CK933135

Overview
NameCK933135
Unique NameCK933135
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length806
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK933135_ssr52 microsatellite CK933135_ssr52:52..63. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig12571 contig Csv1_Contig12571:4..815. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933135 vs. ExPASy Swiss-Prot
Match: SBDS_BOVIN (Ribosome maturation protein SBDS OS=Bos taurus GN=SBDS PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 9.604e-64
Identity = 75/166 (45.18%), Postives = 110/166 (66.27%), Query Frame = 2
Query:  314 QICLEILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSETQRPYTISMIERLMHEIHFAVDPNSSSKRQALEVIRELQKHFPIKRSPMRVGLTVPEQNISSLMEKLDAWDASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVSVHAEGD 802
            +IC +IL KGE+QV+ KER TQ    FRDIATIV  K VN ET+RPYT+ +IER M +IH++V PN S+K+QALEVI++L++   I+R+ MR+   +P      L EKL      ++  ++ G QL ++C ++PG FR+ D L++     +G LE+L++    EGD
Sbjct:   82 EICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVNEGKKLKEKLKPL-IKVIESEDYGQQLEIVCLIDPGCFREVDELIKKETKGKGSLEVLSLKDVEEGD 246          

HSP 2 Score: 119.013 bits (297), Expect = 9.604e-64
Identity = 57/82 (69.51%), Postives = 69/82 (84.15%), Query Frame = 1
Query:   76 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGILAKSKDLIAAFGTDDQTNM 321
            ++  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRS VEKDLDEVLQ+H+V+ NVSKG +AK +DLI+AFGTDDQT +
Sbjct:    2 SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSKGQVAKKEDLISAFGTDDQTEI 83          
BLAST of CK933135 vs. ExPASy Swiss-Prot
Match: SBDS_RAT (Ribosome maturation protein SBDS OS=Rattus norvegicus GN=Sbds PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 2.776e-63
Identity = 77/166 (46.39%), Postives = 110/166 (66.27%), Query Frame = 2
Query:  314 QICLEILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSETQRPYTISMIERLMHEIHFAVDPNSSSKRQALEVIRELQKHFPIKRSPMRVGLTVPEQNISSLMEKLDAWDASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVSVHAEGD 802
            +IC +IL KGE+QV+ KER TQ    FRDIATIV  K VN ET+RPYT+ +IER M +IH++V PN S+K+QALEVI++L++   I+R+ MR+   +P      L EKL      + S+D S  QL ++C ++PG FR+ D L++     +G LE+L++    EGD
Sbjct:   82 EICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFLLPVNEGKKLKEKLKPLMKVVESEDYS-QQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLSLKDVEEGD 246          

HSP 2 Score: 119.013 bits (297), Expect = 2.776e-63
Identity = 57/82 (69.51%), Postives = 69/82 (84.15%), Query Frame = 1
Query:   76 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGILAKSKDLIAAFGTDDQTNM 321
            ++  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRS VEKDLDEVLQ+H+V+ NVSKG +AK +DLI+AFGTDDQT +
Sbjct:    2 SIFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSKGQVAKKEDLISAFGTDDQTEI 83          
BLAST of CK933135 vs. ExPASy Swiss-Prot
Match: SBDS_MOUSE (Ribosome maturation protein SBDS OS=Mus musculus GN=Sbds PE=2 SV=4)

HSP 1 Score: 144.05 bits (362), Expect = 2.776e-63
Identity = 77/166 (46.39%), Postives = 110/166 (66.27%), Query Frame = 2
Query:  314 QICLEILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSETQRPYTISMIERLMHEIHFAVDPNSSSKRQALEVIRELQKHFPIKRSPMRVGLTVPEQNISSLMEKLDAWDASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVSVHAEGD 802
            +IC +IL KGE+QV+ KER TQ    FRDIATIV  K VN ET+RPYT+ +IER M +IH++V PN S+K+QALEVI++L++   I+R+ MR+   +P      L EKL      + S+D S  QL ++C ++PG FR+ D L++     +G LE+L++    EGD
Sbjct:   82 EICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVNEGKKLKEKLKPLMKVVESEDYS-QQLEIVCLIDPGCFREIDELIKKETKGRGSLEVLSLKDVEEGD 246          

