CK933272

Overview
NameCK933272
Unique NameCK933272
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length377
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6967 contig Csv1_Contig6967:65..441. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933272 vs. ExPASy Swiss-Prot
Match: FKB12_VICFA (Peptidyl-prolyl isomerase FKBP12 OS=Vicia faba GN=FKBP12 PE=1 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 5.205e-52
Identity = 91/110 (82.73%), Postives = 100/110 (90.91%), Query Frame = 1
Query:   46 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGI*PNSVLDFEIQVLQ 375
            MG+EKQI+  G GP P  GQ VTVHCTGYGKNGDLSQKFWSTKDPGQ PFTF+IG+GSVIKGWDEGV+GMQ+GEVARLRCSPDYAYGAGGFP WGI PNSVL+FEI+VL+
Sbjct:    1 MGVEKQIIRAGTGPNPSRGQNVTVHCTGYGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVIKGWDEGVLGMQLGEVARLRCSPDYAYGAGGFPAWGIQPNSVLEFEIEVLR 110          
BLAST of CK933272 vs. ExPASy Swiss-Prot
Match: FKB12_ARATH (Peptidyl-prolyl isomerase FKBP12 OS=Arabidopsis thaliana GN=FKBP12 PE=1 SV=2)

HSP 1 Score: 202.601 bits (514), Expect = 5.205e-52
Identity = 90/109 (82.57%), Postives = 101/109 (92.66%), Query Frame = 1
Query:   46 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGI*PNSVLDFEIQVL 372
            MG+EKQ++ PGNGPKP  GQ VTVHCTG+GK+GDLSQKFWSTKD GQ+PF+FQIGKG+VIKGWDEGV+GMQ+GEVARLRCS DYAYGAGGFP WGI PNSVLDFEI+VL
Sbjct:    1 MGVEKQVIRPGNGPKPAPGQTVTVHCTGFGKDGDLSQKFWSTKDEGQKPFSFQIGKGAVIKGWDEGVIGMQIGEVARLRCSSDYAYGAGGFPAWGIQPNSVLDFEIEVL 109          
BLAST of CK933272 vs. ExPASy Swiss-Prot
Match: FKBP_ASPOR (FK506-binding protein 1 OS=Aspergillus oryzae GN=fpr1 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.786e-21
Identity = 52/119 (43.70%), Postives = 74/119 (62.18%), Query Frame = 1
Query:   46 MGIEKQILTPGNGPKPVAGQKVTVHCTGY------GKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYG---AGGFPQWGI*PNSVLDFEIQVLQ 375
            MG+E++I+T G+GP P +G KV++H TG+         G   ++F S++ PG+ P    IG+G VIKGWDEGVM M +GE + L  +PDY YG   AG  P      NS L FE+++L+
Sbjct:    1 MGVERKIITRGSGPSPASGDKVSIHYTGWIYDPKKANKGFQGKQFDSSRSPGRGPLVVNIGQGKVIKGWDEGVMQMSLGEKSTLTITPDYGYGDKAAGKIP-----ANSTLIFEVELLK 114          
BLAST of CK933272 vs. ExPASy Swiss-Prot
Match: FKBP_GIBZE (FK506-binding protein 1 OS=Gibberella zeae GN=FPR1 PE=3 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 8.106e-21
Identity = 52/108 (48.15%), Postives = 67/108 (62.04%), Query Frame = 1
Query:   46 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGI*PNSVLDFEIQV 369
            MG+EK I+T G+GP P  GQKVT+  TG+ +  D ++        G+  F   IG G VIKGWDEGV  M++GE A L  SPDY YG  GFP   I PNS L F++++
Sbjct:    1 MGVEKTIITQGSGPSPQVGQKVTMEYTGWLQKEDGTKGDQFDTSVGRGDFVVNIGVGQVIKGWDEGVTQMKLGEKATLHISPDYGYGPRGFP-GAIPPNSTLIFDVEL 107          
