CK933140

Overview
NameCK933140
Unique NameCK933140
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length846
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8343 contig Csv1_Contig8343:10..855. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933140 vs. ExPASy Swiss-Prot
Match: DLDH1_ARATH (Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=LPD1 PE=1 SV=2)

HSP 1 Score: 417.542 bits (1072), Expect = 4.545e-116
Identity = 216/268 (80.60%), Postives = 235/268 (87.69%), Query Frame = 1
Query:   46 MAMASLARRKAYVXXXXXXXXXXGNVFKYSFSLTRGFASA-SDENDXXXXXXXXXXXXAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK 846
            MAMASLARRKAY            +  ++SFSL+RGFAS+ SDEND            AAIKA+QLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEA HSFA+HG+K SSVEVDLPAM+AQKD AV NLTRGIEGLFKKNKVTYVKGYGKFISP+EVSV+TI+GGNT+VKGK+II+ATGSDVKSLPGITIDEK+IVSSTGAL+L+EVPKKL+VIGAGYIGLEMGSVW RLGSEVTVVEFA DIVPSMDGEIRKQFQRSLEK
Sbjct:    1 MAMASLARRKAYFLTRNLSNSPT-DALRFSFSLSRGFASSGSDENDVVIIGGGPGGYVAAIKASQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGIKVSSVEVDLPAMLAQKDNAVKNLTRGIEGLFKKNKVTYVKGYGKFISPNEVSVETIDGGNTIVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGALSLSEVPKKLIVIGAGYIGLEMGSVWGRLGSEVTVVEFAGDIVPSMDGEIRKQFQRSLEK 267          
BLAST of CK933140 vs. ExPASy Swiss-Prot
Match: DLDH2_ARATH (Dihydrolipoyl dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=LPD2 PE=1 SV=1)

HSP 1 Score: 413.69 bits (1062), Expect = 6.563e-115
Identity = 215/268 (80.22%), Postives = 232/268 (86.57%), Query Frame = 1
Query:   46 MAMASLARRKAYVXXXXXXXXXXGNVFKYSFSLTRGFASA-SDENDXXXXXXXXXXXXAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK 846
            MAMASLARRKAY            + F++SFSLTRGFAS+ SD+ND            AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEA H FA+HGVK SSVEVDLPAM+AQKD AV NLTRG+EGLFKKNKV YVKGYGKF+SPSEVSVDTI+G N VVKGK+II+ATGSDVKSLPGITIDEK+IVSSTGAL+L E+PKKL+VIGAGYIGLEMGSVW RLGSEVTVVEFAADIVP+MDGEIRKQFQRSLEK
Sbjct:    1 MAMASLARRKAYFLTRNISNSPT-DAFRFSFSLTRGFASSGSDDNDVVIIGGGPGGYVAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHVFANHGVKVSSVEVDLPAMLAQKDTAVKNLTRGVEGLFKKNKVNYVKGYGKFLSPSEVSVDTIDGENVVVKGKHIIVATGSDVKSLPGITIDEKKIVSSTGALSLTEIPKKLIVIGAGYIGLEMGSVWGRLGSEVTVVEFAADIVPAMDGEIRKQFQRSLEK 267          
BLAST of CK933140 vs. ExPASy Swiss-Prot
Match: DLDH_PEA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Pisum sativum GN=LPD PE=1 SV=2)

HSP 1 Score: 408.297 bits (1048), Expect = 2.757e-113
Identity = 212/268 (79.10%), Postives = 229/268 (85.45%), Query Frame = 1
Query:   46 MAMASLARRKAYVXXXXXXXXXXGNVFKYSFSL-TRGFASASDENDXXXXXXXXXXXXAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK 846
            MAMA+LARRK Y               +YSFSL +R FAS SDEND            AAIKAAQLG KTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEA HSFA+HGVK S+VE+DL AMM QKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF+SPSE+SVDTIEG NTVVKGK+IIIATGSDVKSLPG+TIDEK+IVSSTGALAL+E+PKKLVVIGAGYIGLEMGSVW R+GSEVTVVEFA++IVP+MD EIRKQFQRSLEK