HSP 2 Score: 119.013 bits (297), Expect = 2.776e-63
Identity = 57/82 (69.51%), Postives = 69/82 (84.15%), Query Frame = 1
Query:   76 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGILAKSKDLIAAFGTDDQTNM 321
            ++  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRS VEKDLDEVLQ+H+V+ NVSKG +AK +DLI+AFGTDDQT +
Sbjct:    2 SIFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSKGQVAKKEDLISAFGTDDQTEI 83          
BLAST of CK933135 vs. ExPASy Swiss-Prot
Match: SBDS_PONAB (Ribosome maturation protein SBDS OS=Pongo abelii GN=SBDS PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 1.779e-62
Identity = 74/166 (44.58%), Postives = 108/166 (65.06%), Query Frame = 2
Query:  314 QICLEILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSETQRPYTISMIERLMHEIHFAVDPNSSSKRQALEVIRELQKHFPIKRSPMRVGLTVPEQNISSLMEKLDAWDASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVSVHAEGD 802
            +IC +IL KGE+QV+ KER TQ    FRDIATIV  K VN ET+RPYT+ +IER M +IH++V  N S+K+QALEVI++L++   I+R+ MR+   +P      L EKL      ++  ++ G QL ++C ++PG FR+ D L++     +G LE+L +    EGD
Sbjct:   82 EICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVNEGKKLKEKLKPL-IKVIESEDYGQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGD 246          

HSP 2 Score: 119.013 bits (297), Expect = 1.779e-62
Identity = 57/82 (69.51%), Postives = 69/82 (84.15%), Query Frame = 1
Query:   76 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGILAKSKDLIAAFGTDDQTNM 321
            ++  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRS VEKDLDEVLQ+H+V+ NVSKG +AK +DLI+AFGTDDQT +
Sbjct:    2 SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSKGQVAKKEDLISAFGTDDQTEI 83          
BLAST of CK933135 vs. ExPASy Swiss-Prot
Match: SBDS_HUMAN (Ribosome maturation protein SBDS OS=Homo sapiens GN=SBDS PE=1 SV=4)

HSP 1 Score: 141.354 bits (355), Expect = 1.779e-62
Identity = 74/166 (44.58%), Postives = 108/166 (65.06%), Query Frame = 2
Query:  314 QICLEILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSETQRPYTISMIERLMHEIHFAVDPNSSSKRQALEVIRELQKHFPIKRSPMRVGLTVPEQNISSLMEKLDAWDASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVSVHAEGD 802
            +IC +IL KGE+QV+ KER TQ    FRDIATIV  K VN ET+RPYT+ +IER M +IH++V  N S+K+QALEVI++L++   I+R+ MR+   +P      L EKL      ++  ++ G QL ++C ++PG FR+ D L++     +G LE+L +    EGD
Sbjct:   82 EICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVNEGKKLKEKLKPL-IKVIESEDYGQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGD 246          

HSP 2 Score: 119.013 bits (297), Expect = 1.779e-62
Identity = 57/82 (69.51%), Postives = 69/82 (84.15%), Query Frame = 1
Query:   76 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGILAKSKDLIAAFGTDDQTNM 321
            ++  P  Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRS VEKDLDEVLQ+H+V+ NVSKG +AK +DLI+AFGTDDQT +
Sbjct:    2 SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSKGQVAKKEDLISAFGTDDQTEI 83          
BLAST of CK933135 vs. ExPASy Swiss-Prot
Match: SBDS_CHICK (Ribosome maturation protein SBDS OS=Gallus gallus GN=SBDS PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.320e-62
Identity = 77/166 (46.39%), Postives = 111/166 (66.87%), Query Frame = 2
Query:  314 QICLEILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSETQRPYTISMIERLMHEIHFAVDPNSSSKRQALEVIRELQKHFPIKRSPMRVGLTVPEQNISSLMEKLDAWDASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVSVHAEGD 802
            +IC  IL KGELQV+ KER+TQ    FRDIATIV  K VN ET+RPYT+ +IER M +IH++V PN S+K+QALEVIR+L++   I+R+ MR+   +P +    L EKL      ++  ++   QL ++C ++PG FR+ D L+R+    +G LE+L++    EGD
Sbjct:   82 EICKVILSKGELQVSDKERQTQLEQMFRDIATIVADKCVNPETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIRQLKETMQIERAHMRLRFILPVKEGKKLKEKLKPL-IKVIENEDFHDQLEIVCLIDPGCFREIDELIRSETKGKGTLEVLSLKDVEEGD 246          

