CK933204
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933204 vs. ExPASy Swiss-Prot
Match: EFTM_ARATH (Elongation factor Tu, mitochondrial OS=Arabidopsis thaliana GN=TUFA PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.430e-47 Identity = 101/130 (77.69%), Postives = 110/130 (84.62%), Query Frame = 2 Query: 98 MASVVLRNPNSKRIVPFSSQIYSCCRGSL----SISDAFSANETSATRCGPSVNPWWRSMATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYETA 475 MASVVLRNP+SKR+VPFSSQIYS C S+ SIS + ++ S++ G S +WRSMATFTR K HVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYETA Sbjct: 1 MASVVLRNPSSKRLVPFSSQIYSRCGASVTSSYSISHSIGGDDLSSSTFGTS--SFWRSMATFTRNKPHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYETA 128
BLAST of CK933204 vs. ExPASy Swiss-Prot
Match: EFTU_CLOK5 (Elongation factor Tu OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=tuf1 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.178e-25 Identity = 57/71 (80.28%), Postives = 61/71 (85.92%), Query Frame = 2 Query: 260 SMATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYET 472 S F RTK HVN+GTIGHVDHGKTTLTAAIT VLA+EGKA A +DEIDKAPEEK+RGITI TAHVEYET Sbjct: 2 SKEKFERTKPHVNIGTIGHVDHGKTTLTAAITMVLAKEGKASATKYDEIDKAPEEKERGITINTAHVEYET 72
BLAST of CK933204 vs. ExPASy Swiss-Prot
Match: EFTU_CLOAB (Elongation factor Tu OS=Clostridium acetobutylicum GN=tuf PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 1.539e-25 Identity = 55/67 (82.09%), Postives = 61/67 (91.04%), Query Frame = 2 Query: 272 FTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYET 472 F RTK HVN+GTIGHVDHGKTTLTAAIT +LA+EGKAKA ++EIDKAPEEK+RGITI TAHVEYET Sbjct: 6 FERTKPHVNIGTIGHVDHGKTTLTAAITTILAKEGKAKAFNYEEIDKAPEEKERGITINTAHVEYET 72
BLAST of CK933204 vs. ExPASy Swiss-Prot
Match: EFTU_CALS8 (Elongation factor Tu OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=tuf PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.428e-25 Identity = 55/69 (79.71%), Postives = 63/69 (91.30%), Query Frame = 2 Query: 266 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYET 472 A F RTK HVN+GTIGHVDHGKTTLTAAITKVLA +GKA+ +A+D+IDKAPEE++RGITI TAHVEYET Sbjct: 4 AKFERTKPHVNIGTIGHVDHGKTTLTAAITKVLALKGKAQFMAYDQIDKAPEERERGITINTAHVEYET 72
BLAST of CK933204 vs. ExPASy Swiss-Prot
Match: EFTU_ANATD (Elongation factor Tu OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=tuf PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.428e-25 Identity = 55/69 (79.71%), Postives = 63/69 (91.30%), Query Frame = 2 Query: 266 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYET 472 A F RTK HVN+GTIGHVDHGKTTLTAAITKVLA +GKA+ +A+D+IDKAPEE++RGITI TAHVEYET Sbjct: 4 AKFERTKPHVNIGTIGHVDHGKTTLTAAITKVLALKGKAQFMAYDQIDKAPEERERGITINTAHVEYET 72
BLAST of CK933204 vs. ExPASy Swiss-Prot
Match: EFTU_SYMTH (Elongation factor Tu OS=Symbiobacterium thermophilum GN=tuf PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 4.478e-25 Identity = 54/67 (80.60%), Postives = 62/67 (92.54%), Query Frame = 2 Query: 272 FTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYET 472 F RTK HVN+GTIGHVDHGKTTLTAAITKVLAE+GKA+ +A+D IDKAPEE++RGITI T+HVEYET Sbjct: 6 FERTKPHVNIGTIGHVDHGKTTLTAAITKVLAEKGKAQFMAYDAIDKAPEERERGITINTSHVEYET 72
BLAST of CK933204 vs. ExPASy Swiss-Prot
Match: EFTU_CLOPS (Elongation factor Tu OS=Clostridium perfringens (strain SM101 / Type A) GN=tuf1 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 4.478e-25 Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 2 Query: 260 SMATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYETA 475 S A F R+K HVN+GTIGHVDHGKTTLTAAIT VLA+ G A+A +DEIDKAPEEK+RGITI TAHVEYETA Sbjct: 2 SKAKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAQAGGAEAFKYDEIDKAPEEKERGITINTAHVEYETA 73
BLAST of CK933204 vs. ExPASy Swiss-Prot
Match: EFTU_CLOPE (Elongation factor Tu OS=Clostridium perfringens GN=tufA PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 4.478e-25 Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 2 Query: 260 SMATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYETA 475 S A F R+K HVN+GTIGHVDHGKTTLTAAIT VLA+ G A+A +DEIDKAPEEK+RGITI TAHVEYETA Sbjct: 2 SKAKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAQAGGAEAFKYDEIDKAPEEKERGITINTAHVEYETA 73
BLAST of CK933204 vs. ExPASy Swiss-Prot
Match: EFTU_CLOP1 (Elongation factor Tu OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=tuf1 PE=3 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 4.478e-25 Identity = 56/72 (77.78%), Postives = 62/72 (86.11%), Query Frame = 2 Query: 260 SMATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYETA 475 S A F R+K HVN+GTIGHVDHGKTTLTAAIT VLA+ G A+A +DEIDKAPEEK+RGITI TAHVEYETA Sbjct: 2 SKAKFERSKPHVNIGTIGHVDHGKTTLTAAITTVLAQAGGAEAFKYDEIDKAPEEKERGITINTAHVEYETA 73
BLAST of CK933204 vs. ExPASy Swiss-Prot
Match: EFTU_GEOTN (Elongation factor Tu OS=Geobacillus thermodenitrificans (strain NG80-2) GN=tuf PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 5.848e-25 Identity = 54/69 (78.26%), Postives = 63/69 (91.30%), Query Frame = 2 Query: 266 ATFTRTKLHVNVGTIGHVDHGKTTLTAAITKVLAEEGKAKAIAFDEIDKAPEEKKRGITIATAHVEYET 472 A F RTK HVN+GTIGHVDHGKTTLTAAIT VLA++GKA+A A+D+ID APEE++RGITI+TAHVEYET Sbjct: 4 AKFERTKPHVNIGTIGHVDHGKTTLTAAITTVLAKQGKAEARAYDQIDAAPEERERGITISTAHVEYET 72 The following BLAST results are available for this feature:
BLAST of CK933204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933204 ID=CK933204; Name=CK933204; organism=Citrus sinensis; type=EST; length=477bpback to top |