CK933298

Overview
NameCK933298
Unique NameCK933298
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length886
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933298 vs. ExPASy Swiss-Prot
Match: SF3_HELAN (Pollen-specific protein SF3 OS=Helianthus annuus GN=SF3 PE=2 SV=1)

HSP 1 Score: 276.174 bits (705), Expect = 1.763e-73
Identity = 127/182 (69.78%), Postives = 148/182 (81.32%), Query Frame = 2
Query:  188 QKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEESFEGTPKIVKPEKLV--ENENAQKASNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKGNYSQLESDLEKSQISEKPT 727
            QKC  C+KTVYLVDKL A+ RVYHKACFRCHHC  TLKLSNFNSF+GV+YCR HFDQLFKRTGSLE+SF+GTPK  KPE+    E ++A + S+ F GTRDKC  C + VYP E+V V+G AYHR+CFKC HGGCTISPSNYIAHEG+LYCKHHHIQLF++KGNYSQLE +   +  +E  T
Sbjct:    9 QKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHHFDQLFKRTGSLEKSFDGTPKF-KPERTFSQETQSANRLSSFFEGTRDKCNACAKIVYPIERVKVDGTAYHRACFKCCHGGCTISPSNYIAHEGRLYCKHHHIQLFKKKGNYSQLEVEETVAAPAESET 189          

HSP 2 Score: 75.0998 bits (183), Expect = 5.967e-13
Identity = 29/69 (42.03%), Postives = 44/69 (63.77%), Query Frame = 2
Query:  467 FVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKGN 673
            F GT  KC  C++TVY  +K+  N   YH++CF+C H   T+  SN+ + +G +YC+HH  QLF+  G+
Sbjct:    4 FTGTTQKCTVCEKTVYLVDKLVANQRVYHKACFRCHHCNSTLKLSNFNSFDGVVYCRHHFDQLFKRTGS 72          
BLAST of CK933298 vs. ExPASy Swiss-Prot
Match: CSRP3_RAT (Cysteine and glycine-rich protein 3 OS=Rattus norvegicus GN=Csrp3 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.596e-20
Identity = 57/190 (30.00%), Postives = 90/190 (47.37%), Query Frame = 2
Query:  191 KCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTG----------------SLEESFEGTPKIVKPEKLVENENAQKASNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKG-NYSQLESDLEKSQ 709
            KC ACDKTVY  +++  + R +HK CF C  C+  L  +   + E  +YC+  + + +   G                 L   F+ +PK   P +     N  K S KF G  +KC  C ++VY  EKV   G  +H++CF C+  G ++  +N    +G+LYCK  + + F   G  +  L   +EK +
Sbjct:    9 KCGACDKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRKYGPKGIGFGQGAGCLSTDTGEHLGLQFQQSPK---PARAATTSNPSKFSAKF-GESEKCPRCGKSVYAAEKVMGGGKPWHKTCFPCAICGKSLESTNVTDKDGELYCKVCYAKNFGPTGIGFGGLTHQVEKKE 194          
BLAST of CK933298 vs. ExPASy Swiss-Prot
Match: CSRP3_MOUSE (Cysteine and glycine-rich protein 3 OS=Mus musculus GN=Csrp3 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.596e-20
Identity = 56/190 (29.47%), Postives = 91/190 (47.89%), Query Frame = 2
Query:  191 KCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTG----------------SLEESFEGTPKIVKPEKLVENENAQKASNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKG-NYSQLESDLEKSQ 709
            KC AC+KTVY  +++  + R +HK CF C  C+  L  +   + E  +YC+  + + +   G                 L   F+ +PK   P +     N  K S KF G  +KC  C ++VY  EKV   G  +H++CF+C+  G ++  +N    +G+LYCK  + + F   G  +  L   +EK +
Sbjct:    9 KCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPKGIGFGQGAGCLSTDTGEHLGLQFQQSPK---PARAATTSNPSKFSAKF-GESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCKVCYAKNFGPTGIGFGGLTQQVEKKE 194          
BLAST of CK933298 vs. ExPASy Swiss-Prot
Match: CSRP3_HUMAN (Cysteine and glycine-rich protein 3 OS=Homo sapiens GN=CSRP3 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.596e-20
Identity = 56/190 (29.47%), Postives = 92/190 (48.42%), Query Frame = 2
Query:  191 KCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTG----------------SLEESFEGTPKIVKPEKLVENENAQKASNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKG-NYSQLESDLEKSQ 709
            KC AC+KTVY  +++  + R +HK CF C  C+  L  +   + E  +YC+  + + +   G                 L   F+ +PK   P + V   N  K + KF G  +KC  C ++VY  EKV   G  +H++CF+C+  G ++  +N    +G+LYCK  + + F   G  +  L   +EK +
