CK933313
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933313 vs. ExPASy Swiss-Prot
Match: RS103_ARATH (40S ribosomal protein S10-3 OS=Arabidopsis thaliana GN=RPS10C PE=2 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 3.684e-43 Identity = 82/97 (84.54%), Postives = 89/97 (91.75%), Query Frame = 1 Query: 100 MIIPEKNRREISKYLFQEGACYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYCWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKP 390 MII E NR+EI KYLF+EG C+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHY W+LTNEGIEFLR YLNLPS++VPATLKK AKP Sbjct: 1 MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP 97
BLAST of CK933313 vs. ExPASy Swiss-Prot
Match: RS101_ARATH (40S ribosomal protein S10-1 OS=Arabidopsis thaliana GN=RPS10A PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 4.811e-43 Identity = 82/97 (84.54%), Postives = 88/97 (90.72%), Query Frame = 1 Query: 100 MIIPEKNRREISKYLFQEGACYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYCWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKP 390 MII E NRREI KYLF+EG C+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFAWMHY W+LTNEGIEFLR YLNLPS++VPATLKK AKP Sbjct: 1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP 97
BLAST of CK933313 vs. ExPASy Swiss-Prot
Match: RS10_ORYSJ (40S ribosomal protein S10 OS=Oryza sativa subsp. japonica GN=RPS10 PE=2 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 6.284e-43 Identity = 82/97 (84.54%), Postives = 88/97 (90.72%), Query Frame = 1 Query: 100 MIIPEKNRREISKYLFQEGACYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYCWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKP 390 MIIP+KNR EI KYLFQEG YAKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETF+W +Y WYLTN+GIE LR YLNLPSEIVPATLKK A+P Sbjct: 1 MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFSWQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARP 97
BLAST of CK933313 vs. ExPASy Swiss-Prot
Match: RS102_ARATH (40S ribosomal protein S10-2 OS=Arabidopsis thaliana GN=RPS10B PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.812e-40 Identity = 81/98 (82.65%), Postives = 88/98 (89.80%), Query Frame = 1 Query: 100 MIIPEKNRREISKYLFQEGACYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYCWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKP 390 MII E NRREISKYLF+EG +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETFAWMHY W+LTNEGI+FLR YLNLPSEIVPATLKKQ KP Sbjct: 1 MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKP 98
BLAST of CK933313 vs. ExPASy Swiss-Prot
Match: RS10_SPOFR (40S ribosomal protein S10 OS=Spodoptera frugiperda GN=RpS10 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.164e-29 Identity = 59/97 (60.82%), Postives = 78/97 (80.41%), Query Frame = 1 Query: 100 MIIPEKNRREISKYLFQEGACYAKKDYNLAKHPEID-VPNLQVIKLMQSFKSKEYVRETFAWMHYCWYLTNEGIEFLRGYLNLPSEIVPATLKKQAK 387 M++P++NR I +YLF+EG AKKDY+ KHP+++ +PNLQVIK MQS KS+ YV+E FAW H+ WYLTNEGIE+LR +L+LP EIVPATLK+ + Sbjct: 1 MLMPKQNRVAIYEYLFKEGVMVAKKDYHAPKHPDLEKIPNLQVIKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIEYLRIFLHLPPEIVPATLKRSVR 97
BLAST of CK933313 vs. ExPASy Swiss-Prot
Match: RS10_LUMRU (40S ribosomal protein S10 OS=Lumbricus rubellus GN=RPS10 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.164e-29 Identity = 59/97 (60.82%), Postives = 75/97 (77.32%), Query Frame = 1 Query: 100 MIIPEKNRREISKYLFQEGACYAKKDYNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYCWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKP 390 M++ +KNR I +YLF+EG AKKD++L KH EIDVPNL VI+ MQS S+ YV+E F W HY WYL NEGI++LR +L+LP EIVPATLK+Q +P Sbjct: 1 MLMSKKNRVMIYEYLFKEGVLVAKKDFHLPKHGEIDVPNLHVIRAMQSLVSRGYVKEQFCWRHYYWYLQNEGIQYLRDFLHLPPEIVPATLKRQTRP 97
BLAST of CK933313 vs. ExPASy Swiss-Prot
Match: RS10_ICTPU (40S ribosomal protein S10 OS=Ictalurus punctatus GN=rps10 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.962e-28 Identity = 60/100 (60.00%), Postives = 78/100 (78.00%), Query Frame = 1 Query: 100 MIIPEKNRREISKYLFQEGACYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYCWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKP 390 M++P+KNR I + LF+EG AKKD +LAKHPE+ +VPNL V+K MQS KS YV+E FAW H+ WYLTNEGI++LR +L+LP EIVPATL++Q +P Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHLAKHPELADKNVPNLHVMKAMQSLKSCGYVKEQFAWRHFYWYLTNEGIQYLRDFLHLPPEIVPATLRRQTRP 100
BLAST of CK933313 vs. ExPASy Swiss-Prot
Match: RS10_RAT (40S ribosomal protein S10 OS=Rattus norvegicus GN=Rps10 PE=2 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.834e-27 Identity = 58/101 (57.43%), Postives = 76/101 (75.25%), Query Frame = 1 Query: 100 MIIPEKNRREISKYLFQEGACYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYCWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKPT 393 M++P+KNR I + LF+EG AKKD ++ KHPE+ +VPNL V+K MQS KS+ YV+E FAW H+ WYLTNEGI++LR YL+LP EIVPATL++ T Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET 101
BLAST of CK933313 vs. ExPASy Swiss-Prot
Match: RS10_MOUSE (40S ribosomal protein S10 OS=Mus musculus GN=Rps10 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.834e-27 Identity = 58/101 (57.43%), Postives = 76/101 (75.25%), Query Frame = 1 Query: 100 MIIPEKNRREISKYLFQEGACYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYCWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKPT 393 M++P+KNR I + LF+EG AKKD ++ KHPE+ +VPNL V+K MQS KS+ YV+E FAW H+ WYLTNEGI++LR YL+LP EIVPATL++ T Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET 101
BLAST of CK933313 vs. ExPASy Swiss-Prot
Match: RS10_HUMAN (40S ribosomal protein S10 OS=Homo sapiens GN=RPS10 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.834e-27 Identity = 58/101 (57.43%), Postives = 76/101 (75.25%), Query Frame = 1 Query: 100 MIIPEKNRREISKYLFQEGACYAKKDYNLAKHPEI---DVPNLQVIKLMQSFKSKEYVRETFAWMHYCWYLTNEGIEFLRGYLNLPSEIVPATLKKQAKPT 393 M++P+KNR I + LF+EG AKKD ++ KHPE+ +VPNL V+K MQS KS+ YV+E FAW H+ WYLTNEGI++LR YL+LP EIVPATL++ T Sbjct: 1 MLMPKKNRIAIYELLFKEGVMVAKKDVHMPKHPELADKNVPNLHVMKAMQSLKSRGYVKEQFAWRHFYWYLTNEGIQYLRDYLHLPPEIVPATLRRSRPET 101 The following BLAST results are available for this feature:
BLAST of CK933313 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933313 ID=CK933313; Name=CK933313; organism=Citrus sinensis; type=EST; length=811bpback to top |