CK933209

Overview
NameCK933209
Unique NameCK933209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933209 vs. ExPASy Swiss-Prot
Match: TRNH_DATST (Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 9.013e-56
Identity = 104/194 (53.61%), Postives = 137/194 (70.62%), Query Frame = 3
Query:  141 NQRWTVQGMTALVTGGTKGLGHXXXXXXXXXXXXXHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLTXXXXXXXXXXXXXXIYGATKGAMNHLARILACEWAQDNIRTNSVSPWFVAT 722
            ++RW+++GMTALVTGGT+G+G+             +TCSR++ DL EC+  W+ KGFKV+G VCDVSS  +R+ L+  V+S F+GKLNILINN GTTI K    +TAED+S +M TNFE++YNLCQLAHPLLKASG ASIV                IY A+KGA+N + + LACEWA+D+IR N+V+PW + T
Sbjct:   10 DRRWSLRGMTALVTGGTRGIGYAIVEELANFGAEVYTCSRSQNDLDECLEKWRRKGFKVSGPVCDVSSISQRQTLMESVTSSFNGKLNILINNAGTTIPKEATNFTAEDYSIIMGTNFEASYNLCQLAHPLLKASGNASIVFN-SSAAGVIAVPLSSIYAASKGAINQVTKSLACEWAKDSIRVNAVAPWIINT 202          
BLAST of CK933209 vs. ExPASy Swiss-Prot
Match: TRNH1_ARATH (Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 4.473e-55
Identity = 108/194 (55.67%), Postives = 134/194 (69.07%), Query Frame = 3
Query:  141 NQRWTVQGMTALVTGGTKGLGHXXXXXXXXXXXXXHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLTXXXXXXXXXXXXXXIYGATKGAMNHLARILACEWAQDNIRTNSVSPWFVAT 722
            +QRW+++  T LVTGGTKG+GH             HTC+RNE +L+EC+  W+ KGF+VTGSVCD S R EREKL+  VSS+F GKL+ILINN+G    K T++YTAEDFSF ++TN ESAY+L QLAHPLLKASG  +I+                IY ATKGA+N LAR LACEWA D IR N+V+P  +AT
Sbjct:    7 SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIF-MSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIAT 199          
BLAST of CK933209 vs. ExPASy Swiss-Prot
Match: TRN2_DATST (Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.067e-48
Identity = 94/192 (48.96%), Postives = 127/192 (66.15%), Query Frame = 3
Query:  147 RWTVQGMTALVTGGTKGLGHXXXXXXXXXXXXXHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLTXXXXXXXXXXXXXXIYGATKGAMNHLARILACEWAQDNIRTNSVSPWFVAT 722
            RW ++G TALVTGG++G+G+             +TCSRN+ +L++C+  W++KGFKV  SVCD+SSR ER++L+N V++ F GKLNIL+NN G  I K   +YT ED+S +M+ NFE+AY+L  LAHP LKAS   ++V                +YGATKGAM+ L R LA EWA+DNIR N V P  +AT
Sbjct:    4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVF-ISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIAT 194          
BLAST of CK933209 vs. ExPASy Swiss-Prot
Match: TRN1_DATST (Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.917e-48
Identity = 90/192 (46.88%), Postives = 127/192 (66.15%), Query Frame = 3
Query:  147 RWTVQGMTALVTGGTKGLGHXXXXXXXXXXXXXHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLTXXXXXXXXXXXXXXIYGATKGAMNHLARILACEWAQDNIRTNSVSPWFVAT 722
            RW+++G TALVTGG+KG+G+             +TCSRNE +L EC+  W+ KG  V GSVCD+ SR ER+KL+  V+ +FDGKLNIL+NN G  I K   ++T +D++ +M TNFE+AY+L Q+A+PLLKAS   +++                +Y A+KGA+N + + LACEWA+DNIR NSV+P  + T
