CK933203 | Citrus Genome Database

Overview


Name	CK933203
Unique Name	CK933203
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	636

Libraries


Library Name	Type
Developing fruit juice sac at 38 DAFB	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig1540	contig	Csv1_Contig1540:1..636.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CK933203 vs. ExPASy Swiss-Prot
Match: 14337_SOLLC (14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 PE=2 SV=2)

HSP 1 Score: 352.443 bits (903), Expect = 1.100e-96
Identity = 178/212 (83.96%), Postives = 192/212 (90.57%), Query Frame = 1

Query:    1 LAEXXERYEKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYRDSTLIM*LL 636
            LAE  ERY++MVEAMK +AK+DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEE+KG+EQNVKRIK YRQRVEDEL KIC+DILSVIDEHL+PSST+GESTVFYYKMKGDYYRYLAEFK  DDRKEA++ SLK          S+L PTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSL+EESY+DSTLIM LL
Sbjct:   14 LAEQAERYDEMVEAMKAIAKMDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEESKGHEQNVKRIKTYRQRVEDELTKICSDILSVIDEHLVPSSTTGESTVFYYKMKGDYYRYLAEFKAGDDRKEASEQSLKAYEAATATASSDLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLL 225

[Close]

BLAST of CK933203 vs. ExPASy Swiss-Prot
Match: 1433D_SOYBN (14-3-3-like protein D OS=Glycine max GN=GF14D PE=2 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 1.259e-92
Identity = 169/212 (79.72%), Postives = 187/212 (88.21%), Query Frame = 1

Query:    1 LAEXXERYEKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYRDSTLIM*LL 636
            LAE  ERYE+MVE+MK VA LDVELTVEERNL+SVGYKNVIGARRASWRILSSIEQKEE KGNE N KRIKEYRQ+VE EL+ ICND++ VIDEHLIPS+ +GESTVFYYKMKGDYYRYLAEFK  +++KEAAD S+K          ++LPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI+ELD+LNEESY+DSTLIM LL
Sbjct:   16 LAEQAERYEEMVESMKNVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEETKGNELNAKRIKEYRQKVELELSNICNDVMRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKSGNEKKEAADQSMKAYESATAAAEADLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLL 227

[Close]

BLAST of CK933203 vs. ExPASy Swiss-Prot
Match: 1433_TOBAC (14-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.065e-91
Identity = 174/212 (82.08%), Postives = 187/212 (88.21%), Query Frame = 1

Query:    1 LAEXXERYEKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYRDSTLIM*LL 636
            LAE  ERY++MVEAMK VAK+DVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEE+KG++QNVKRIK Y+QRVEDEL K     LSVIDEH++PSSTSGESTVFYYKMKGDYYRYLAEFK  DDRKEAAD SLK          ++L PTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSL+EESY+DSTLIM LL
Sbjct:   14 LAEQAERYDEMVEAMKTVAKMDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEESKGHDQNVKRIKTYQQRVEDELTKYALT-LSVIDEHVVPSSTSGESTVFYYKMKGDYYRYLAEFKSGDDRKEAADQSLKAYEAATATASADLAPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLSEESYKDSTLIMQLL 224

[Close]

BLAST of CK933203 vs. ExPASy Swiss-Prot
Match: 14310_ARATH (14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana GN=GRF10 PE=2 SV=1)

HSP 1 Score: 332.798 bits (852), Expect = 9.020e-91
Identity = 168/212 (79.25%), Postives = 187/212 (88.21%), Query Frame = 1

Query:    1 LAEXXERYEKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYRDSTLIM*LL 636
            L+E  ERY++MVEAMKKVA+LDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEE+KGN++NVKR+K YR+RVEDELAK+CNDILSVID+HLIPSS + ESTVF+YKMKGDYYRYLAEF    +RKEAAD SL+          + L PTHP+RLGLALNFSVFYYEILNSPE AC LAKQAFD+AIAELDSLNEESY+DSTLIM LL
Sbjct:   14 LSEQTERYDEMVEAMKKVAQLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEESKGNDENVKRLKNYRKRVEDELAKVCNDILSVIDKHLIPSSNAVESTVFFYKMKGDYYRYLAEFSSGAERKEAADQSLEAYKAAVAAAENGLAPTHPVRLGLALNFSVFYYEILNSPESACQLAKQAFDDAIAELDSLNEESYKDSTLIMQLL 225

[Close]

BLAST of CK933203 vs. ExPASy Swiss-Prot
Match: 14311_ARATH (14-3-3-like protein GF14 omicron OS=Arabidopsis thaliana GN=GRF11 PE=2 SV=1)

HSP 1 Score: 332.028 bits (850), Expect = 1.539e-90
Identity = 168/212 (79.25%), Postives = 187/212 (88.21%), Query Frame = 1