BLAST of CK933272 vs. ExPASy Swiss-Prot
Match: FKB1A_EMENI (FK506-binding protein 1A OS=Emericella nidulans GN=fprA PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.383e-20
Identity = 59/114 (51.75%), Postives = 77/114 (67.54%), Query Frame = 1
Query:   46 MGIEKQILTPGNG---PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKD-PGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGI*PNSVLDFEIQVLQ 375
            MG+E Q ++PG+G   PKP  G  V++H TG   +G    KF S++D PG   F  QIG G VIKGWDEGV+ + VGE A+L C+PDYAYGA GFP   I PN+ L FE+++L+
Sbjct:    1 MGVEVQRISPGDGKNFPKP--GDTVSIHYTGTLADGS---KFDSSRDRPGT--FVTQIGVGRVIKGWDEGVLQLSVGEKAKLICTPDYAYGARGFPP-VIPPNATLTFEVELLK 106          
BLAST of CK933272 vs. ExPASy Swiss-Prot
Match: FKB12_DROME (12 kDa FK506-binding protein OS=Drosophila melanogaster GN=FK506-bp2 PE=1 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 1.806e-20
Identity = 56/111 (50.45%), Postives = 74/111 (66.67%), Query Frame = 1
Query:   46 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGI*PNSVLDFEIQVLQ 375
            MG++   + PG+G   P  GQKVTVH TG   +G    KF S++D  + PF F IGKG VI+GWDEGV  + VG+ A+L CSPDYAYG+ G P   I PNS L F++++L+
Sbjct:    1 MGVQVVPIAPGDGSTYPKNGQKVTVHYTGTLDDGT---KFDSSRDRNK-PFKFTIGKGEVIRGWDEGVAQLSVGQRAKLICSPDYAYGSRGHP-GVIPPNSTLTFDVELLK 106          
BLAST of CK933272 vs. ExPASy Swiss-Prot
Match: FKBP_SCHPO (FK506-binding protein OS=Schizosaccharomyces pombe GN=SPBC839.17c PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.170e-19
Identity = 55/112 (49.11%), Postives = 73/112 (65.18%), Query Frame = 1
Query:   46 MGIEKQILTPGNG---PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGI*PNSVLDFEIQVL 372
            MG+EKQ+++ GNG   PKP  G ++T+H TG   NG   +KF S+ D G  PF   IG G +I+GWDEGV  M +GE A+L  +PDY YG  GFP   I PNS L F++++L
Sbjct:    1 MGVEKQVISSGNGQDFPKP--GDRITMHYTGTLTNG---KKFDSSVDRGS-PFVCTIGVGQLIRGWDEGVPKMSLGEKAKLTITPDYGYGPRGFPGL-IPPNSTLLFDVELL 105          
BLAST of CK933272 vs. ExPASy Swiss-Prot
Match: FKBP1_RHIOR (FK506-binding protein 1 OS=Rhizopus oryzae GN=FKBP1 PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.587e-19
Identity = 49/111 (44.14%), Postives = 70/111 (63.06%), Query Frame = 1
Query:   46 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGI*PNSVLDFEIQVLQ 375
            MG+  + + PG+G   P  G  VT+H TG  +NG +    + +     +PF  QIG G VIKGWDEGV+ + +G+ A L C+PDYAYG  GFP   I PN+ L+FE+++L+
Sbjct:    1 MGVTVETIQPGDGKNFPKKGDTVTMHYTGTLQNGSV----FDSSVRRNEPFVTQIGVGRVIKGWDEGVLQLSLGQKANLICTPDYAYGPRGFPP-VIPPNATLNFEVELLK 106          
BLAST of CK933272 vs. ExPASy Swiss-Prot
Match: FKBP_CRYNV (FK506-binding protein 1 OS=Cryptococcus neoformans var. grubii GN=FRR1 PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.690e-18