HSP 2 Score: 114.005 bits (284), Expect = 2.320e-62
Identity = 53/82 (64.63%), Postives = 66/82 (80.49%), Query Frame = 1
Query:   76 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGILAKSKDLIAAFGTDDQTNM 321
            ++  P  Q RLTNVAVVR ++ G RFEIACY+NKV+ WRS  EKD+DEVLQ+HTV+ NVSKG +AK +DL+ AFGTDDQT +
Sbjct:    2 SIFTPTNQIRLTNVAVVRARRAGKRFEIACYRNKVMGWRSGAEKDIDEVLQTHTVFVNVSKGQVAKKEDLVRAFGTDDQTEI 83          
BLAST of CK933135 vs. ExPASy Swiss-Prot
Match: SBDS_XENLA (Ribosome maturation protein SBDS OS=Xenopus laevis GN=sbds PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.926e-33
Identity = 76/166 (45.78%), Postives = 110/166 (66.27%), Query Frame = 2
Query:  314 QICLEILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSETQRPYTISMIERLMHEIHFAVDPNSSSKRQALEVIRELQKHFPIKRSPMRVGLTVPEQNISSLMEKLDAWDASIVSKDNSGSQLSLICEMEPGLFRDCDTLLR---NLQGRLEILAVSVHAEGD 802
            +IC +IL KGELQV+ KER TQ    FRDIATIV  K VN ET+RPYT+++IER M +IH++V    S+K+QAL+VI++L++   I+R+ MR+   VP ++   L EKL      I S +N   +L ++C ++PG FR+ D L+R     +G LE+L++    EGD
Sbjct:   82 EICKQILSKGELQVSEKERSTQLEQMFRDIATIVADKCVNPETKRPYTVNLIERAMKDIHYSVKATKSTKQQALDVIKQLKETMQIERAHMRLRFIVPAKDGKKLKEKLKPLIKHIES-ENFDQELEIVCLIDPGCFREIDELIRCETKGKGTLEVLSLKDVEEGD 246          

HSP 2 Score: 117.087 bits (292), Expect = 1.175e-25
Identity = 60/103 (58.25%), Postives = 74/103 (71.84%), Query Frame = 1
Query:   76 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGILAKSKDLIAAFGTDDQTNMFGDFGERGASSCWKGEGNTVL 384
            ++  P  Q RLTNVAVVR+KK G RFEIACYKNKV+SWRS  EKDLDEVLQ+H+V+ NVSKG  AK +DL+ AFGT+DQT +      +G     + E +T L
Sbjct:    2 SIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTHSVFMNVSKGQGAKKEDLLKAFGTEDQTEICKQILSKGELQVSEKERSTQL 104          
BLAST of CK933135 vs. ExPASy Swiss-Prot
Match: SBDS_DICDI (Ribosome maturation protein SBDS OS=Dictyostelium discoideum GN=sbds PE=3 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 9.926e-33
Identity = 71/169 (42.01%), Postives = 115/169 (68.05%), Query Frame = 2
Query:  311 KQICLEILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSETQRPYTISMIERLMHEIHFAVDPNSSSKRQALEVIRELQKHFPIKRSPMRVGLTVPEQNISSL-MEKLDAWDASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVSVHAEGDT 805
            ++I L ILEKGELQV+ KER+ Q    F+DIATIV +K VN+ETQRP  +S+IE+ M ++H+++ P  SSK+Q+LEVI+++    PI+R+ MR+ +T+P +   +L  +KL    + I  +D  G  LS++C ++PG +R  D L++     +G ++I+ ++V  EG+T
Sbjct:   81 QEIILLILEKGELQVSSKERDNQSEQTFKDIATIVAEKCVNTETQRPIPVSIIEKAMKDVHYSIHPTKSSKQQSLEVIKQISSVIPIQRAQMRLNITIPTKESKTLNRDKLMVLVSKIEEEDRDGGGLSIVCLVDPGSYRKIDELIKQETKGKGFIDIINLAVAKEGET 249          

