CK933246
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933246 vs. ExPASy Swiss-Prot
Match: MSBP2_ARATH (Membrane steroid-binding protein 2 OS=Arabidopsis thaliana GN=MSBP2 PE=1 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 2.025e-73 Identity = 143/187 (76.47%), Postives = 158/187 (84.49%), Query Frame = 2 Query: 119 MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQMEPLPPPVQLGKITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYRFMSKYVKVGSIKSTVPVTDGASSGESTEPKE 679 M Q+WETLKE ITAYTGLSPAAFFTV+AL +A+Y V+SG F S + H + RS E + Q EPLPPPVQLG+ITEEELK YDGSDSKKPLLMAIK QIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFE++DLTGDISGLG FELEALQDWEY+FMSKYVKVG+I+ DG ES+EP E Sbjct: 1 MVQQIWETLKETITAYTGLSPAAFFTVLALAFAVYQVVSGFFVSPEVH-RPRSLEVQPQSEPLPPPVQLGEITEEELKLYDGSDSKKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEDQDLTGDISGLGAFELEALQDWEYKFMSKYVKVGTIQK----KDGEGK-ESSEPSE 181
BLAST of CK933246 vs. ExPASy Swiss-Prot
Match: MSBP1_ARATH (Membrane steroid-binding protein 1 OS=Arabidopsis thaliana GN=MSBP1 PE=1 SV=2) HSP 1 Score: 262.307 bits (669), Expect = 1.774e-69 Identity = 133/190 (70.00%), Postives = 152/190 (80.00%), Query Frame = 2 Query: 119 MALQLWETLKEAITAYTGLSPAAFFTVVALLWAIYYVLSGMFGS---SDNHHQQRSREYEEQMEPLPPPVQLGKITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYRFMSKYVKVGSIKSTVPVTDGASSGESTEPKE 679 MAL+LW+TLKEAI AYTGLSP FFT +AL +AIY V+SG F S N HQ+ +E+ P+P PVQ+G+ITEEELKQYDGSD +KPLLMAIK QIYDV+QSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLT D+SGLGPFEL+ALQDWEY+FMSKY KVG++K + AS E TE E Sbjct: 1 MALELWQTLKEAIHAYTGLSPVVFFTALALAFAIYQVISGWFASPFDDVNRHQRARSLAQEEEPPIPQPVQVGEITEEELKQYDGSDPQKPLLMAIKHQIYDVTQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTWDVSGLGPFELDALQDWEYKFMSKYAKVGTVKVAGSEPETASVSEPTENVE 190
BLAST of CK933246 vs. ExPASy Swiss-Prot
Match: SBP3_ARATH (Probable steroid-binding protein 3 OS=Arabidopsis thaliana GN=MP3 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.125e-22 Identity = 48/99 (48.48%), Postives = 69/99 (69.70%), Query Frame = 2 Query: 329 KITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYRFMSKYVKVGSIKS 625 + T E+L QY+G+D KP+ +AIK +++DV+ + FYG GG Y++FAGKDASRAL KMS E+D++ + GL E+ L DWE +F +KY VG + S Sbjct: 2 EFTAEQLSQYNGTDESKPIYVAIKGRVFDVTTGKSFYGSGGDYSMFAGKDASRALGKMSKNEEDVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVVS 100
BLAST of CK933246 vs. ExPASy Swiss-Prot
Match: NENF_RAT (Neudesin OS=Rattus norvegicus GN=Nenf PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.872e-19 Identity = 52/114 (45.61%), Postives = 71/114 (62.28%), Query Frame = 2 Query: 311 PPVQLGKITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQD-WEYRFMSKYVKVGSIKSTVPVTDGA 649 PPV+L TEEEL +Y G + +P+ +A+K ++DV+ + FYG G PY AGKD+SR +AKMS + DLT DISGL ELEAL D + + +KY VG + DG+ Sbjct: 41 PPVRL--FTEEELARYSGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPADLTHDISGLTAKELEALDDIFSKVYKAKYPIVGYTARRILNEDGS 152
BLAST of CK933246 vs. ExPASy Swiss-Prot
Match: NENF_MOUSE (Neudesin OS=Mus musculus GN=Nenf PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18 Identity = 50/114 (43.86%), Postives = 70/114 (61.40%), Query Frame = 2 Query: 311 PPVQLGKITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQD-WEYRFMSKYVKVGSIKSTVPVTDGA 649 PPV+L TEEEL +Y G + +P+ +A+K ++DV+ + FYG G PY AGKD+SR +AKMS + DLT D +GL ELEAL D + + +KY VG + DG+ Sbjct: 41 PPVRL--FTEEELARYGGEEEDQPIYLAVKGVVFDVTSGKEFYGRGAPYNALAGKDSSRGVAKMSLDPADLTHDTTGLTAKELEALDDVFSKVYKAKYPIVGYTARRILNEDGS 152