Identity = 52/111 (46.85%), Postives = 71/111 (63.96%), Query Frame = 1
Query:   46 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGI*PNSVLDFEIQVLQ 375
            MG+  + ++ G+G   P  G  VT+H  G   +G    KF S++D G  PF  +IG+G VI+GWDEGV  + VG+ A L C+PDYAYGA GFP   I PNS L FE+++L+
Sbjct:    1 MGVTVENISAGDGKTFPQPGDNVTIHYVGTLLDGS---KFDSSRDRGT-PFVCRIGQGQVIRGWDEGVPQLSVGQKANLICTPDYAYGARGFPP-VIPPNSTLKFEVELLK 106          
BLAST of CK933272 vs. ExPASy Swiss-Prot
Match: FKBP_CRYNE (FK506-binding protein 1 OS=Cryptococcus neoformans GN=FPR1 PE=3 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.207e-18
Identity = 51/111 (45.95%), Postives = 71/111 (63.96%), Query Frame = 1
Query:   46 MGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGI*PNSVLDFEIQVLQ 375
            MG+  + ++ G+G   P  G  VT+H  G   +G    KF S++D G  PF  +IG+G VI+GWDEGV  + +G+ A L C+PDYAYGA GFP   I PNS L FE+++L+
Sbjct:    1 MGVTVENISAGDGKTFPQPGDSVTIHYVGTLLDGS---KFDSSRDRGT-PFVCRIGQGQVIRGWDEGVPQLSIGQKANLICTPDYAYGARGFPP-VIPPNSTLKFEVELLK 106          
The following BLAST results are available for this feature:
BLAST of CK933272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
FKB12_VICFA5.205e-5282.73Peptidyl-prolyl isomerase FKBP12 OS=Vicia faba GN=... [more]
FKB12_ARATH5.205e-5282.57Peptidyl-prolyl isomerase FKBP12 OS=Arabidopsis th... [more]
FKBP_ASPOR2.786e-2143.70FK506-binding protein 1 OS=Aspergillus oryzae GN=f... [more]
FKBP_GIBZE8.106e-2148.15FK506-binding protein 1 OS=Gibberella zeae GN=FPR1... [more]
FKB1A_EMENI1.383e-2051.75FK506-binding protein 1A OS=Emericella nidulans GN... [more]
FKB12_DROME1.806e-2050.4512 kDa FK506-binding protein OS=Drosophila melanog... [more]
FKBP_SCHPO1.170e-1949.11FK506-binding protein OS=Schizosaccharomyces pombe... [more]
FKBP1_RHIOR7.587e-1944.14FK506-binding protein 1 OS=Rhizopus oryzae GN=FKBP... [more]
FKBP_CRYNV1.690e-1846.85FK506-binding protein 1 OS=Cryptococcus neoformans... [more]
FKBP_CRYNE2.207e-1845.95FK506-binding protein 1 OS=Cryptococcus neoformans... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004287_F04 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIF_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933272 ID=CK933272; Name=CK933272; organism=Citrus sinensis; type=EST; length=377bp
GGGGACAGTTACCAGAAAGTCAAAAACCCTAAGACAGAGAAGGAGATGGG
AATAGAGAAGCAAATTTTGACCCCAGGAAACGGTCCTAAGCCGGTTGCTG
GTCAGAAGGTTACCGTCCACTGCACTGGCTACGGGAAAAATGGCGATCTG
TCTCAGAAGTTCTGGAGCACAAAGGACCCTGGGCAGCAGCCTTTTACATT
CCAGATTGGCAAAGGCTCTGTTATAAAAGGATGGGATGAAGGTGTGATGG
GAATGCAGGTGGGAGAAGTTGCTCGTCTGCGGTGCTCCCCAGATTACGCC
TATGGTGCTGGTGGATTTCCACAATGGGGGATTTAACCTAACTCAGTCCT
GGATTTTGAGATACAAGTCCTGCAGGT
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