HSP 2 Score: 98.5969 bits (244), Expect = 4.326e-20
Identity = 47/90 (52.22%), Postives = 66/90 (73.33%), Query Frame = 1
Query:   76 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGILAKSKDLIAAFGTDDQTNMFGDFGERG 345
            ++  PV  K LTN+ VVR KK   +FEIACY +KV S+RS++EKDL+EV+Q H +++NVSKGI+AK  +LI AFGTD++  +     E+G
Sbjct:    2 SIFTPVNNKTLTNIVVVRYKKGAAKFEIACYPSKVQSYRSKIEKDLNEVIQIHRIFTNVSKGIIAKKDELIKAFGTDNEQEIILLILEKG 91          
BLAST of CK933135 vs. ExPASy Swiss-Prot
Match: SBDS_XENTR (Ribosome maturation protein SBDS OS=Xenopus tropicalis GN=sbds PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.403e-32
Identity = 73/166 (43.98%), Postives = 108/166 (65.06%), Query Frame = 2
Query:  314 QICLEILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSETQRPYTISMIERLMHEIHFAVDPNSSSKRQALEVIRELQKHFPIKRSPMRVGLTVPEQNISSLMEKLDAWDASIVSKDNSGSQLSLICEMEPGLFRDCDTLLR---NLQGRLEILAVSVHAEGD 802
            +IC +IL KGELQV+ KER TQ    FRDIATIV  K VN ET+RPYT+++IER M +IH++V    S+K+QAL+VI++L++   I+R+ MR+   +P ++   L EKL          +N   +L ++C ++PG FR+ D L+R     +G LE+L++    EGD
Sbjct:   82 EICKQILSKGELQVSEKERSTQLEQMFRDIATIVADKCVNPETKRPYTVNLIERAMKDIHYSVKATKSTKQQALDVIKQLKETMQIERAHMRLRFILPAKDGKKLKEKLKPL-IKHTESENFDQELEIVCLIDPGCFREIDELIRCETKGKGTLEVLSLKDVEEGD 246          

HSP 2 Score: 115.546 bits (288), Expect = 3.419e-25
Identity = 58/103 (56.31%), Postives = 74/103 (71.84%), Query Frame = 1
Query:   76 TLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGILAKSKDLIAAFGTDDQTNMFGDFGERGASSCWKGEGNTVL 384
            ++  P  Q RLTNVAVVR+KK G RFEIACYKNKV+SWRS  EKDLDEVLQ+H+V+ NVSKG +AK +DL+ +FGT+D T +      +G     + E +T L
Sbjct:    2 SIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTHSVFMNVSKGQVAKKEDLLKSFGTEDPTEICKQILSKGELQVSEKERSTQL 104          
BLAST of CK933135 vs. ExPASy Swiss-Prot
Match: SBDS_CAEEL (Ribosome maturation protein SBDS OS=Caenorhabditis elegans GN=sbds-1 PE=2 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 2.368e-26
Identity = 57/82 (69.51%), Postives = 70/82 (85.37%), Query Frame = 1
Query:   67 MSKTLVQPVGQKRLTNVAVVRLKKHGMRFEIACYKNKVLSWRSQVEKDLDEVLQSHTVYSNVSKGILAKSKDLIAAFGTDDQ 312
            MSK +  P  QK LTNVAVVR+KK G RFEIACYKNKV++WR++ EKD+DEVLQ+HTV+SNVSKG L+K ++LIAAFG +DQ
Sbjct:    1 MSKNIKTPTNQKVLTNVAVVRMKKTGKRFEIACYKNKVVNWRNKSEKDIDEVLQTHTVFSNVSKGQLSKKEELIAAFGIEDQ 82          

