CK933205

Overview
NameCK933205
Unique NameCK933205
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10325 contig Csv1_Contig10325:325..1017. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933205 vs. ExPASy Swiss-Prot
Match: HIBCH_DANRE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Danio rerio GN=hibch PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.790e-40
Identity = 93/217 (42.86%), Postives = 125/217 (57.60%), Query Frame = 3
Query:   15 ADNMVLVEEGASSRTIILNRPNVLNALLTPMGVRMTKLYESWEKDSRVGFVMIKGNG-RSFCAGGDVVTLYRLLSKGRVEECKECFRTFYSLMYRLNTYLKPHVAIMNGITMGGGAGLSVHGSFCIATEKTVFAIPEVLIGSHPDAGASYYLSHLPGHLGEYLGLTGGRLSGEELLACGFATHYIPSARLPLIEEQLRSLAVHDFSAMETFLAKHSE 662
            A + VL E+   +  I LNRP  LNAL   M   +    + W+KDS    V+IKG G ++FCAGGD+  +      G +   +  FR  Y L   + TY KP+VA++NGITMGGG GLSVHG F +ATEKT+FA+PE  IG  PD G  Y+L  L G LG +L LTG RL G ++   G ATH++ S ++  +E+ L  L     S +   L  + E
Sbjct:   30 AGSEVLFEKVGKAGVITLNRPKALNALTLNMIRHIYPQLKKWDKDSETDIVIIKGAGEKAFCAGGDIRAIAEAGKAGNLLS-QVFFREEYILNNTIGTYQKPYVALINGITMGGGVGLSVHGQFRVATEKTLFAMPETGIGLFPDVGGGYFLPRLQGKLGLFLALTGFRLKGRDVQRVGVATHFVQSEKIESLEKDLVDLKSPSISDVAQLLDSYQE 245          
BLAST of CK933205 vs. ExPASy Swiss-Prot
Match: HIBCH_CHICK (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Gallus gallus GN=HIBCH PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 3.790e-40
Identity = 91/205 (44.39%), Postives = 125/205 (60.98%), Query Frame = 3
Query:    6 CNDADNM--VLVEEGASSRTIILNRPNVLNALLTPMGVRMTKLYESWEKDSRVGFVMIKGNG-RSFCAGGDVVTLYRLLSKGRVEECKECFRTFYSLMYRLNTYLKPHVAIMNGITMGGGAGLSVHGSFCIATEKTVFAIPEVLIGSHPDAGASYYLSHLPGHLGEYLGLTGGRLSGEELLACGFATHYIPSARLPLIEEQLRSL 611
            C   D+   VL+++   +  I LNRP VLNAL   M  ++    ++WE+D     ++IKG G ++FCAGGDV  +      G     ++ FR  Y L   + T  KP+VA+++GITMGGG GLSVHG F +ATEKTVFA+PE  IG  PD G  Y+L  L G +G  L LTG RL G ++L  G ATH++ S +LP +E+ L +L
Sbjct:   28 CKHTDSAADVLLQKQGGAGIITLNRPKVLNALSFKMIQQIYPQIKAWEQDPETFLIIIKGTGEKAFCAGGDVRAIADAGKAGDTMT-RDYFREEYRLDNAIGTCKKPYVALIDGITMGGGVGLSVHGHFRVATEKTVFAMPETAIGLFPDVGGGYFLPRLSGKIGHLLALTGFRLKGRDVLKAGIATHFVESGKLPELEKDLIAL 231          
BLAST of CK933205 vs. ExPASy Swiss-Prot
Match: HIBCH_SCHPO (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Schizosaccharomyces pombe GN=ehd3 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 6.465e-40
Identity = 87/216 (40.28%), Postives = 125/216 (57.87%), Query Frame = 3
Query:   15 ADNMVLVEEGASSRTIILNRPNVLNALLTPMGVRMTKLYESWEKDSRVGFVMIKGNGRSFCAGGDVVTLYRLLSKGRVEECKECFRTFYSLMYRLNTYLKPHVAIMNGITMGGGAGLSVHGSFCIATEKTVFAIPEVLIGSHPDAGASYYLSHLPGHLGEYLGLTGGRLSGEELLACGFATHYIPSARLPLIEEQLRSLAVHDFSAMETFLAKHSE 662
            +++ VL E    +R   LNRP VLNA+   M   +     S E+ +    +++KGNGRSF +GGD+      +  G++ E +  F   Y L + L TY KP VA+MNGITMGGG+GL++H  F IA E T+FA+PE  IG   D  AS++ S LPG+ G YLGLT   + G + L  G ATH++P    P +E++L  L   D S +   + + +E