Sbjct:    9 KCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCYGRRYGPKGIGYGQGAGCLSTDTGEHLGLQFQQSPK---PARSVTTSNPSKFTAKF-GESEKCPRCGKSVYAAEKVMGGGKPWHKTCFRCAICGKSLESTNVTDKDGELYCKVCYAKNFGPTGIGFGGLTQQVEKKE 194          
BLAST of CK933298 vs. ExPASy Swiss-Prot
Match: CSRP2_HUMAN (Cysteine and glycine-rich protein 2 OS=Homo sapiens GN=CSRP2 PE=1 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 3.611e-18
Identity = 49/172 (28.49%), Postives = 83/172 (48.26%), Query Frame = 2
Query:  191 KCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEESFEGT------------PKIVKPEKLVENENAQKASNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKG 670
            KC AC +TVY  +++  D R +H+ CF C  C+  L  +     +  +YC+  + + +   G       GT            P+ V+P +   N N  K + K+ G  +KC  C  +VY  EK+   G  +H++CF+C+  G ++  +     EG++YCK  + + F  KG
Sbjct:    9 KCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESVQPHRPTTNPNTSKFAQKYGGA-EKCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFGPKG 179          
BLAST of CK933298 vs. ExPASy Swiss-Prot
Match: CSRP2_BOVIN (Cysteine and glycine-rich protein 2 OS=Bos taurus GN=CSRP2 PE=2 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 3.611e-18
Identity = 49/172 (28.49%), Postives = 83/172 (48.26%), Query Frame = 2
Query:  191 KCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEESFEGT------------PKIVKPEKLVENENAQKASNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKG 670
            KC AC +TVY  +++  D R +H+ CF C  C+  L  +     +  +YC+  + + +   G       GT            P+ V+P +   N N  K + K+ G  +KC  C  +VY  EK+   G  +H++CF+C+  G ++  +     EG++YCK  + + F  KG
Sbjct:    9 KCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESVQPHRPTTNPNTSKFAQKYGGA-EKCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFGPKG 179          
BLAST of CK933298 vs. ExPASy Swiss-Prot
Match: CSRP2_RAT (Cysteine and glycine-rich protein 2 OS=Rattus norvegicus GN=Csrp2 PE=2 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 6.160e-18
Identity = 48/172 (27.91%), Postives = 82/172 (47.67%), Query Frame = 2
Query:  191 KCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEESFEGT------------PKIVKPEKLVENENAQKASNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKG 670
            KC AC +TVY  +++  D R +H+ CF C  C+  L  +     +  +YC+  + + +   G       GT            P+  +P +   N N  K + K+ G  +KC  C  +VY  EK+   G  +H++CF+C+  G ++  +     EG++YCK  + + F  KG
Sbjct:    9 KCGACGRTVYHAEEVQCDGRTFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESAQPHRPTTNPNTSKFAQKYGGA-EKCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFGPKG 179          
BLAST of CK933298 vs. ExPASy Swiss-Prot
Match: CSRP2_MOUSE (Cysteine and glycine-rich protein 2 OS=Mus musculus GN=Csrp2 PE=2 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 1.051e-17
Identity = 48/172 (27.91%), Postives = 82/172 (47.67%), Query Frame = 2
Query:  191 KCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEESFEGT------------PKIVKPEKLVENENAQKASNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKG 670
            KC AC +TVY  +++  D R +H+ CF C  C+  L  +     +  +YC+  + + +   G       GT            P+  +P +   N N  K + K+ G  +KC  C  +VY  EK+   G  +H++CF+C+  G ++  +     EG++YCK  + + F  KG
Sbjct:    9 KCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDEEIYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESAQPHRPTTNPNTSKFAQKYGGA-EKCSRCGDSVYAAEKIIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFGPKG 179          
BLAST of CK933298 vs. ExPASy Swiss-Prot
Match: CSRP2_COTJA (Cysteine and glycine-rich protein 2 OS=Coturnix coturnix japonica GN=CSRP2 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 2.341e-17
