CK933259

Overview
NameCK933259
Unique NameCK933259
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length831
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1552 contig Csv1_Contig1552:1..831. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CK933259 vs. ExPASy Swiss-Prot
Match: LEA14_SOYBN (Desiccation protectant protein Lea14 homolog OS=Glycine max PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 6.588e-11
Identity = 36/137 (26.28%), Postives = 66/137 (48.18%), Query Frame = 3 
Query:  225 EETIGFGKPTADVTAVHIPKINLERADIVIDVXXXXXXXXXXXXXXXXXXVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEENGEIPIPYKPDI 635
            E+     KP A VT V   +++ +  + +  V                  ++S G+++ SG IPD G++ A     + +PV + +  + +   DI     I Y++ + L++D+PV G  T+PL + GEI +P   D+
Sbjct:   14 EKVTNMPKPEASVTDVDFKRVSRDSVEYLAKVSVSNPYSTPIPICEIKYSLKSAGKEIASGTIPDPGSLKASDTTMLDVPVKVPHSILLSLAKDIGADWDIDYQLDLGLVIDLPVIGNFTIPLSQKGEIKLPTLSDM 150
The following BLAST results are available for this feature:
BLAST of CK933259 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LEA14_SOYBN6.588e-1126.28Desiccation protectant protein Lea14 homolog OS=Gl... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004287_F08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIF_F08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933259 ID=CK933259; Name=CK933259; organism=Citrus sinensis; type=EST; length=831bp
GGGGGAGTGTAAATAGTGGCCTTGCTCTTCGTGGTTGCTGTCTTGAACTC
ATCAGATCTCTTTCAAAACTTCATCAACTGTCAGGTATGGCATCATCTGA
TAAGCCGGAAGTAGTTGAAAGGGATGTTAAGGAGAAAGGGCACAAGGAGG
ATGACAAAGAAGAGGGAAAAGGTGGATTTATCGAAAAAGTCAAGGATTTT
ATCCATGATATTGGTGAAAAGATTGAGGAAACAATTGGATTTGGGAAGCC
AACTGCTGATGTTACTGCAGTTCACATTCCTAAAATTAATCTTGAAAGGG
CAGATATTGTTATTGACGTGCTCATTAAAAACCCGAATCCTATACCGATC
CCTCTAATTGACATAAACTACTTGGTTGAGAGTGATGGAAGGAAATTGGT
TTCTGGTTTGATCCCAGATTCTGGAACTATTCATGCACATGGCGAGGAGA
CTGTCAAAATCCCTGTTACTCTGATTTATGATGACATTAAAAATGCATAT
GATGATATCAAGCCTGGGATGATTATTCCATATAAGATCAAGGTTGACCT
GATTGTAGATGTGCCGGTTTTTGGAAGGTTGACTCTTCCACTTGAGGAAA
ATGGAGAGATCCCCATTCCTTACAAGCCCGATATTGATCTCGAGAAGATT
AAGTTTGAGAGATTCTCATTTGAAGAAACTGTTGCAATTCTTCATTTGAA
GTTGGAAAATAAGAACGACTTTGACTTGGCCCTGAATTCACTTGATTATG
AAGTTTGGCTATCAGATGCGAGCATTGGAGCTGCTGAACTCACAAAATCT
GCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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