Query:    1 LAEXXERYEKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYRDSTLIM*LL 636
            L E  ERY++MVEAMKKVA LDVELT+EERNL+SVGYKNVIGARRASWRILSSIEQKEE+KGNEQN KRIK+YR +VE+EL+KIC DIL+VID+HL+P +TSGESTVFYYKMKGDY+RYLAEFK   DR+EAAD SLK          +EL  THPIRLGLALNFSVFYYEILNSPERACHLAK+AFDEAIAELDSLNE+SY+DSTLIM LL
Sbjct:   14 LNEQAERYDEMVEAMKKVAALDVELTIEERNLLSVGYKNVIGARRASWRILSSIEQKEESKGNEQNAKRIKDYRTKVEEELSKICYDILAVIDKHLVPFATSGESTVFYYKMKGDYFRYLAEFKSGADREEAADLSLKAYEAATSSASTELSTTHPIRLGLALNFSVFYYEILNSPERACHLAKRAFDEAIAELDSLNEDSYKDSTLIMQLL 225

[Close]

BLAST of CK933203 vs. ExPASy Swiss-Prot
Match: 1433B_VICFA (14-3-3-like protein B OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 331.257 bits (848), Expect = 2.624e-90
Identity = 164/212 (77.36%), Postives = 185/212 (87.26%), Query Frame = 1

Query:    1 LAEXXERYEKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYRDSTLIM*LL 636
            LAE  ERYE+MV++MK VA LDVELT+EERNL+SVGYKNVIGARRASWRILSSIEQKEE+KGN+ N KRIKEYR +VE EL+ IC D++ VIDEHLIPS+ +GESTVFYYKMKGDYYRYLAEFK  +++KEA D S+K          +ELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI+ELD+LNEESY+DSTLIM LL
Sbjct:   16 LAEQAERYEEMVDSMKNVANLDVELTIEERNLLSVGYKNVIGARRASWRILSSIEQKEESKGNDVNAKRIKEYRHKVETELSNICIDVMRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKTGNEKKEAGDQSMKAYESATTAAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLL 227

[Close]

BLAST of CK933203 vs. ExPASy Swiss-Prot
Match: 1433C_SOYBN (14-3-3-like protein C OS=Glycine max GN=GF14C PE=2 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 4.476e-90
Identity = 166/212 (78.30%), Postives = 188/212 (88.68%), Query Frame = 1

Query:    1 LAEXXERYEKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYRDSTLIM*LL 636
            LAE  ERYE+MVEAMK VA L+VELTVEERNL+SVGYKNV+GARRASWRILSSIEQKEEAKGN+ +VKRIKEYR +VE EL+ IC+DI++VIDE+LIPSS+SGE +VF+YKMKGDYYRYLAEFK  D+RKEAADHS+K          +EL  THPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAI+ELD+L+EESY+DSTLIM LL
Sbjct:   16 LAEQAERYEEMVEAMKNVANLNVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEEAKGNDVSVKRIKEYRLKVESELSNICSDIMTVIDEYLIPSSSSGEPSVFFYKMKGDYYRYLAEFKSGDERKEAADHSMKAYQLASTTAEAELASTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLSEESYKDSTLIMQLL 227

[Close]

BLAST of CK933203 vs. ExPASy Swiss-Prot
Match: 14339_SOLLC (14-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 PE=2 SV=2)

HSP 1 Score: 330.487 bits (846), Expect = 4.476e-90
Identity = 164/212 (77.36%), Postives = 186/212 (87.74%), Query Frame = 1

Query:    1 LAEXXERYEKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYRDSTLIM*LL 636
            LAE  ERY++MVEAMK VA +DVELTVEERNL+SVGYKNV+G+RRASWRILSSIEQKEE++GNEQNVKRIKEY Q+VE EL  ICNDI+ VID+HLIPS ++GESTVFY+KMKGDYYRYLAEFK  +D+KE A+ SLK          +EL PTHPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAI+ELDSLNE+SY+DSTLIM LL
Sbjct:   16 LAEQAERYDEMVEAMKNVANMDVELTVEERNLLSVGYKNVVGSRRASWRILSSIEQKEESRGNEQNVKRIKEYLQKVESELTNICNDIMVVIDQHLIPSCSAGESTVFYHKMKGDYYRYLAEFKAGNDKKEVAELSLKAYQAATTAAEAELAPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDSLNEDSYKDSTLIMQLL 227

[Close]

BLAST of CK933203 vs. ExPASy Swiss-Prot
Match: 14312_ARATH (14-3-3-like protein GF14 iota OS=Arabidopsis thaliana GN=GRF12 PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 7.636e-90
Identity = 164/212 (77.36%), Postives = 187/212 (88.21%), Query Frame = 1

Query:    1 LAEXXERYEKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYRDSTLIM*LL 636
            L+E  ERY++MVE MKKVA+++ ELTVEERNL+SVGYKNVIGARRASWRI+SSIEQKEE+KGNE NVK+IK YRQ+VEDELA IC DIL++ID+HLIP +TSGE+TVFYYKMKGDYYRYLAEFK   +RKEAA+ SLK          +ELP THPIRLGLALNFSVFYYEI+NSPERACHLAKQAFDEAIAELD+L+EESY+DSTLIM LL
Sbjct:   19 LSEQAERYDEMVETMKKVARVNSELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNESNVKQIKGYRQKVEDELANICQDILTIIDQHLIPHATSGEATVFYYKMKGDYYRYLAEFKTEQERKEAAEQSLKGYEAATQAASTELPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLL 230