Sbjct:    1 MAMANLARRKGY-------SLLSSETLRYSFSLRSRAFASGSDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVKSLPGVTIDEKKIVSSTGALALSEIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPTMDAEIRKQFQRSLEK 261          
BLAST of CK933140 vs. ExPASy Swiss-Prot
Match: DLDH_DICDI (Dihydrolipoyl dehydrogenase, mitochondrial OS=Dictyostelium discoideum GN=lpd PE=3 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 3.410e-71
Identity = 135/210 (64.29%), Postives = 160/210 (76.19%), Query Frame = 1
Query:  217 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK 846
            A IKA QLG+K T +EKRG LGGTCLNVGCIPSKALL++SH+Y EA    + +GVK S VE+DL AMM  KDK+VS LT GIEGLFKKNKV Y KG+GK   P+ V V   +G    ++ KNI+IATGS+V SLP + IDE+ I+SSTGALAL  VPKKL+VIG G IGLE+GSVW+RLGSE TVVEF   I    DGE+ K+FQ+SLEK
Sbjct:   37 AGIKAGQLGMKVTVVEKRGKLGGTCLNVGCIPSKALLNASHLYEEATTKMSKYGVKCSGVELDLGAMMQYKDKSVSGLTSGIEGLFKKNKVKYDKGFGKITGPNTVEVTLNDGSVKTIETKNIVIATGSEVTSLPNVNIDEESIISSTGALALKSVPKKLIVIGGGVIGLELGSVWSRLGSETTVVEFTNRIAAGADGEVAKKFQKSLEK 246          
BLAST of CK933140 vs. ExPASy Swiss-Prot
Match: DLDH_SCHPO (Dihydrolipoyl dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=dld1 PE=2 SV=2)

HSP 1 Score: 258.07 bits (658), Expect = 4.609e-68
Identity = 134/231 (58.01%), Postives = 160/231 (69.26%), Query Frame = 1
Query:  157 ASASDENDXXXXXXXXXXXXAAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEG-GNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK 846
            AS + E D            AAI+ AQLGLKT C+EKRG LGGTCLNVGCIPSKALL++SH+YH   H     G+  S V V+L  MM  KD +V +LT GIE LFKKNKV Y KG G FI P  +SV  I+G  +  +K KN IIATGS+VK  PG+TIDEK+IVSSTGAL+L+EVPKK+ V+G G IGLEMGSVW+RLG+EVTVVEF   +   MD +I K   R + K
Sbjct:   40 ASGNGEYDLCVIGGGPGGYVAAIRGAQLGLKTICVEKRGTLGGTCLNVGCIPSKALLNNSHIYHTVKHDTKRRGIDVSGVSVNLSQMMKAKDDSVKSLTSGIEYLFKKNKVEYAKGTGSFIDPQTLSVKGIDGAADQTIKAKNFIIATGSEVKPFPGVTIDEKKIVSSTGALSLSEVPKKMTVLGGGIIGLEMGSVWSRLGAEVTVVEFLPAVGGPMDADISKALSRIISK 270          
BLAST of CK933140 vs. ExPASy Swiss-Prot
Match: DLDH_TRYBB (Dihydrolipoyl dehydrogenase OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.037e-64
Identity = 122/211 (57.82%), Postives = 161/211 (76.30%), Query Frame = 1
Query:  217 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSS-VEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEK 846
            AAIKAAQLGLKT C+EKRGALGGTCLNVGCIPSKALLH++HMYH+A  +F  +G+   + V +D+  M  QK+K+V+ LT G+E L KKNKVTY KG   F++P+ ++V  I+G +  ++ KN IIATGS+  +LP +  DEK ++SSTGALAL +VPKK+VVIG G IGLE+GSVWARLGS+VTVVEFA    P++D ++      +L++
Sbjct:   26 AAIKAAQLGLKTACVEKRGALGGTCLNVGCIPSKALLHATHMYHDAHANFERYGLMGGAGVTMDVAKMQQQKEKSVNGLTSGVEYLLKKNKVTYYKGEAGFVTPNTLNVKGIDGKDEAIEAKNTIIATGSEPTALPFLPFDEKVVLSSTGALALQQVPKKMVVIGGGVIGLELGSVWARLGSDVTVVEFAPRCAPTLDSDVTDALVGALKR 236          
