CK933129
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933129 vs. ExPASy Swiss-Prot
Match: R35A3_ARATH (60S ribosomal protein L35a-3 OS=Arabidopsis thaliana GN=RPL35AC PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 9.421e-56 Identity = 103/112 (91.96%), Postives = 106/112 (94.64%), Query Frame = 2 Query: 74 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSL+QIEGVNT+EEV WY GKR+AYIYKAKTKKNGSHYRCIWGKV R HGNSGVVRAKF SNLPPKSMG RVRVFMYPSNI Sbjct: 1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
BLAST of CK933129 vs. ExPASy Swiss-Prot
Match: R35A1_ARATH (60S ribosomal protein L35a-1 OS=Arabidopsis thaliana GN=RPL35AA PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 9.421e-56 Identity = 102/112 (91.07%), Postives = 106/112 (94.64%), Query Frame = 2 Query: 74 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSL+Q+EGVNT EEV+WY GKR+AYIYKAKTKKNGSHYRCIWGKV R HGNSGVVRAKF SNLPPKSMG RVRVFMYPSNI Sbjct: 1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
BLAST of CK933129 vs. ExPASy Swiss-Prot
Match: R35A2_ARATH (60S ribosomal protein L35a-2 OS=Arabidopsis thaliana GN=RPL35AB PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 1.777e-54 Identity = 101/111 (90.99%), Postives = 105/111 (94.59%), Query Frame = 2 Query: 77 VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 +KGRQGERVRLYVRGT+LGYKRSKSNQYPNTSLIQIEGVNT+EEV WY GKRLAYIYKAKTKKNGSHYRCIWGKV R HGNSGVVR+KF SNLPPKSMG RVRVFMYPSNI Sbjct: 1 MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
BLAST of CK933129 vs. ExPASy Swiss-Prot
Match: R35A4_ARATH (60S ribosomal protein L35a-4 OS=Arabidopsis thaliana GN=RPL35AD PE=3 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 2.320e-54 Identity = 100/111 (90.09%), Postives = 105/111 (94.59%), Query Frame = 2 Query: 77 VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 +KGRQGERVRLYVRGT+LGYKRSKSNQYPNTSL+QIEGVNT+EEV WY GKRLAYIYKAKTKKNGSHYRCIWGKV R HGNSGVVR+KF SNLPPKSMG RVRVFMYPSNI Sbjct: 1 MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
BLAST of CK933129 vs. ExPASy Swiss-Prot
Match: RL33B_YEAST (60S ribosomal protein L33-B OS=Saccharomyces cerevisiae GN=RPL33B PE=1 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 3.374e-29 Identity = 61/105 (58.10%), Postives = 77/105 (73.33%), Query Frame = 2 Query: 95 ERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 E RLYV+G L Y+RSK PN SLI+IEGV T +E +Y GKR+AY+Y+A + GS R +WGKV R+HGNSGVVRA F++NLP K+ G VR+F+YPSNI Sbjct: 3 ESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEVRGSKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
BLAST of CK933129 vs. ExPASy Swiss-Prot
Match: RL33A_YEAST (60S ribosomal protein L33-A OS=Saccharomyces cerevisiae GN=RPL33A PE=1 SV=3) HSP 1 Score: 127.102 bits (318), Expect = 7.517e-29 Identity = 60/105 (57.14%), Postives = 77/105 (73.33%), Query Frame = 2 Query: 95 ERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 E RLYV+G L Y+RSK PN SLI+IEGV T ++ +Y GKR+AY+Y+A + GS R +WGKV R+HGNSGVVRA F++NLP K+ G VR+F+YPSNI Sbjct: 3 ESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQDAQFYLGKRIAYVYRASKEVRGSKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
BLAST of CK933129 vs. ExPASy Swiss-Prot
Match: RL33A_SCHPO (60S ribosomal protein L33-A OS=Schizosaccharomyces pombe GN=rpl33a PE=2 SV=2) HSP 1 Score: 118.242 bits (295), Expect = 3.492e-26 Identity = 54/102 (52.94%), Postives = 73/102 (71.57%), Query Frame = 2 Query: 104 RLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 RLYV+ L ++RSK +P TSL++IEG ++KEE +Y GKR+ ++YK+ GS R IWG V+R HGNSGVVRA+F NLPPK+ G +RV +YPSN+ Sbjct: 7 RLYVKAKHLSFQRSKHVIHPGTSLVKIEGCDSKEEAQFYLGKRICFVYKSNKPVRGSKIRVIWGTVSRPHGNSGVVRARFTHNLPPKTFGASLRVMLYPSNV 108
BLAST of CK933129 vs. ExPASy Swiss-Prot
Match: RL35A_DICDI (60S ribosomal protein L35a OS=Dictyostelium discoideum GN=rpl35a PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.779e-26 Identity = 52/103 (50.49%), Postives = 80/103 (77.67%), Query Frame = 2 Query: 104 RLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRLAYIYK-AKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 ++Y +G +LGY+RS++ QYPN SLI+IEGV ++E+ +Y GK++ + K +K+ KN + ++ WGK+ ++HG+SGVV+A+F NLPPK+MG VRV +YPSNI Sbjct: 3 KIYSKGVVLGYRRSQATQYPNISLIKIEGVVSREDSTFYLGKKVCLVSKVSKSAKNPTGHKISWGKICKTHGSSGVVQARFARNLPPKAMGAPVRVMLYPSNI 105
BLAST of CK933129 vs. ExPASy Swiss-Prot
Match: RL35A_XENLA (60S ribosomal protein L35a OS=Xenopus laevis GN=rpl35a PE=3 SV=2) HSP 1 Score: 115.931 bits (289), Expect = 1.733e-25 Identity = 56/107 (52.34%), Postives = 74/107 (69.16%), Query Frame = 2 Query: 104 RLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRLAYIYKAKTKK-----NGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 RL+ + T GYKR NQ +T+L++IEGV ++E +Y GKR AY+YKAK + R IWGKV R+HGNSG+VRAKF+SNLP K++G R+RV +YPS I Sbjct: 4 RLWCKATFAGYKRGLRNQREHTALLKIEGVYARDETEFYFGKRCAYVYKAKNNTVTPGGKPNRTRVIWGKVTRAHGNSGMVRAKFRSNLPAKAIGHRIRVMLYPSRI 110
BLAST of CK933129 vs. ExPASy Swiss-Prot
Match: RL33B_SCHPO (60S ribosomal protein L33-B OS=Schizosaccharomyces pombe GN=rpl33b PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.263e-25 Identity = 53/102 (51.96%), Postives = 71/102 (69.61%), Query Frame = 2 Query: 104 RLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVAWYCGKRLAYIYKAKTKKNGSHYRCIWGKVARSHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 409 RLYV+ L ++RSK +P TS+++IEG ++KEE +Y GKR+ Y+YK+ GS R IWG +AR HGNSG VRA+F NLP K+ G +RV +YPSNI Sbjct: 7 RLYVKAKHLSFQRSKHVIHPGTSIVKIEGCDSKEEAQFYLGKRVCYVYKSSKAVRGSKIRVIWGTIARPHGNSGAVRARFVHNLPAKTFGSSLRVMLYPSNI 108 The following BLAST results are available for this feature:
BLAST of CK933129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933129 ID=CK933129; Name=CK933129; organism=Citrus sinensis; type=EST; length=638bpback to top |