Sbjct:   16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIF-LSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILT 206          
BLAST of CK933209 vs. ExPASy Swiss-Prot
Match: TRN2_HYONI (Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.180e-47
Identity = 94/192 (48.96%), Postives = 123/192 (64.06%), Query Frame = 3
Query:  147 RWTVQGMTALVTGGTKGLGHXXXXXXXXXXXXXHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLTXXXXXXXXXXXXXXIYGATKGAMNHLARILACEWAQDNIRTNSVSPWFVAT 722
            RW ++G TALVTGG++G+G+             +TCSRN+ +L EC+  W++KGF V  SVCD+SSR ERE+ +  VS+ F GKLNIL+NN G  I K   +YT ED+S +M+ NFE+AY+L  LAHP LKAS   ++V                +YGATKGAM+ L R LA EWA+DNIR N V P  +AT
Sbjct:    4 RWNLEGCTALVTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVEASVCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAKDYTMEDYSHIMSINFEAAYHLSVLAHPFLKASERGNVVF-ISSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIAT 194          
BLAST of CK933209 vs. ExPASy Swiss-Prot
Match: MTDH_AGABI (NADP-dependent mannitol dehydrogenase OS=Agaricus bisporus GN=mtdH PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.043e-11
Identity = 57/193 (29.53%), Postives = 81/193 (41.97%), Query Frame = 3
Query:  168 TALVTGGTKGLGHXXXXXXXXXXXXXHTCSRNEADLSECIRD-WKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPL-LKASGAASIVLTXXXXXXXXXXXXXX------IYGATKGAMNHLARILACEWAQDNIRTNSVSPWFVAT 722
            T +VTGG +G+G                  R+  D  E      K  G K     CDVS+     K I Q+ +   G ++ LI N G ++ K   E T EDF F+   N    +N C+    L L+     SIV+T                     Y ++K A ++L + LA EWA   IR N++SP +V T
Sbjct:   13 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAKDAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL-GAISGLIANAGVSVVKPATELTHEDFKFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNT 204          
BLAST of CK933209 vs. ExPASy Swiss-Prot
Match: SOU1_SCHPO (Sorbose reductase sou1 OS=Schizosaccharomyces pombe GN=sou1 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.324e-11
Identity = 55/198 (27.78%), Postives = 83/198 (41.92%), Query Frame = 3
Query:  138 LNQRWTVQGMTALVTGGTKGLGHXXXXXXXXXXXXXHTC-SRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFDGKLNILINNVGTTIRKATVEYTAED-FSFLMATNFESAYNLCQLAHPLLKASGAASIVLTXXXXXXXXXXXXXXI-YGATKGAMNHLARILACEWAQDNIRTNSVSPWFVAT 722
            +   ++++G T L+TGG+ G+G                   RN+  L          G +     C + +R    +  NQ      G+L+++I N G  I   ++E   ED ++ ++  N   AY   Q A    K  G  S++ T                Y ATK A+ HLAR LA EWA    R NSVSP ++ T
Sbjct:    1 MTSMFSLKGKTTLITGGSGGIGFSIAKAFAAAGSNVGLLYGRNKKALEYAAELRDKHGVQAKAYSCPIENRSAVIETTNQAVEELGGRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYYTAQAAGHHFKKQGKGSLIFTASMSGHIANWPQQWASYHATKAAVKHLARALAVEWA-PFARVNSVSPGYIDT 197          
