CK933119

Overview
NameCK933119
Unique NameCK933119
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig775 contig Csv1_Contig775:43..857. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933119 vs. ExPASy Swiss-Prot
Match: VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 8.146e-91
Identity = 171/221 (77.38%), Postives = 182/221 (82.35%), Query Frame = 3
Query:   39 MAILXXLVARGTVVLAEFSAVTGNTGAVARRIIEKLPAE-SDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSCRS 698
            MAI+  +VARGTVVLAEFSAVTGNTGAV RRI+EKL  E SD R+CFSQDRYIFHILRSDGLTFLCMANDTFGRR+PFSYLE+I MRFMKNYG+VAH APAYAMNDEFSRVLHQQMEFFSSNPS DTLNRVRGEVSEIR++MVENIEKI+ERGDRIELLVDKTATMQD +FHFRKQSKRLRRALWMKN                            PSCRS
Sbjct:    1 MAIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGKVAHNAPAYAMNDEFSRVLHQQMEFFSSNPSVDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKNAKLLVLLTCLIVFLLYIIIASFCGGITLPSCRS 221          
BLAST of CK933119 vs. ExPASy Swiss-Prot
Match: VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana GN=VAMP711 PE=2 SV=2)

HSP 1 Score: 244.588 bits (623), Expect = 4.976e-64
Identity = 109/187 (58.29%), Postives = 154/187 (82.35%), Query Frame = 3
Query:   39 MAILXXLVARGTVVLAEFSAVTGNTGAVARRIIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 599
            MAIL  LVARGTVVL+EF+A + N   +A++I+EK+P ++DS V +SQDRY+FH+ R+DGLT LCMA +T GRRIPF++LEDI  RF++ YGR  H A AYAMN+EFSRVL QQ++++S++P+AD +NR++GE++++R +M+ENI+K+L+RG+R+ELLVDKTA MQ   F FRKQ++R R  +W +N
Sbjct:    1 MAILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAVHTALAYAMNEEFSRVLSQQIDYYSNDPNADRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFRSNVWWRN 187          
BLAST of CK933119 vs. ExPASy Swiss-Prot
Match: VA713_ARATH (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana GN=VAMP713 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.891e-63
Identity = 111/188 (59.04%), Postives = 154/188 (81.91%), Query Frame = 3
Query:   39 MAILXXLVARGTVVLAEFSAVTGNTGAVARRIIEKLPA-ESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 599
            MAI+  LVARGTVVL+EFSA + N  +++++I+EKLP  +SDS + +SQDRYIFH+ R+DGLT LCMA++T GR IPF++L+DI  RF+K YGR  H A AY+MNDEFSRVL QQMEF+S++P+AD ++R++GE+S++R +M+ENI+K+L+RG+R+ELLVDKT  MQ   F FRKQ++R R  +W +N
Sbjct:    1 MAIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDGLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIHSAQAYSMNDEFSRVLSQQMEFYSNDPNADRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRYRTIMWWRN 188          
BLAST of CK933119 vs. ExPASy Swiss-Prot
Match: VA712_ARATH (Vesicle-associated membrane protein 712 OS=Arabidopsis thaliana GN=VAMP712 PE=2 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.891e-63
Identity = 109/187 (58.29%), Postives = 150/187 (80.21%), Query Frame = 3
Query:   39 MAILXXLVARGTVVLAEFSAVTGNTGAVARRIIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 599
            M+IL  LVARGTVVLAE S  + N   +A++I+EK+P   DS V +SQDRY+FH+ R+DGLT LCMA++  GRRIPFS+LEDI  RF++ YGR  H A AYAMNDEFSRVL+QQ+E++S++P+ADT++R++GE++++R +M+ENI+ IL+RG+R+ELLVDKTA MQ   F FRKQ++R    +W +N
Sbjct:    1 MSILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGLTVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQAYAMNDEFSRVLNQQIEYYSNDPNADTISRIKGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFNNTVWWRN 187          