[Close]

BLAST of CK933203 vs. ExPASy Swiss-Prot
Match: 14338_SOLLC (14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 PE=2 SV=2)

HSP 1 Score: 324.324 bits (830), Expect = 3.208e-88
Identity = 161/212 (75.94%), Postives = 184/212 (86.79%), Query Frame = 1

Query:    1 LAEXXERYEKMVEAMKKVAKLDVELTVEERNLVSVGYKNVIGARRASWRILSSIEQKEEAKGNEQNVKRIKEYRQRVEDELAKICNDILSVIDEHLIPSSTSGESTVFYYKMKGDYYRYLAEFKGADDRKEAADHSLKXXXXXXXXXXSELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAIAELDSLNEESYRDSTLIM*LL 636
            LAE  ERY++MV+AMK VA LDVELTVEERNL+SVGYKNV+G+RRASWRILSSIEQKE+A+GNEQNVKRI+ YRQ+VE EL  ICN+I++VIDEHLIPS T+GESTVFYYKMKGDYYRYLAEFK  DD+KE +D SLK          +ELP THPIRLGLALNFSVFYYEI+NSPERAC LAKQ FDEAI+ELDSLNE++Y+D TLI+ LL
Sbjct:   16 LAEQAERYDEMVDAMKNVANLDVELTVEERNLLSVGYKNVVGSRRASWRILSSIEQKEDARGNEQNVKRIQGYRQKVESELTDICNNIMTVIDEHLIPSCTAGESTVFYYKMKGDYYRYLAEFKTGDDKKEVSDLSLKAYQTATTTAEAELPITHPIRLGLALNFSVFYYEIMNSPERACQLAKQVFDEAISELDSLNEDNYKDGTLILQLL 227

The following BLAST results are available for this feature:

BLAST of CK933203 vs. ExPASy Swiss-Prot

BLAST of CK933203 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143


Match Name	E-value	Identity	Description
14337_SOLLC	1.100e-96	83.96	14-3-3 protein 7 OS=Solanum lycopersicum GN=TFT7 P...	[more]
1433D_SOYBN	1.259e-92	79.72	14-3-3-like protein D OS=Glycine max GN=GF14D PE=2...	[more]
1433_TOBAC	1.065e-91	82.08	14-3-3-like protein OS=Nicotiana tabacum PE=2 SV=1	[more]
14310_ARATH	9.020e-91	79.25	14-3-3-like protein GF14 epsilon OS=Arabidopsis th...	[more]
14311_ARATH	1.539e-90	79.25	14-3-3-like protein GF14 omicron OS=Arabidopsis th...	[more]
1433B_VICFA	2.624e-90	77.36	14-3-3-like protein B OS=Vicia faba PE=2 SV=1	[more]
1433C_SOYBN	4.476e-90	78.30	14-3-3-like protein C OS=Glycine max GN=GF14C PE=2...	[more]
14339_SOLLC	4.476e-90	77.36	14-3-3 protein 9 OS=Solanum lycopersicum GN=TFT9 P...	[more]
14312_ARATH	7.636e-90	77.36	14-3-3-like protein GF14 iota OS=Arabidopsis thali...	[more]
14338_SOLLC	3.208e-88	75.94	14-3-3 protein 8 OS=Solanum lycopersicum GN=TFT8 P...	[more]

Pages

Properties


Property Name	Value
Genbank description	CGF1004289_C04 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_C04 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CK933203 ID=CK933203; Name=CK933203; organism=Citrus sinensis; type=EST; length=636bp
CTTGCTGAGNNNNNCGAGAGATACGAAAAGATGGTTGAAGCCATGAAGAA
AGTTGCCAAGTTGGATGTGGAACTGACTGTGGAGGAGAGGAATCTGGTGT
CTGTTGGGTACAAGAATGTGATTGGGGCAAGAAGAGCATCATGGAGGATT
TTGTCTTCCATTGAACAGAAGGAGGAGGCCAAGGGTAATGAACAAAATGT
GAAGAGGATTAAGGAATATAGGCAGAGGGTTGAAGATGAGCTTGCAAAGA
TCTGTAATGATATATTGTCAGTCATTGATGAACACCTAATCCCATCCTCC
ACATCTGGAGAATCAACCGTGTTTTACTATAAGATGAAAGGAGATTATTA
CCGTTACCTAGCTGAGTTCAAAGGTGCTGATGATCGTAAGGAAGCTGCAG
ATCATTCACTTAAGGCTTACGAGGCTGCTACAGCTGCAGCAGCCTCAGAG
TTACCCCCAACTCATCCAATCAGACTTGGCCTGGCTCTTAACTTTTCTGT
TTTCTACTATGAGATTTTGAACTCACCTGAGAGGGCTTGCCACCTGGCTA
AACAAGCATTTGATGAGGCTATTGCTGAACTTGATAGCCTTAATGAGGAG
TCCTACAGGGACAGCACCCTTATTATGTAGCTTCTT