Sbjct:   54 SNDTVLYESKNGARIFTLNRPKVLNAINVDMIDSILPKLVSLEESNLAKVIILKGNGRSFSSGGDIKAAALSIQDGKLPEVRHAFAQEYRLSHTLATYQKPVVALMNGITMGGGSGLAMHVPFRIACEDTMFAMPETGIGYFTDVAASFFFSRLPGYFGTYLGLTSQIVKGYDCLRTGIATHFVPKHMFPHLEDRLAELNTSDISKINNTILEFAE 269          
BLAST of CK933205 vs. ExPASy Swiss-Prot
Match: HIBCH_HUMAN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Homo sapiens GN=HIBCH PE=1 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 4.190e-39
Identity = 87/201 (43.28%), Postives = 121/201 (60.20%), Query Frame = 3
Query:   12 DADNMVLVEEGASSRTIILNRPNVLNALLTPMGVRMTKLYESWEKDSRVGFVMIKG-NGRSFCAGGDVVTLYRLLSKGRVEECKECFRTFYSLMYRLNTYLKPHVAIMNGITMGGGAGLSVHGSFCIATEKTVFAIPEVLIGSHPDAGASYYLSHLPGHLGEYLGLTGGRLSGEELLACGFATHYIPSARLPLIEEQLRSL 611
            DA   VL+E+   +  I LNRP  LNAL   M  ++    + WE+D     ++IKG  G++FCAGGD+  +     K + +     FR  Y L   + +  KP+VA+++GITMGGG GLSVHG F +ATEK +FA+PE  IG  PD G  Y+L  L G LG +L LTG RL G ++   G ATH++ S +L ++EE L +L
Sbjct:   33 DAAEEVLLEKKGCTGVITLNRPKFLNALTLNMIRQIYPQLKKWEQDPETFLIIIKGAGGKAFCAGGDIRVISEA-EKAKQKIAPVFFREEYMLNNAVGSCQKPYVALIHGITMGGGVGLSVHGQFRVATEKCLFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYRAGIATHFVDSEKLAMLEEDLLAL 232          
BLAST of CK933205 vs. ExPASy Swiss-Prot
Match: HIBCH_BOVIN (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Bos taurus GN=HIBCH PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.592e-38
Identity = 88/204 (43.14%), Postives = 124/204 (60.78%), Query Frame = 3
Query:   12 DADNMVLVEEGASSRTIILNRPNVLNALLTPMGVRMTKLYESWEKDSRVGFVMIKGNG-RSFCAGGDVVTLYRLLSKGRVEECK---ECFRTFYSLMYRLNTYLKPHVAIMNGITMGGGAGLSVHGSFCIATEKTVFAIPEVLIGSHPDAGASYYLSHLPGHLGEYLGLTGGRLSGEELLACGFATHYIPSARLPLIEEQLRSL 611
            DA   VL+E    +  I LNRP  LN L   M  ++    + WE+D +   ++IKG G ++FCAGGD+    R LS+ R    K   + FR  Y L   +++  KP++A+++GITMGGG G+SVHG F +ATEK+VFA+PE  IG  PD G  Y+L  L G LG +L LTG RL G ++   G ATH++   +L ++EE L +L
Sbjct:   33 DAAAEVLLERKGCAGVITLNRPRFLNTLTLGMIRQIYAQLKKWEQDPKTFLIIIKGAGEKAFCAGGDI----RALSEARNTNQKMLQDLFREEYILNNAIDSCQKPYIALIHGITMGGGVGVSVHGQFRVATEKSVFAMPETAIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVYTAGIATHFVDFEKLGMLEEDLLAL 232          
BLAST of CK933205 vs. ExPASy Swiss-Prot
Match: HIBCH_XENTR (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus tropicalis GN=hibch PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.716e-38
Identity = 86/196 (43.88%), Postives = 116/196 (59.18%), Query Frame = 3
Query:   18 DNMVLVEEGASSRTIILNRPNVLNALLTPMGVRMTKLYESWEKDSRVGFVMIKG-NGRSFCAGGDVVTLYRLLSKGRVEECKECFRTFYSLMYRLNTYLKPHVAIMNGITMGGGAGLSVHGSFCIATEKTVFAIPEVLIGSHPDAGASYYLSHLPGHLGEYLGLTGGRLSGEELLACGFATHYIPSARLPLIEEQL 602
            D   L+ +   +  I LNRP  LNAL   M   +      WE+D     V+IKG  G++FCAGGD+  +     K      ++ FR  Y L   + TY KP+VA+++GITMGGG GLSVHG F +A+E T+FA+PE  IG  PD G  Y+L  LPG LG YL LTG RL G ++   G ATH++ S ++P +E+ L