BLAST of CK933140 vs. ExPASy Swiss-Prot
Match: DLDH_MACFA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Macaca fascicularis GN=DLD PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.299e-62
Identity = 127/212 (59.91%), Postives = 154/212 (72.64%), Query Frame = 1
Query:  217 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAM-HSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVP-SMDGEIRKQFQRSLEK 846
            AAIKAAQLG KT C+EK   LGGTCLNVGCIPSKALL++SH YH A    FAS G++ S V ++L  MM QK  AV  LT GI  LFK+NKV +V GYGK    ++V+   ++GG  VV  KNI+IATGS+V   PGITIDE  IVSSTGAL+L +VP+K+VVIGAG IG+E+GSVW RLG++VT VEF   +    +D EI K FQR L+K
Sbjct:   56 AAIKAAQLGFKTVCVEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVIHVNGYGKITGKNQVTATKVDGGTQVVDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGIGIDMEISKNFQRILQK 267          
BLAST of CK933140 vs. ExPASy Swiss-Prot
Match: DLDH_HUMAN (Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo sapiens GN=DLD PE=1 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 2.893e-62
Identity = 127/212 (59.91%), Postives = 153/212 (72.17%), Query Frame = 1
Query:  217 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAM-HSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-VPSMDGEIRKQFQRSLEK 846
            AAIKAAQLG KT CIEK   LGGTCLNVGCIPSKALL++SH YH A    FAS G++ S V ++L  MM QK  AV  LT GI  LFK+NKV +V GYGK    ++V+    +GG  V+  KNI+IATGS+V   PGITIDE  IVSSTGAL+L +VP+K+VVIGAG IG+E+GSVW RLG++VT VEF   +    +D EI K FQR L+K
Sbjct:   56 AAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQK 267          
BLAST of CK933140 vs. ExPASy Swiss-Prot
Match: DLDH_PONAB (Dihydrolipoyl dehydrogenase, mitochondrial OS=Pongo abelii GN=DLD PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.875e-61
Identity = 125/212 (58.96%), Postives = 152/212 (71.70%), Query Frame = 1
Query:  217 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAM-HSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-VPSMDGEIRKQFQRSLEK 846
            AAIKAAQLG KT C+EK   LGGTCLNVGCIPSKALL++SH YH A    FAS G++ S V ++L  MM QK  AV  LT GI  LFK+NKV +V GYGK    ++V+    +GG  V+  KNI+IATGS+V   PGI IDE  IVSSTGAL+L +VP+K+VVIGAG IG+E+GSVW RLG++VT VEF   +    +D EI K FQR L+K
Sbjct:   56 AAIKAAQLGFKTVCVEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTATKADGGTQVIDTKNILIATGSEVTPFPGIMIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQK 267          
BLAST of CK933140 vs. ExPASy Swiss-Prot
Match: DLDH_CANFA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Canis familiaris GN=DLD PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.875e-61
Identity = 125/212 (58.96%), Postives = 152/212 (71.70%), Query Frame = 1