BLAST of CK933119 vs. ExPASy Swiss-Prot
Match: VAM7B_DICDI (Vesicle-associated membrane protein 7B OS=Dictyostelium discoideum GN=vamp7B PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.324e-43
Identity = 84/188 (44.68%), Postives = 132/188 (70.21%), Query Frame = 3
Query:   39 MAILXXLVARGTVVLAEFSAVTGNTGAVARRIIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENI-EKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 599
            M I+  LVARG+ VLAEF++  GN   + RRI++ +P  +D+++ +  ++YIFH L SD LT+LCMA++ FGRRIPF++L+D++ RF   YG     A AY MN +FSR L   M+ +S+    DT++R   E+ E++ I+V +I  ++L+RG++IE+LV++T T+   +F F+KQSK+L+ A+W KN
Sbjct:    1 MPIIYSLVARGSSVLAEFTSTNGNFVTITRRILDLIPP-NDTKMSYVYEKYIFHYLVSDTLTYLCMADEEFGRRIPFTFLDDVKNRFKSMYGDKGKTAIAYGMNSDFSRTLENLMDHYSNTTRVDTMSRTMAEIDEVKNILVSDIAPQLLKRGEKIEMLVERTDTLNQQSFKFKKQSKQLKCAMWWKN 187          
BLAST of CK933119 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 2.846e-35
Identity = 76/187 (40.64%), Postives = 117/187 (62.57%), Query Frame = 3
Query:   39 MAILXXLVARGTVVLAEFSAVTGNTGAVARRIIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 599
            MAIL  +VARGT +LA+ +   GN   V  +I+ K+P+E++ ++ +S   Y+FH +  D + +LC+ +D F R   FS+L +++ RF   YG  A  A  YAMN EFS VL  Q++  S N S D +   + +V E++ IMV NI+ + +RG+R+ELL+DKT  + D +  F+  S+ L RA+ MKN
Sbjct:    1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENN-KLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKN 186          
BLAST of CK933119 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.412e-34
Identity = 74/187 (39.57%), Postives = 116/187 (62.03%), Query Frame = 3
Query:   39 MAILXXLVARGTVVLAEFSAVTGNTGAVARRIIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 599
            MAIL  +VARGT +LA+ +   GN   V  +I+ K+P+E++ ++ +S   Y+FH +  D + +LC+ +D F R   F +L +++ RF   YG  A  A  YAMN EFS VL  Q++  S N S D +   + +V E++ IMV NI+ + +RG+R+ELL+DKT  + D +  F+  S+ L RA+ +KN
Sbjct:    1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENN-KLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFGFLNEVKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENQSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCVKN 186          
BLAST of CK933119 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3)

HSP 1 Score: 146.747 bits (369), Expect = 1.412e-34
Identity = 75/187 (40.11%), Postives = 116/187 (62.03%), Query Frame = 3
Query:   39 MAILXXLVARGTVVLAEFSAVTGNTGAVARRIIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 599
            MAIL  +VARGT +LA+ +   GN   V  +I+ K+P+E++ ++ +S   Y+FH +  D + +LC+ +D F R   F++L +I+ RF   YG  A  A  YAMN EFS VL  Q++  S N   D +   + +V E++ IMV NI+ + +RG+R+ELL+DKT  + D +  F+  S+ L RA+ MKN
Sbjct:    1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENN-KLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKN 186          
BLAST of CK933119 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.412e-34
Identity = 75/187 (40.11%), Postives = 116/187 (62.03%), Query Frame = 3
Query:   39 MAILXXLVARGTVVLAEFSAVTGNTGAVARRIIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 599