Sbjct:   34 DGECLLTKAGCAGVITLNRPKALNALNLGMIRLIYPQLGLWEEDPETYLVIIKGVGGKAFCAGGDIRAVTDA-GKAGDRLAQDFFREEYILNNAIGTYKKPYVALIDGITMGGGVGLSVHGHFRVASENTLFAMPETAIGLFPDVGGGYFLPRLPGKLGLYLALTGFRLKGSDVQKAGIATHFVESEKIPSLEQDL 228          
BLAST of CK933205 vs. ExPASy Swiss-Prot
Match: HIBCH_RAT (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Rattus norvegicus GN=Hibch PE=1 SV=2)

HSP 1 Score: 158.688 bits (400), Expect = 2.716e-38
Identity = 85/196 (43.37%), Postives = 122/196 (62.24%), Query Frame = 3
Query:   27 VLVEEGASSRTIILNRPNVLNALLTPMGVRMTKLYESWEKDSRVGFVMIKG-NGRSFCAGGDVVTLYRLLSKGRVEECKECFRTFYSLMYRLNTYLKPHVAIMNGITMGGGAGLSVHGSFCIATEKTVFAIPEVLIGSHPDAGASYYLSHLPGHLGEYLGLTGGRLSGEELLACGFATHYIPSARLPLIEEQLRSL 611
            VL+E    +  I LNRP +LNAL   M  ++    + WE+D     ++IKG  G++FCAGGD+  L      G+    ++ FR  Y L   + +  KP+VA+++GITMGGG GLSVHG F +ATE+++FA+PE  IG  PD G  Y+L  L G LG +L LTG RL G ++   G ATH++ S +L ++EE+L +L
Sbjct:   37 VLLERRGCAGVITLNRPKLLNALSLNMIRQIYPQLKKWERDPDTFLIIIKGAGGKAFCAGGDIKALSEAKKAGQTLS-QDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQGKLGYFLALTGFRLKGRDVHRAGIATHFVDSEKLHVLEEELLAL 231          
BLAST of CK933205 vs. ExPASy Swiss-Prot
Match: HIBCH_MOUSE (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Mus musculus GN=Hibch PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.716e-38
Identity = 86/196 (43.88%), Postives = 121/196 (61.73%), Query Frame = 3
Query:   27 VLVEEGASSRTIILNRPNVLNALLTPMGVRMTKLYESWEKDSRVGFVMIKG-NGRSFCAGGDVVTLYRLLSKGRVEECKECFRTFYSLMYRLNTYLKPHVAIMNGITMGGGAGLSVHGSFCIATEKTVFAIPEVLIGSHPDAGASYYLSHLPGHLGEYLGLTGGRLSGEELLACGFATHYIPSARLPLIEEQLRSL 611
            VL+E       I LNRP  LNAL   M  ++    ++WE+D     ++IKG  G++FCAGGD+  L     K R    ++ FR  Y L   + +  KP+VA+++GITMGGG GLSVHG F +ATE+++FA+PE  IG  PD G  Y+L  L G LG +L LTG RL G ++   G ATH++ S +L ++EE+L +L
Sbjct:   37 VLLERRGCGGVITLNRPKFLNALSLNMIRQIYPQLKTWEQDPDTFLIIIKGAGGKAFCAGGDIKALSEA-KKARQNLTQDLFREEYILNNAIASCQKPYVALIDGITMGGGVGLSVHGQFRVATERSLFAMPETGIGLFPDVGGGYFLPRLQGKLGYFLALTGYRLKGRDVHRAGIATHFVDSEKLRVLEEELLAL 231          
BLAST of CK933205 vs. ExPASy Swiss-Prot
Match: HIBCH_XENLA (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Xenopus laevis GN=hibch PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 3.003e-37
Identity = 86/198 (43.43%), Postives = 119/198 (60.10%), Query Frame = 3
Query:   18 DNMVLVEEGASSRTIILNRPNVLNALLTPMGVRMTKLYESWEKDSRVGFVMIKG-NGRSFCAGGDVVTLYRLLSKGRVEE--CKECFRTFYSLMYRLNTYLKPHVAIMNGITMGGGAGLSVHGSFCIATEKTVFAIPEVLIGSHPDAGASYYLSHLPGHLGEYLGLTGGRLSGEELLACGFATHYIPSARLPLIEEQL 602
            D   L+ +   +  I LNRP  LNAL   M  ++    + WE+D     V+IKG  G++FCAGGD+  +      G+V +   ++ FR  Y L   + T  KP+VA+++GITMGGG GLSVHG F +A+EKT+FA+PE  IG  PD G  Y+L  L G LG YL LTG RL G ++   G ATH++ S +L  +E+ L
Sbjct:   34 DGGCLLTKAGCAGVITLNRPKALNALNLGMIRQIYPQLKLWEEDPETYLVIIKGAGGKAFCAGGDIRAV---TDAGKVGDRLAQDFFREEYILNNAIGTCKKPYVAVIDGITMGGGVGLSVHGHFRVASEKTLFAMPETAIGLFPDVGGGYFLPRLTGKLGLYLALTGFRLKGSDVQKAGIATHFVESEKLSSLEQDL 228          
