CK933247

Overview
NameCK933247
Unique NameCK933247
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1583 contig Csv1_Contig1583:1..759. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK933247 vs. ExPASy Swiss-Prot
Match: MGN_ORYSJ (Protein mago nashi homolog OS=Oryza sativa subsp. japonica GN=Os12g0287200 PE=2 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 3.487e-77
Identity = 140/152 (92.11%), Postives = 146/152 (96.05%), Query Frame = 3 
Query:   93 AGEE---DGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAVLRECRRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 539
            AGE+    GEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF++P+VLRE RRII ESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQ+SKDPEGLRIFYYLVQDLKCFVFSLI+LHFKIKPI
Sbjct:    7 AGEDVPGGGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQTSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPI 158
[Close]
BLAST of CK933247 vs. ExPASy Swiss-Prot
Match: MGN_EUPLA (Protein mago nashi homolog OS=Euphorbia lagascae PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.325e-76
Identity = 138/146 (94.52%), Postives = 141/146 (96.58%), Query Frame = 3 
Query:  102 EDGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAVLRECRRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 539
            ED EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAVL+ECRRII+ESEIMKEDD NWP PDRVGRQELEIVMGNE+ISFTTSKIGSLVDVQ SKDPEGLRIFYYLV DLKCFVFSLISLHFKIKPI
Sbjct:    4 EDNEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAVLKECRRIIAESEIMKEDDANWPGPDRVGRQELEIVMGNEYISFTTSKIGSLVDVQRSKDPEGLRIFYYLVHDLKCFVFSLISLHFKIKPI 149
[Close]
BLAST of CK933247 vs. ExPASy Swiss-Prot
Match: MGN_ARATH (Protein mago nashi homolog OS=Arabidopsis thaliana GN=At1g02140 PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.122e-75
Identity = 135/150 (90.00%), Postives = 142/150 (94.67%), Query Frame = 3 
Query:   90 MAGEEDGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAVLRECRRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 539
            MA EE  EFYLRYYVGHKGKFGHEFLEFEFR DGKLRYANNSNYKNDT+IRKEVFLTPAVL+EC+RI+SESEI+KEDDNNWPEPDRVG+QELEIV+GNEHISF TSKIGSLVD QSS DPEGLRIFYYLVQDLKC VFSLISLHFKIKPI
Sbjct:    1 MAAEEATEFYLRYYVGHKGKFGHEFLEFEFREDGKLRYANNSNYKNDTIIRKEVFLTPAVLKECKRIVSESEILKEDDNNWPEPDRVGKQELEIVLGNEHISFATSKIGSLVDCQSSNDPEGLRIFYYLVQDLKCLVFSLISLHFKIKPI 150
[Close]
BLAST of CK933247 vs. ExPASy Swiss-Prot
Match: MGN_RAT (Protein mago nashi homolog OS=Rattus norvegicus GN=Magoh PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.052e-65
Identity = 117/145 (80.69%), Postives = 129/145 (88.97%), Query Frame = 3 
Query:  105 DGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAVLRECRRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 539
            + +FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKND MIRKE ++  +V+ E +RII +SEI KEDD  WP PDRVGRQELEIV+G+EHISFTTSKIGSL+DV  SKDPEGLR+FYYLVQDLKC VFSLI LHFKIKPI
Sbjct:    2 ESDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI 146
[Close]
BLAST of CK933247 vs. ExPASy Swiss-Prot
Match: MGN_MOUSE (Protein mago nashi homolog OS=Mus musculus GN=Magoh PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.052e-65
Identity = 117/145 (80.69%), Postives = 129/145 (88.97%), Query Frame = 3 
Query:  105 DGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAVLRECRRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 539
            + +FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKND MIRKE ++  +V+ E +RII +SEI KEDD  WP PDRVGRQELEIV+G+EHISFTTSKIGSL+DV  SKDPEGLR+FYYLVQDLKC VFSLI LHFKIKPI
Sbjct:    2 ESDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI 146
[Close]
BLAST of CK933247 vs. ExPASy Swiss-Prot
Match: MGN_HUMAN (Protein mago nashi homolog OS=Homo sapiens GN=MAGOH PE=1 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.052e-65
Identity = 117/145 (80.69%), Postives = 129/145 (88.97%), Query Frame = 3 
Query:  105 DGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAVLRECRRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 539
            + +FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKND MIRKE ++  +V+ E +RII +SEI KEDD  WP PDRVGRQELEIV+G+EHISFTTSKIGSL+DV  SKDPEGLR+FYYLVQDLKC VFSLI LHFKIKPI
Sbjct:    2 ESDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI 146
[Close]
BLAST of CK933247 vs. ExPASy Swiss-Prot
Match: MGN_BOVIN (Protein mago nashi homolog OS=Bos taurus GN=MAGOH PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 1.052e-65
