CK933338

Overview
NameCK933338
Unique NameCK933338
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933338 vs. ExPASy Swiss-Prot
Match: SAMC_DANRE (S-adenosylmethionine mitochondrial carrier protein OS=Danio rerio GN=slc25a26 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.120e-24
Identity = 61/142 (42.96%), Postives = 84/142 (59.15%), Query Frame = 2
Query:  446 LYPIDTIKTRLQAVRGGGKIN-FKGLYSGLAGNLAGVLPASALFVGVYEPTKQKLLQIFPENLSAAAHLTAGAIGGFAASLVRVPTEVVKQRLQTGQYASAPDAVRLIASKEGFKGLYAGYGSFLLRDLPFDXIQFCIYEQL 868
            L+P+DTIKTRLQ+ +G  K   F+G+Y+G+     G  P +A F   YE TK         NL+   H+ A ++G   A L+RVPTEVVKQR Q     S    +     +EGF+GLY GYGS +LR++PF  +QF ++E L
Sbjct:   24 LFPLDTIKTRLQSQQGFYKAGGFRGIYAGVPSAAIGSFPNAAAFFVTYESTKSVFSGYTTTNLAPITHMLAASLGEIVACLIRVPTEVVKQRTQANPSISTYRVLLNSLQEEGFRGLYRGYGSTVLREIPFSLVQFPLWEYL 165          
BLAST of CK933338 vs. ExPASy Swiss-Prot
Match: SAMC_XENTR (S-adenosylmethionine mitochondrial carrier protein OS=Xenopus tropicalis GN=slc25a26 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.706e-23
Identity = 59/142 (41.55%), Postives = 84/142 (59.15%), Query Frame = 2
Query:  446 LYPIDTIKTRLQAVRGGGKIN-FKGLYSGLAGNLAGVLPASALFVGVYEPTKQKLLQIFPENLSAAAHLTAGAIGGFAASLVRVPTEVVKQRLQTGQYASAPDAVRLIASKEGFKGLYAGYGSFLLRDLPFDXIQFCIYEQL 868
            L+P+DTIKTRLQ+  G  K   F+G+Y+G+     G  P +A F   YE  KQ LL+     LS   H+ A ++G   A L+RVP+EV+KQR Q    ++    +     +EG KGLY GY S +LR++PF  +QF ++E L
Sbjct:   24 LFPLDTIKTRLQSPLGFSKSGGFRGIYAGVPSTAVGSFPNAAAFFVTYESAKQ-LLRSDSSYLSPIIHMAAASLGEVVACLIRVPSEVIKQRAQVSPSSTTYQMLSATLRQEGIKGLYRGYKSTVLREIPFSLVQFPLWESL 164          
BLAST of CK933338 vs. ExPASy Swiss-Prot
Match: SAMC_MOUSE (S-adenosylmethionine mitochondrial carrier protein OS=Mus musculus GN=Slc25a26 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 6.796e-22
Identity = 57/142 (40.14%), Postives = 80/142 (56.34%), Query Frame = 2
Query:  446 LYPIDTIKTRLQAVRGGGKIN-FKGLYSGLAGNLAGVLPASALFVGVYEPTKQKLLQIFPENLSAAAHLTAGAIGGFAASLVRVPTEVVKQRLQTGQYASAPDAVRLIASKEGFKGLYAGYGSFLLRDLPFDXIQFCIYEQL 868
            L+P+DTIKTRLQ+ +G  K   F+G+Y+G+     G  P +A F   YE  K  L      +     H+ A + G   A L+RVP+EVVKQR Q    +        I S+EG +GLY GY S +LR++PF  +QF ++E L
Sbjct:   24 LFPLDTIKTRLQSPQGFNKAGGFRGIYAGVPSAAVGSFPNAAAFFLTYEYVKSLLHTDSTSHFKPVKHMLAASTGEVVACLIRVPSEVVKQRAQVSASSKTLQIFLTILSEEGIQGLYRGYKSTVLREIPFSLVQFPLWESL 165          
BLAST of CK933338 vs. ExPASy Swiss-Prot
Match: SAMC_XENLA (S-adenosylmethionine mitochondrial carrier protein OS=Xenopus laevis GN=slc25a26 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.514e-21
Identity = 57/142 (40.14%), Postives = 82/142 (57.75%), Query Frame = 2
Query:  446 LYPIDTIKTRLQAVRGGGKIN-FKGLYSGLAGNLAGVLPASALFVGVYEPTKQKLLQIFPENLSAAAHLTAGAIGGFAASLVRVPTEVVKQRLQTGQYASAPDAVRLIASKEGFKGLYAGYGSFLLRDLPFDXIQFCIYEQL 868