BLAST of CK933205 vs. ExPASy Swiss-Prot
Match: HIBCH_DICDI (3-hydroxyisobutyryl-CoA hydrolase, mitochondrial OS=Dictyostelium discoideum GN=hibch PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.462e-31
Identity = 81/220 (36.82%), Postives = 114/220 (51.82%), Query Frame = 3
Query:   27 VLVEEGASSRTIILNRPNVLNALLTPMGVRMTKLY-ESWEKDSRVGFVMIKGNG-RSFCAGGDVVTLYRLLSKGRVEECKE------CFRTFYSLMYRLNTYLKPHVAIMNGITMGGGAGLSVHGSFCIATEKTVFAIPEVLIGSHPDAGASYYLSHLPGHLGEYLGLTGGRLSGEELLACGFATHYIPSARLPLIEEQLRSLAVHDFSAMETFLAKHSE 662
            VL E+      ++LNRP  LNAL   M   +T  Y E   K    G +++KG G ++FCAGGD+  +Y        ++ K        FR  Y L   + T     V+I NG  MGGG GLSVHG F +ATE TVFA+PE  IG   D G SY+L  LP + G YL LTG +L G  +   G ATH++ +  +  +E+++          + + L K+ +
Sbjct:   25 VLFEKKGKCLKVLLNRPKALNALNPNMVKILTPKYLEMKTKKDGEGVIVMKGAGEKAFCAGGDIRAIYDYKQLNEEQKSKTNDIGDLFFREEYILNNLIGTNPIAQVSIYNGFAMGGGIGLSVHGKFRVATENTVFAMPETGIGFFCDVGGSYFLPRLPNNYGMYLALTGSKLKGNNVYLAGVATHFVSNEHIQALEKEIEECENPTSQTINSILTKYHD 244          
The following BLAST results are available for this feature:
BLAST of CK933205 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
HIBCH_DANRE3.790e-4042.863-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_CHICK3.790e-4044.393-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_SCHPO6.465e-4040.283-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_HUMAN4.190e-3943.283-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_BOVIN1.592e-3843.143-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_XENTR2.716e-3843.883-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_RAT2.716e-3843.373-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_MOUSE2.716e-3843.883-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_XENLA3.003e-3743.433-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]
HIBCH_DICDI2.462e-3136.823-hydroxyisobutyryl-CoA hydrolase, mitochondrial O... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004289_C07 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933205 ID=CK933205; Name=CK933205; organism=Citrus sinensis; type=EST; length=693bp
ACGATTGCAACGATGCCGACAACATGGTACTGGTTGAAGAAGGGGCAAGC
TCACGAACTATCATACTCAACAGACCCAATGTCCTGAATGCTCTGCTTAC
TCCCATGGGTGTTCGGATGACTAAATTATACGAGTCCTGGGAGAAAGATT
CCCGAGTTGGTTTTGTCATGATTAAGGGAAATGGCAGGTCATTCTGTGCT
GGTGGAGATGTTGTAACCTTGTATCGGTTGCTTAGCAAAGGGAGAGTGGA
AGAATGTAAAGAATGTTTCAGAACATTCTACAGCTTAATGTACCGTTTAA
ACACATATTTGAAGCCACATGTAGCTATCATGAATGGAATTACAATGGGT
GGTGGTGCAGGACTTTCTGTCCATGGTTCGTTTTGCATTGCAACTGAGAA
AACTGTGTTCGCTATTCCTGAAGTACTTATTGGTTCGCATCCTGATGCTG
GGGCTTCATATTATCTTTCACATTTGCCTGGTCACTTAGGAGAATATCTG
GGTCTAACTGGAGGGAGGCTTAGTGGAGAAGAGCTGCTAGCTTGTGGATT
TGCTACTCACTACATACCCAGTGCAAGACTTCCACTGATCGAAGAGCAAC
TCCGTTCATTAGCTGTGCATGATTTTTCTGCCATGGAAACTTTTCTTGCA
AAGCACAGCGAGCATGTGTATCCAAATGAAAACAGTATTCTTC
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