTRVCEIVKKQLALPEDSEVNGLSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLVGNK 142
BLAST of CK933015 vs. ExPASy Swiss-Prot
Match: ACP2_CUPLA (Acyl carrier protein 2, chloroplastic OS=Cuphea lanceolata GN=ACL1.2 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.706e-26 Identity = 74/137 (54.01%), Postives = 85/137 (62.04%), Query Frame = 3 Query: 132 ASVTGTSACMTSLSCSFKQTQVGRXXXXXXXXXXXXGKSFPSLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 542 ++ +S C+ S SCS GR KSF S R + RV+C AKPETV KVC IVKKQLALP D+ V+G SKF+ALGADSLDTVEIVMGL SAQ+I TVQDAADLIEKL+E K Sbjct: 3 SAAPASSICIKSASCS--ALAPGRISSLRSVSLPVSRKSFFS--RRGSFSLRVNCQAKPETVTKVCNIVKKQLALPDDSDVSGVSKFSALGADSLDTVEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKLMEKK 135
BLAST of CK933015 vs. ExPASy Swiss-Prot
Match: ACP1_HORVU (Acyl carrier protein 1, chloroplastic OS=Hordeum vulgare GN=ACL1.1 PE=1 SV=2) HSP 1 Score: 109.383 bits (272), Expect = 2.306e-23 Identity = 65/108 (60.19%), Postives = 75/108 (69.44%), Query Frame = 3 Query: 246 SFPSLRMR-SAPRFRVSCAA------KPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETKSA 548 SF S+ R S+ RF++ CAA K ETVDKVC IVKKQLA+P T VT ESKF+ LGADSLDTVEIVMGL SAQ I+TVQDAA+LIEKL+ K+A Sbjct: 42 SFVSISSRPSSLRFKICCAAMGEAQAKKETVDKVCMIVKKQLAVPDGTPVTAESKFSELGADSLDTVEIVMGLEEEFNITVDETSAQDIATVQDAANLIEKLVTEKTA 149
BLAST of CK933015 vs. ExPASy Swiss-Prot
Match: ACP3_HORVU (Acyl carrier protein 3, chloroplastic OS=Hordeum vulgare GN=ACL1.3 PE=1 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.952e-22 Identity = 57/98 (58.16%), Postives = 71/98 (72.45%), Query Frame = 3 Query: 258 LRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETKSA 548 LR++ P RF V C+AK +TV+KVC+IVKKQLA+P T V G +KF+ LGADSLDTVEIVMGL SAQ I+TV+DAA LI+KL+ KS+ Sbjct: 35 LRLQPVPMRFAVCCSAKQDTVEKVCEIVKKQLAVPEGTEVCGTTKFSDLGADSLDTVEIVMGLEEEFQISVEETSAQAIATVEDAATLIDKLVSAKSS 132
BLAST of CK933015 vs. ExPASy Swiss-Prot
Match: ACP2_HORVU (Acyl carrier protein 2, chloroplastic OS=Hordeum vulgare GN=ACL1.2 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 7.419e-22 Identity = 58/94 (61.70%), Postives = 67/94 (71.28%), Query Frame = 3 Query: 255 SLRMRSAP-RFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLI 533 S R++ P RF V CAAK ETV+KVC IVK QLAL DT V+G S FA LGADSLDTVEIVMGL SAQTI+TV+DAA+LI+ L+ Sbjct: 34 SFRLQPVPQRFSVCCAAKKETVEKVCDIVKSQLALSDDTEVSGSSTFADLGADSLDTVEIVMGLEEAFGISVEESSAQTIATVEDAANLIDSLV 127
BLAST of CK933015 vs. ExPASy Swiss-Prot
Match: ACP_BRACM (Acyl carrier protein SF2, chloroplastic OS=Brassica campestris GN=Acl1.1 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.819e-21 Identity = 55/96 (57.29%), Postives = 68/96 (70.83%), Query Frame = 3 Query: 255 SLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 542 +LR RF +SCAAKPETV+KV +IVKKQL+L D V E+KFA LGADSLDTVEIVMGL AQ I+TV++AA+LIE+L++ K Sbjct: 38 NLRRSIPTRFSISCAAKPETVEKVSKIVKKQLSLKDDQKVVAETKFADLGADSLDTVEIVMGLEEEFDIEMAEEKAQKIATVEEAAELIEELVQLK 133
BLAST of CK933015 vs. ExPASy Swiss-Prot
Match: ACP2_BRANA (Acyl carrier protein, chloroplastic OS=Brassica napus GN=ACL1.A2 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 8.203e-21 Identity = 55/96 (57.29%), Postives = 67/96 (69.79%), Query Frame = 3 Query: 255 SLRMRSAPRFRVSCAAKPETVDKVCQIVKKQLALPADTTVTGESKFAALGADSLDTVEIVMGLXXXXXXXXXXXSAQTISTVQDAADLIEKLIETK 542 +LR R VSCAAKPETV+KV +IVKKQL+L D V E+KFA LGADSLDTVEIVMGL AQ I+TV++AA+LIE+L++ K Sbjct: 38 NLRRSIPTRLSVSCAAKPETVEKVSKIVKKQLSLKDDQKVVAETKFADLGADSLDTVEIVMGLEEEFDIEMAEEKAQKIATVEEAAELIEELVQAK 133 The following BLAST results are available for this feature:
BLAST of CK933015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933015 ID=CK933015; Name=CK933015; organism=Citrus sinensis; type=EST; length=779bpback to top |