Identity = 50/173 (28.90%), Postives = 82/173 (47.40%), Query Frame = 2
Query:  191 KCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEESFEGTPKIVKPEKL-------------VENENAQKASNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKG 670
            KC AC +TVY  +++  D R +H+ CF C  C+  L  +     +  +YC+  + + +   G       GT  + + E+L               N N  K + KF G  +KC  C  +VY  EKV   G  +H++CF+C+  G ++  +     EG++YCK  + + F  KG
Sbjct:    9 KCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDAEVYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESSPSPHRPTTNPNTSKFAQKFGGA-EKCSRCGDSVYAAEKVIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFGPKG 180          
BLAST of CK933298 vs. ExPASy Swiss-Prot
Match: CSRP2_CHICK (Cysteine and glycine-rich protein 2 OS=Gallus gallus GN=CSRP2 PE=2 SV=3)

HSP 1 Score: 89.7373 bits (221), Expect = 2.341e-17
Identity = 50/173 (28.90%), Postives = 82/173 (47.40%), Query Frame = 2
Query:  191 KCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNFNSFEGVLYCRPHFDQLFKRTGSLEESFEGTPKIVKPEKL-------------VENENAQKASNKFVGTRDKCVGCDRTVYPTEKVSVNGAAYHRSCFKCSHGGCTISPSNYIAHEGKLYCKHHHIQLFREKG 670
            KC AC +TVY  +++  D R +H+ CF C  C+  L  +     +  +YC+  + + +   G       GT  + + E+L               N N  K + KF G  +KC  C  +VY  EKV   G  +H++CF+C+  G ++  +     EG++YCK  + + F  KG
Sbjct:    9 KCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIHDAEVYCKSCYGKKYGPKGYGYGQGAGTLNMDRGERLGIKPESTPSPHRPTTNPNTSKFAQKFGGA-EKCSRCGDSVYAAEKVIGAGKPWHKNCFRCAKCGKSLESTTLTEKEGEIYCKGCYAKNFGPKG 180          
The following BLAST results are available for this feature:
BLAST of CK933298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
SF3_HELAN1.763e-7369.78Pollen-specific protein SF3 OS=Helianthus annuus G... [more]
CSRP3_RAT8.596e-2030.00Cysteine and glycine-rich protein 3 OS=Rattus norv... [more]
CSRP3_MOUSE8.596e-2029.47Cysteine and glycine-rich protein 3 OS=Mus musculu... [more]
CSRP3_HUMAN8.596e-2029.47Cysteine and glycine-rich protein 3 OS=Homo sapien... [more]
CSRP2_HUMAN3.611e-1828.49Cysteine and glycine-rich protein 2 OS=Homo sapien... [more]
CSRP2_BOVIN3.611e-1828.49Cysteine and glycine-rich protein 2 OS=Bos taurus ... [more]
CSRP2_RAT6.160e-1827.91Cysteine and glycine-rich protein 2 OS=Rattus norv... [more]
CSRP2_MOUSE1.051e-1727.91Cysteine and glycine-rich protein 2 OS=Mus musculu... [more]
CSRP2_COTJA2.341e-1728.90Cysteine and glycine-rich protein 2 OS=Coturnix co... [more]
CSRP2_CHICK2.341e-1728.90Cysteine and glycine-rich protein 2 OS=Gallus gall... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004287_C09 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933298 ID=CK933298; Name=CK933298; organism=Citrus sinensis; type=EST; length=886bp
GGGGACTGTAATTCCACTGGTTTTTTTCCCTCACATTTTGGTTTCTTTTT
TTCTCCTCATTATCATCAATAAAACACAAAAAAAAGAAGAAGTTGCTTCT
CTTAATATAATAAATCTGAGGTTCGGTTGGACCGGAAGCTAGCTAGCTAG
CAAGCAGCAGCCATGGCATCACCCTTTGGAGGAACCCCAAAAATGCATGG
CCTGTGACAAAACTGTGTACCTTGTTGATAAGTTGACGGCCGATAATCGG
GTCTATCACAAAGCTTGCTTCCGGTGCCACCATTGCAAAGGAACCCTCAA
GCTCAGCAACTTCAATTCCTTTGAGGGGGTCCTGTATTGCAGGCCTCACT
TTGATCAGCTCTTCAAGAGAACTGGCAGCCTGGAGGAGAGTTTTGAAGGA
ACACCAAAGATTGTGAAACCTGAAAAGCTCGTTGAAAATGAGAATGCACA
GAAAGCCTCCAACAAGTTTGTGGGCACCAGAGATAAATGTGTGGGATGCG
ATAGGACTGTTTATCCAACTGAGAAGGTTTCTGTAAATGGCGCCGCATAT
CATAGGAGCTGCTTCAAGTGCAGCCATGGAGGTTGCACCATCAGCCCATC
AAATTATATTGCCCATGAGGGGAAACTCTACTGCAAGCATCATCACATAC
AACTCTTCAGGGAGAAAGGAAACTACAGCCAGCTTGAGAGTGATCTTGAG
AAGAGTCAAATCTCTGAGAAGCCAACTCCTGTCCAAATTGCTGCCGAATC
ATAACTTCAAGTGGATTTTTTTATTATTATTATTTGTAGTATTTTGTGCG
TAAATCGTACTCATTTCTGAACTTTGTTGTTGGTGTTTGATCCAATTACG
ATTTGTGGCACTGATGTATTTCCTTTGAGGTTTGAG
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