BLAST of CK933246 vs. ExPASy Swiss-Prot
Match: NENF_BOVIN (Neudesin OS=Bos taurus GN=NENF PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.576e-17 Identity = 49/114 (42.98%), Postives = 69/114 (60.53%), Query Frame = 2 Query: 311 PPVQLGKITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELEALQDWEYR-FMSKYVKVGSIKSTVPVTDGA 649 PPV+L TEEEL +Y G + +P+ MA+K ++DV+ + FYG G PY GKD++R +AKMS + DLT D +GL ELE+L D R + +KY VG + DG+ Sbjct: 39 PPVRL--FTEEELARYGGEEEDQPIYMAVKGVVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDPADLTHDTTGLTAEELESLDDVFTRVYKAKYPIVGYTARRILNEDGS 150
BLAST of CK933246 vs. ExPASy Swiss-Prot
Match: PGRC1_RAT (Membrane-associated progesterone receptor component 1 OS=Rattus norvegicus GN=Pgrmc1 PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 2.688e-17 Identity = 48/110 (43.64%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 308 PPPVQLGK---ITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYRFMSKYVKVGSI 619 PPP+ K T EL++YDG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA ++ KD D+S L P + E L DW+ +F KY VG + Sbjct: 62 PPPLPRLKPRDFTPAELRRYDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKL 170
BLAST of CK933246 vs. ExPASy Swiss-Prot
Match: PGRC1_PIG (Membrane-associated progesterone receptor component 1 OS=Sus scrofa GN=PGRMC1 PE=1 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17 Identity = 50/151 (33.11%), Postives = 81/151 (53.64%), Query Frame = 2 Query: 176 SPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQMEPLPPPVQLGKITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYRFMSKYVKVGSI 619 SP + ++ +Y ++ G Q + + ++ P P ++ T EL+++DG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA ++ KD D+S L P + E L DW+ +F KY VG + Sbjct: 28 SPLNLLLLGLCIFLLYKIVRG--------DQPAASDSDDDEPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKL 169
BLAST of CK933246 vs. ExPASy Swiss-Prot
Match: PGRC1_BOVIN (Membrane-associated progesterone receptor component 1 OS=Bos taurus GN=PGRMC1 PE=2 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 4.585e-17 Identity = 50/151 (33.11%), Postives = 81/151 (53.64%), Query Frame = 2 Query: 176 SPAAFFTVVALLWAIYYVLSGMFGSSDNHHQQRSREYEEQMEPLPPPVQLGKITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYRFMSKYVKVGSI 619 SP + ++ +Y ++ G Q + + ++ P P ++ T EL+++DG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA ++ KD D+S L P + E L DW+ +F KY VG + Sbjct: 28 SPLNLLLLGLCIFLLYKIVRG--------DQPAASDSDDDEPPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKL 169
BLAST of CK933246 vs. ExPASy Swiss-Prot
Match: PGRC1_MOUSE (Membrane-associated progesterone receptor component 1 OS=Mus musculus GN=Pgrmc1 PE=1 SV=4) HSP 1 Score: 87.4261 bits (215), Expect = 7.822e-17 Identity = 47/110 (42.73%), Postives = 67/110 (60.91%), Query Frame = 2 Query: 308 PPPVQLGK---ITEEELKQYDGSDSKKPLLMAIKSQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEE---KDLTGDISGLGPFELEALQDWEYRFMSKYVKVGSI 619 PPP+ K T EL+++DG + +LMAI +++DV++ R FYGP GPY +FAG+DASR LA ++ KD D+S L P + E L DW+ +F KY VG + Sbjct: 62 PPPLPRLKRRDFTPAELRRFDGVQDPR-ILMAINGKVFDVTKGRKFYGPEGPYGVFAGRDASRGLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKL 170 The following BLAST results are available for this feature:
BLAST of CK933246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933246 ID=CK933246; Name=CK933246; organism=Citrus sinensis; type=EST; length=697bpback to top |