BLAST of CK933209 vs. ExPASy Swiss-Prot
Match: GNO_GLUOX (Gluconate 5-dehydrogenase OS=Gluconobacter oxydans GN=gno PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.832e-11
Identity = 49/193 (25.39%), Postives = 91/193 (47.15%), Query Frame = 3
Query:  150 WTVQGMTALVTGGTKGLGHXXXXXXXXXXXXXHTCSRNEADLSECIRDWKTKGFKVTGSVCDVSSRIEREKLINQVSSLFD--GKLNILINNVGTTIRKATVEYTAEDFSFLMATNFESAYNLCQLAHPLLKASGAASIVLTXXXXXXXXXXXXXXIYGATKGAMNHLARILACEWAQDNIRTNSVSPWFVAT 722
            +++ G  ALVTG ++G+G                  RN   L      ++ +G K + +V DV+   +++ +I+ V+++    G ++ILINN G   R    E++ +D+  LM+TN  + + + Q     +   G   IV                 Y ATKGA+ +L + +A +W +  ++ N ++P + AT
Sbjct:    7 FSLSGARALVTGASRGIGLTLAKGLARYGAEVVLNGRNAESLDSAQSGFEAEGLKASTAVFDVT---DQDAVIDGVAAIERDMGPIDILINNAGIQRRAPLEEFSRKDWDDLMSTNVNAVFFVGQAVARHMIPRGRGKIV-NICSVQSELARPGIAPYTATKGAVKNLTKGMATDWGRHGLQINGLAPGYFAT 195          
The following BLAST results are available for this feature:
BLAST of CK933209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
TRNH_DATST9.013e-5653.61Tropinone reductase homolog OS=Datura stramonium P... [more]
TRNH1_ARATH4.473e-5555.67Tropinone reductase homolog At1g07440 OS=Arabidops... [more]
TRN2_DATST1.067e-4848.96Tropinone reductase 2 OS=Datura stramonium GN=TR2 ... [more]
TRN1_DATST6.917e-4846.88Tropinone reductase 1 OS=Datura stramonium GN=TR1 ... [more]
TRN2_HYONI1.180e-4748.96Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 P... [more]
MTDH_AGABI1.043e-1129.53NADP-dependent mannitol dehydrogenase OS=Agaricus ... [more]
SOU1_SCHPO2.324e-1127.78Sorbose reductase sou1 OS=Schizosaccharomyces pomb... [more]
GNO_GLUOX8.832e-1125.39Gluconate 5-dehydrogenase OS=Gluconobacter oxydans... [more]
back to top
Properties
Property NameValue
Genbank descriptionCGF1004289_C12 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IVF_C12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933209 ID=CK933209; Name=CK933209; organism=Citrus sinensis; type=EST; length=723bp
GGGGAAAGATTCCTGCGAGCCCATTATAAAAGGATGAACTAATGTTCAAT
CTATTTAATTAGCTTAGTGTGTGAAGTTCACTTTAACTTTTATCACCTTT
ATTTCGAATGGCGCCTCCGACGAACGGCAATGGCAGGCTCAATCAGAGAT
GGACTGTCCAGGGAATGACTGCGCTTGTAACTGGTGGAACCAAAGGACTA
GGTCATGCTGTAGTGGAGGAACTGGCTGAGCTTGGTGCCGCTGTGCATAC
ATGCTCTAGGAATGAAGCAGATCTTAGTGAATGCATACGTGACTGGAAAA
CTAAAGGCTTCAAAGTCACCGGTTCAGTGTGCGATGTATCATCTCGAATT
GAACGGGAAAAGCTTATAAACCAAGTCTCCTCTCTGTTCGATGGAAAACT
TAACATTCTCATAAACAACGTCGGGACGACTATAAGAAAGGCGACTGTGG
AGTACACAGCAGAAGATTTCTCGTTTCTCATGGCTACCAATTTTGAGTCT
GCTTACAATCTGTGCCAACTTGCACATCCTCTTTTGAAAGCTTCGGGGGC
AGCAAGTATTGTTCTAACGTCTTCTGTTTGTGGGGTGGTGTCAGTTGTTG
ACGTTGGATCCATATATGGAGCTACGAAAGGAGCCATGAACCATCTTGCG
AGGATTTTGGCATGCGAGTGGGCTCAAGATAATATTAGGACCAATTCTGT
CTCACCTTGGTTCGTCGCGACTC
back to top