HSP 2 Score: 113.62 bits (283), Expect = 1.299e-24
Identity = 62/195 (31.79%), Postives = 112/195 (57.44%), Query Frame = 2
Query:  227 SRTLFIRMCQKEFSRSQRI*LQHLVLMIKQICLEILEKGELQVAGKERETQFSNQFRDIATIVMQKTVNSETQRPYTISMIERLMHEIHFAVDPNSSSKRQALEVIRELQKHFPIKRSPMRVGLTVPEQNISSLMEKLDAWDASIVSKDNSGSQLSLICEMEPGLFRDCDTLLRNL---QGRLEILAVSVHAEGD 802
            + T+F  + + + S+ + +     +    +IC  IL+KG+LQV+ KER+       ++++ ++    VN ET+RP   S+I++ + E+HF++ PN SSK+QAL+ I +L++   I+R+ M++ + +P +   S+  KL    + +   D     L ++  +EPG FR  D L+RN     GRLEIL++    EG+
Sbjct:   55 THTVFSNVSKGQLSKKEELIAAFGIEDQLEICKIILDKGDLQVSEKERQAASDQSLKEVSQLIASMVVNPETKRPVPPSVIDKALQEMHFSLKPNRSSKQQALDAIPKLRETLKIERAKMKIRVAIPTKEAKSVHTKLKTLFSDVEVDDWQDGSLEMVGLIEPGSFRALDDLVRNETKGHGRLEILSLKDVVEGE 249          
The following BLAST results are available for this feature:
BLAST of CK933135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
SBDS_BOVIN9.604e-6445.18Ribosome maturation protein SBDS OS=Bos taurus GN=... [more]
SBDS_RAT2.776e-6346.39Ribosome maturation protein SBDS OS=Rattus norvegi... [more]
SBDS_MOUSE2.776e-6346.39Ribosome maturation protein SBDS OS=Mus musculus G... [more]
SBDS_PONAB1.779e-6244.58Ribosome maturation protein SBDS OS=Pongo abelii G... [more]
SBDS_HUMAN1.779e-6244.58Ribosome maturation protein SBDS OS=Homo sapiens G... [more]
SBDS_CHICK2.320e-6246.39Ribosome maturation protein SBDS OS=Gallus gallus ... [more]
SBDS_XENLA9.926e-3345.78Ribosome maturation protein SBDS OS=Xenopus laevis... [more]
SBDS_DICDI9.926e-3342.01Ribosome maturation protein SBDS OS=Dictyostelium ... [more]
SBDS_XENTR8.403e-3243.98Ribosome maturation protein SBDS OS=Xenopus tropic... [more]
SBDS_CAEEL2.368e-2669.51Ribosome maturation protein SBDS OS=Caenorhabditis... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004347_B02 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IF_B02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933135 ID=CK933135; Name=CK933135; organism=Citrus sinensis; type=EST; length=806bp
GGGGGTTCGCTTGTTCTGTTAAAACCTGGAAACTGATTGCGAAAGCTTGA
GAAGAAAGAAAGAGAGATGTCGAAGACACTGGTTCAGCCAGTAGGCCAAA
AGCGGCTGACGAACGTCGCCGTCGTTCGTCTCAAAAAGCATGGCATGCGC
TTCGAAATTGCTTGCTACAAGAATAAGGTTCTCTCTTGGCGCTCCCAAGT
AGAGAAAGATTTGGATGAAGTATTGCAGTCGCACACTGTTTATTCGAATG
TGTCAAAAGGAATTCTCGCGAAGTCAAAGGATTTGATTGCAGCATTTGGT
ACTGATGATCAAACAAATATGTTTGGAGATTTTGGAGAAAGGGGAGCTTC
AAGTTGCTGGAAAGGAGAGGGAAACACAGTTCTCTAATCAGTTTCGGGAT
ATTGCAACCATTGTTATGCAGAAGACTGTTAATTCTGAAACTCAACGTCC
TTACACTATTAGTATGATTGAGCGACTTATGCACGAAATTCATTTTGCTG
TTGACCCTAATAGCAGCTCGAAGAGGCAGGCATTGGAAGTCATTCGTGAG
CTTCAGAAGCATTTCCCAATAAAAAGGTCTCCGATGAGGGTGGGACTTAC
TGTTCCAGAGCAAAATATTTCTTCTTTAATGGAGAAACTAGATGCATGGG
ATGCTAGCATTGTCTCCAAAGATAATTCTGGAAGTCAGCTGTCTCTCATT
TGTGAAATGGAGCCAGGTCTTTTTCGGGATTGTGATACCCTACTGAGGAA
TCTGCAGGGCAGGTTGGAAATTCTTGCAGTGTCAGTGCATGCAGAGGGGG
ATACAA
back to top