            MAIL  +VARGT +LA+ +   GN   V  +I+ K+P+E++ ++ +S   Y+FH +  D + +LC+ +D F R   F++L +I+ RF   YG  A  A  YAMN EFS VL  Q++  S N   D +   + +V E++ IMV NI+ + +RG+R+ELL+DKT  + D +  F+  S+ L RA+ MKN
Sbjct:    1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENN-KLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKN 186          
BLAST of CK933119 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.109e-34
Identity = 73/187 (39.04%), Postives = 117/187 (62.57%), Query Frame = 3
Query:   39 MAILXXLVARGTVVLAEFSAVTGNTGAVARRIIEKLPAESDSRVCFSQDRYIFHILRSDGLTFLCMANDTFGRRIPFSYLEDIQMRFMKNYGRVAHYAPAYAMNDEFSRVLHQQMEFFSSNPSADTLNRVRGEVSEIRTIMVENIEKILERGDRIELLVDKTATMQDGAFHFRKQSKRLRRALWMKN 599
            MAIL  +VARGT +LA+ +   GN   V  +I+ K+P+E++ ++ +S   Y+FH +  D + +LC+ +D F R   F++L +I+ RF   YG  A  A  YAMN EFS VL  Q+++ S +   D +   + +V E++ IMV NI+ + +RG+++ELL+DKT  + D +  F+  S+ L RA+ MKN
Sbjct:    1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENN-KLTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKYHSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSRNLARAMCMKN 186          
The following BLAST results are available for this feature:
BLAST of CK933119 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
VA714_ARATH8.146e-9177.38Vesicle-associated membrane protein 714 OS=Arabido... [more]
VA711_ARATH4.976e-6458.29Vesicle-associated membrane protein 711 OS=Arabido... [more]
VA713_ARATH1.891e-6359.04Vesicle-associated membrane protein 713 OS=Arabido... [more]
VA712_ARATH1.891e-6358.29Vesicle-associated membrane protein 712 OS=Arabido... [more]
VAM7B_DICDI6.324e-4344.68Vesicle-associated membrane protein 7B OS=Dictyost... [more]
VAMP7_MOUSE2.846e-3540.64Vesicle-associated membrane protein 7 OS=Mus muscu... [more]
VAMP7_RAT1.412e-3439.57Vesicle-associated membrane protein 7 OS=Rattus no... [more]
VAMP7_HUMAN1.412e-3440.11Vesicle-associated membrane protein 7 OS=Homo sapi... [more]
VAMP7_BOVIN1.412e-3440.11Vesicle-associated membrane protein 7 OS=Bos tauru... [more]
VAMP7_CHICK4.109e-3439.04Vesicle-associated membrane protein 7 OS=Gallus ga... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004347_D01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IF_D01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933119 ID=CK933119; Name=CK933119; organism=Citrus sinensis; type=EST; length=815bp
GGGGATAACAACAACGCTTATAATTTAAATAATCAGATATGGCGATACTN
NNNNCGCTGGTGGCGCGAGGTACGGTGGTACTGGCGGAATTCAGCGCCGT
GACGGGGAACACAGGGGCGGTTGCCAGACGGATTATTGAGAAACTGCCGG
CGGAGTCCGACTCCAGGGTGTGTTTCTCGCAGGATCGCTACATATTTCAC
ATACTCAGATCCGATGGCCTCACCTTCCTCTGTATGGCCAACGACACCTT
CGGCAGAAGAATTCCATTTTCATATTTGGAGGATATTCAAATGAGGTTCA
TGAAAAACTATGGCAGAGTAGCCCACTATGCACCTGCTTATGCTATGAAT
GATGAGTTTTCAAGGGTATTGCATCAGCAGATGGAATTTTTCTCCAGCAA
TCCTAGTGCAGATACTCTCAATCGTGTGAGAGGGGAAGTTAGTGAGATAC
GCACCATCATGGTGGAGAATATTGAAAAAATATTGGAGAGAGGTGATAGG
ATTGAGCTTCTTGTTGACAAAACTGCAACAATGCAAGACGGCGCATTTCA
CTTTAGGAAACAGTCTAAGCGCCTTCGTAGAGCCCTTTGGATGAAAAATG
CCAAGCTATTGGCCCTCTTGACAGGCTTAATTGTTCTGTTGCTGTACATA
ATAATTGCTGCTGCTTGTGGAGGCATCACTTTACCTTCATGCAGATCTTG
AGTCGTGGTCGACTGGTGTTAAATTACTGCTCGGGTGTGCATTGATGTTG
TTTGTTGTCAATTATGTGAATTAATCTTGGAGAGGTTTCCTTGGTTTTGT
GGGTCAACTATTTAA
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