CK933242
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A6_ORYSJ (Probable histone H2A.6 OS=Oryza sativa subsp. japonica GN=Os05g0113900 PE=2 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 2.913e-33 Identity = 71/100 (71.00%), Postives = 77/100 (77.00%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTNER 303 QFPVGRIGR+LKKGRY+QRVG+GAP GNAARDNKK +IIPRHV LA+RNDEELGKLL GVTIA GGVLPNINPVLLPKKT E+ Sbjct: 35 QFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEK 134
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A6_ORYSI (Probable histone H2A.6 OS=Oryza sativa subsp. indica GN=OsI_017523 PE=3 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 2.913e-33 Identity = 71/100 (71.00%), Postives = 77/100 (77.00%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTNER 303 QFPVGRIGR+LKKGRY+QRVG+GAP GNAARDNKK +IIPRHV LA+RNDEELGKLL GVTIA GGVLPNINPVLLPKKT E+ Sbjct: 35 QFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEK 134
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A1_SOLLC (Histone H2A.1 OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 2.913e-33 Identity = 72/97 (74.23%), Postives = 76/97 (78.35%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKT 294 QFPVGRIGR+LKKGRY+QRVGSGAP GNAARDNKK +IIPRHV LAVRNDEELGKLL GVTIASGGVLPNINPVLLPKK+ Sbjct: 31 QFPVGRIGRYLKKGRYAQRVGSGAPIYLAAVLEYLAAEVLELAGNAARDNKKSRIIPRHVLLAVRNDEELGKLLAGVTIASGGVLPNINPVLLPKKS 127
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A5_ORYSJ (Probable histone H2A.5 OS=Oryza sativa subsp. japonica GN=Os01g0502700 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.804e-33 Identity = 70/100 (70.00%), Postives = 77/100 (77.00%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTNER 303 QFPVGRIGR+LKKGRY+QR+G+GAP GNAARDNKK +IIPRHV LA+RNDEELGKLL GVTIA GGVLPNINPVLLPKKT E+ Sbjct: 38 QFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEK 137
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A5_ORYSI (Probable histone H2A.5 OS=Oryza sativa subsp. indica GN=OsI_002060 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 3.804e-33 Identity = 70/100 (70.00%), Postives = 77/100 (77.00%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTNER 303 QFPVGRIGR+LKKGRY+QR+G+GAP GNAARDNKK +IIPRHV LA+RNDEELGKLL GVTIA GGVLPNINPVLLPKKT E+ Sbjct: 38 QFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEK 137
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A_EUPES (Histone H2A OS=Euphorbia esula PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 4.968e-33 Identity = 72/99 (72.73%), Postives = 75/99 (75.76%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTNE 300 QFPVGRIGRFLKKGRY+QRVGSGAP GNAARDNKK +IIPRHV LAVRNDEELGKLL GVTIA GGVLPNINPVLLPKK + Sbjct: 33 QFPVGRIGRFLKKGRYAQRVGSGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKAEK 131
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A2_MEDTR (Probable histone H2A.2 OS=Medicago truncatula GN=MtrDRAFT_AC149210g4v1 PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 8.475e-33 Identity = 71/97 (73.20%), Postives = 75/97 (77.32%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKT 294 QFPVGRIGR+LKKGRY+QRVG+GAP GNAARDNKK +IIPRHV LAVRNDEELGKLL GVTIA GGVLPNINPVLLPKKT Sbjct: 33 QFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKT 129
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A_PETCR (Histone H2A OS=Petroselinum crispum PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.888e-32 Identity = 70/100 (70.00%), Postives = 76/100 (76.00%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKTNER 303 QFPVGRIGR+LKKGRY+QRVG+GAP GNAARDNKK +IIPRH+ LAVRNDEELGKLL GVT A GGVLPNINPVLLPKKT E+ Sbjct: 32 QFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKTRIIPRHLLLAVRNDEELGKLLAGVTFAHGGVLPNINPVLLPKKTAEK 131
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A4_ORYSJ (Probable histone H2A.4 OS=Oryza sativa subsp. japonica GN=Os05g0461400 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.888e-32 Identity = 69/97 (71.13%), Postives = 75/97 (77.32%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKT 294 QFPVGRIGR+LK+GRYSQR+G+GAP GNAARDNKK +IIPRHV LA+RNDEELGKLL GVTIA GGVLPNINPVLLPKKT Sbjct: 36 QFPVGRIGRYLKQGRYSQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKT 132
BLAST of CK933242 vs. ExPASy Swiss-Prot
Match: H2A4_ORYSI (Probable histone H2A.4 OS=Oryza sativa subsp. indica GN=OsI_019561 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.888e-32 Identity = 69/97 (71.13%), Postives = 75/97 (77.32%), Query Frame = 1 Query: 4 QFPVGRIGRFLKKGRYSQRVGSGAPXXXXXXXXXXXXXXXXXXGNAARDNKKKKIIPRHVQLAVRNDEELGKLLTGVTIASGGVLPNINPVLLPKKT 294 QFPVGRIGR+LK+GRYSQR+G+GAP GNAARDNKK +IIPRHV LA+RNDEELGKLL GVTIA GGVLPNINPVLLPKKT Sbjct: 36 QFPVGRIGRYLKQGRYSQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKT 132 The following BLAST results are available for this feature:
BLAST of CK933242 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 236
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933242 ID=CK933242; Name=CK933242; organism=Citrus sinensis; type=EST; length=557bpback to top |