Identity = 117/145 (80.69%), Postives = 129/145 (88.97%), Query Frame = 3 
Query:  105 DGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAVLRECRRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 539
            + +FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKND MIRKE ++  +V+ E +RII +SEI KEDD  WP PDRVGRQELEIV+G+EHISFTTSKIGSL+DV  SKDPEGLR+FYYLVQDLKC VFSLI LHFKIKPI
Sbjct:    2 ESDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI 146
[Close]
BLAST of CK933247 vs. ExPASy Swiss-Prot
Match: MGN_SALSA (Protein mago nashi homolog OS=Salmo salar GN=magoh PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.795e-65
Identity = 117/143 (81.82%), Postives = 128/143 (89.51%), Query Frame = 3 
Query:  111 EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAVLRECRRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 539
            +FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKND MIRKE ++  +V+ E +RII +SEI KEDD  WP PDRVGRQELEIV+G+EHISFTTSKIGSL+DV  SKDPEGLR+FYYLVQDLKC VFSLI LHFKIKPI
Sbjct:    5 DFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI 147
[Close]
BLAST of CK933247 vs. ExPASy Swiss-Prot
Match: MGN_DANRE (Protein mago nashi homolog OS=Danio rerio GN=magoh PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.795e-65
Identity = 117/143 (81.82%), Postives = 128/143 (89.51%), Query Frame = 3 
Query:  111 EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAVLRECRRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 539
            +FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKND MIRKE ++  +V+ E +RII +SEI KEDD  WP PDRVGRQELEIV+G+EHISFTTSKIGSL+DV  SKDPEGLR+FYYLVQDLKC VFSLI LHFKIKPI
Sbjct:    5 DFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI 147
[Close]
BLAST of CK933247 vs. ExPASy Swiss-Prot
Match: MGN_CHICK (Protein mago nashi homolog OS=Gallus gallus GN=MAGOH PE=2 SV=2)

HSP 1 Score: 249.21 bits (635), Expect = 1.795e-65
Identity = 117/143 (81.82%), Postives = 128/143 (89.51%), Query Frame = 3 
Query:  111 EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAVLRECRRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLISLHFKIKPI 539
            +FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKND MIRKE ++  +V+ E +RII +SEI KEDD  WP PDRVGRQELEIV+G+EHISFTTSKIGSL+DV  SKDPEGLR+FYYLVQDLKC VFSLI LHFKIKPI
Sbjct:    4 DFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI 146
The following BLAST results are available for this feature:
BLAST of CK933247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
MGN_ORYSJ3.487e-7792.11Protein mago nashi homolog OS=Oryza sativa subsp. ... [more]
MGN_EUPLA1.325e-7694.52Protein mago nashi homolog OS=Euphorbia lagascae P... [more]
MGN_ARATH1.122e-7590.00Protein mago nashi homolog OS=Arabidopsis thaliana... [more]
MGN_RAT1.052e-6580.69Protein mago nashi homolog OS=Rattus norvegicus GN... [more]
MGN_MOUSE1.052e-6580.69Protein mago nashi homolog OS=Mus musculus GN=Mago... [more]
MGN_HUMAN1.052e-6580.69Protein mago nashi homolog OS=Homo sapiens GN=MAGO... [more]
MGN_BOVIN1.052e-6580.69Protein mago nashi homolog OS=Bos taurus GN=MAGOH ... [more]
MGN_SALSA1.795e-6581.82Protein mago nashi homolog OS=Salmo salar GN=magoh... [more]
MGN_DANRE1.795e-6581.82Protein mago nashi homolog OS=Danio rerio GN=magoh... [more]
MGN_CHICK1.795e-6581.82Protein mago nashi homolog OS=Gallus gallus GN=MAG... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004287_H06 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933247 ID=CK933247; Name=CK933247; organism=Citrus sinensis; type=EST; length=759bp
GGGGGTCATAAACATCCATTTACTAGGGCTAGGAGGGCATTGGATNNNNN
NTGTCCTCTCCCCTCTGATTGAAAGTCGAAACAGAAACAATGGCCGGAGA
AGAAGATGGAGAGTTTTATCTTCGTTACTACGTAGGGCACAAGGGCAAAT
TCGGTCACGAGTTCTTGGAGTTCGAGTTTCGGCCAGATGGCAAGCTCCGA
TACGCTAATAATTCCAACTACAAAAACGATACTATGATTCGCAAAGAGGT
CTTCCTCACCCCCGCCGTCCTCCGCGAATGCCGCCGCATCATTTCCGAGA
GCGAGATCATGAAGGAAGATGATAACAACTGGCCGGAGCCTGACCGTGTT
GGACGGCAGGAGCTGGAGATTGTAATGGGAAATGAACATATCTCCTTCAC
TACTTCAAAAATTGGATCACTTGTTGACGTCCAGAGTAGTAAGGATCCGG
AAGGCCTTCGTATATTCTATTATCTTGTTCAGGACTTGAAGTGCTTTGTG
TTCTCTCTCATCTCACTTCATTTCAAGATCAAACCTATATAAACAGCAAC
ATGGTTTCTGCCTTACAATATCTGTTCGGGGGTCTTGCTTTTGTGTTTGT
AACAGCTGCTTCATTAGTATGTGGACTCTGTAGTTTTACAACTTTTTGCC
TTTGTTATTATCTGGGTTTGTGTGTGGCTTATGTAAGGATCTGTGGATTT
GGAGCTGAGTAGAATGTTCCTGTCTGTTATGGCTGGCTTCGGGCTCAAAA
AAAAAAAAA
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