Query:  217 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAM-HSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADI-VPSMDGEIRKQFQRSLEK 846
            AAIKAAQLG KT C+EK   LGGTCLNVGCIPSKALL++SH YH A    FAS G++ S V ++L  MM QK  AV  LT GI  LFK+NKV +V GYGK    ++V+    +G   V+  KNI+IATGS+V   PGITIDE  IVSSTGAL+L +VP+K+VVIGAG IG+E+GSVW RLG++VT VEF   +    +D EI K FQR L+K
Sbjct:   56 AAIKAAQLGFKTVCVEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGKDFASRGIEMSEVRLNLEKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGKNQVTAKKADGSTQVIDTKNILIATGSEVTPFPGITIDEDTIVSSTGALSLKKVPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGVGIDMEISKNFQRILQK 267          
The following BLAST results are available for this feature:
BLAST of CK933140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 223
Match NameE-valueIdentityDescription
DLDH1_ARATH4.545e-11680.60Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Ar... [more]
DLDH2_ARATH6.563e-11580.22Dihydrolipoyl dehydrogenase 2, mitochondrial OS=Ar... [more]
DLDH_PEA2.757e-11379.10Dihydrolipoyl dehydrogenase, mitochondrial OS=Pisu... [more]
DLDH_DICDI3.410e-7164.29Dihydrolipoyl dehydrogenase, mitochondrial OS=Dict... [more]
DLDH_SCHPO4.609e-6858.01Dihydrolipoyl dehydrogenase, mitochondrial OS=Schi... [more]
DLDH_TRYBB4.037e-6457.82Dihydrolipoyl dehydrogenase OS=Trypanosoma brucei ... [more]
DLDH_MACFA1.299e-6259.91Dihydrolipoyl dehydrogenase, mitochondrial OS=Maca... [more]
DLDH_HUMAN2.893e-6259.91Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo... [more]
DLDH_PONAB1.875e-6158.96Dihydrolipoyl dehydrogenase, mitochondrial OS=Pong... [more]
DLDH_CANFA1.875e-6158.96Dihydrolipoyl dehydrogenase, mitochondrial OS=Cani... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004347_B10 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0004_IF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933140 ID=CK933140; Name=CK933140; organism=Citrus sinensis; type=EST; length=846bp
GGGGACCAATTCAATCCATTGATTGGAGAAAAAGTTGATTGAAAAATGGC
GATGGCAAGTCTTGCAAGAAGAAAGGCGTACGTGCTGTCAAGGAATCTCT
CGAACTCGTTGAATGGTAATGTTTTCAAGTACAGTTTCTCGCTTACAAGG
GGCTTCGCTTCGGCATCTGATGAGAACGACGTCGTCGTCATCGGAGGTGG
ACCTGGTGGTTACGTGGCCGCCATCAAGGCCGCCCAGCTTGGTCTCAAGA
CTACGTGCATCGAGAAGCGTGGGGCCCTCGGCGGCACGTGCCTTAACGTC
GGATGCATCCCCTCTAAGGCACTTCTTCATTCTTCCCACATGTACCATGA
AGCCATGCATTCTTTTGCCAGCCATGGTGTAAAGTTTTCTTCTGTTGAAG
TTGATTTGCCTGCTATGATGGCCCAAAAAGATAAAGCTGTGTCTAATCTT
ACAAGAGGTATTGAAGGTCTATTCAAGAAGAACAAGGTAACCTATGTGAA
AGGATATGGCAAGTTTATCTCCCCATCTGAGGTCTCTGTGGACACCATTG
AAGGTGGAAACACTGTCGTGAAAGGCAAGAATATCATAATTGCTACTGGT
TCTGACGTTAAGTCTCTACCTGGGATCACCATTGATGAAAAGAGAATTGT
GTCATCCACTGGAGCTTTAGCATTGAATGAAGTTCCTAAGAAACTCGTGG
TCATTGGGGCAGGCTACATTGGGCTGGAGATGGGCTCAGTTTGGGCCAGG
CTTGGTTCAGAGGTCACTGTTGTTGAATTTGCAGCTGATATCGTCCCAAG
CATGGATGGGGAAATTCGCAAGCAATTTCAGCGTTCACTTGAGAAG
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