            L+P+DTIKTRLQ+  G  K   F+G+Y+G+     G  P +A F   YE  K + L      LS   H+ A  +G   A L+RVP+EV+KQR Q    ++    + +   +EG KGLY GY S +LR++PF  +QF ++E L
Sbjct:   24 LFPLDTIKTRLQSPLGFSKSGGFRGIYAGVPSTAVGSFPNAAAFFVTYESAK-RFLGSDSSYLSPIIHMAAAFLGELVACLIRVPSEVIKQRAQVSPSSTTYQMLSVTLREEGIKGLYRGYKSTVLREIPFSLVQFPLWEFL 164          
BLAST of CK933338 vs. ExPASy Swiss-Prot
Match: YDE9_SCHPO (Uncharacterized mitochondrial carrier C12B10.09 OS=Schizosaccharomyces pombe GN=SPAC12B10.09 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.282e-20
Identity = 61/147 (41.50%), Postives = 83/147 (56.46%), Query Frame = 2
Query:  446 LYPIDTIKTRLQA----VRGGGKINFKGLYSGLAGNLAGVLPASALFVGVYEPTKQKLLQIFPENLSAAAHLTAGAIGGFAASLVRVPTEVVKQRLQT--GQYASAPDAVRLIASKEGFKGLYAGYGSFLLRDLPFDXIQFCIYEQL 868
            L+PIDT+KTRLQA    V+ GG   F G+Y GL   L G  P ++LF   YE  K +L Q          H+ + ++G  AA +VRVPTEV+KQR Q   G  +S      ++ S   ++  YAGYG  + R++PF  IQF I+E L
Sbjct:  100 LFPIDTLKTRLQAKGGFVKNGG---FHGVYRGLGSILVGSAPGASLFFTTYENMKSRLSQSGLGLSDPQIHMCSASLGEIAACIVRVPTEVIKQRAQASGGTLSSRNILQTILKSNNVWRDFYAGYGITIAREIPFTLIQFPIWEHL 243          
BLAST of CK933338 vs. ExPASy Swiss-Prot
Match: SAMC_BOVIN (S-adenosylmethionine mitochondrial carrier protein OS=Bos taurus GN=SLC25A26 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.674e-20
Identity = 57/142 (40.14%), Postives = 79/142 (55.63%), Query Frame = 2
Query:  446 LYPIDTIKTRLQAVRGGGKIN-FKGLYSGLAGNLAGVLPASALFVGVYEPTKQKLLQIFPENLSAAAHLTAGAIGGFAASLVRVPTEVVKQRLQTGQYASAPDAVRLIASKEGFKGLYAGYGSFLLRDLPFDXIQFCIYEQL 868
            L+P+DTIKTRLQ+ +G  K   F G+Y+G+     G  P +A F   YE  K  L       L    H+ A ++G   A L+RVP+EVVKQR Q    +        I  +EG +GLY GY S +LR++PF  +QF ++E L
Sbjct:   24 LFPLDTIKTRLQSPQGFYKAGGFYGVYAGVPSTAIGSFPNAAAFFVTYEYVKWILHTDSSSYLMPVTHMLAASVGEVVACLIRVPSEVVKQRAQVSASSGTFHIFSNILCQEGIQGLYRGYKSTVLREIPFSLVQFPLWESL 165          
BLAST of CK933338 vs. ExPASy Swiss-Prot
Match: SAMC_HUMAN (S-adenosylmethionine mitochondrial carrier protein OS=Homo sapiens GN=SLC25A26 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.870e-20
Identity = 57/142 (40.14%), Postives = 78/142 (54.93%), Query Frame = 2
Query:  446 LYPIDTIKTRLQAVRGGGKIN-FKGLYSGLAGNLAGVLPASALFVGVYEPTKQKLLQIFPENLSAAAHLTAGAIGGFAASLVRVPTEVVKQRLQTGQYASAPDAVRLIASKEGFKGLYAGYGSFLLRDLPFDXIQFCIYEQL 868
            L+P+DTIKTRLQ+ +G  K   F G+Y+G+     G  P +A F   YE  K  L       L+   H+ A + G   A L+RVP+EVVKQR Q             I  +EG +GLY GY S +LR++PF  +QF ++E L
Sbjct:   24 LFPLDTIKTRLQSPQGFNKAGGFHGIYAGVPSAAIGSFPNAAAFFITYEYVKWFLHADSSSYLTPMKHMLAASAGEVVACLIRVPSEVVKQRAQVSASTRTFQIFSNILYEEGIQGLYRGYKSTVLREIPFSLVQFPLWESL 165          
BLAST of CK933338 vs. ExPASy Swiss-Prot
Match: SAMC_DROME (S-adenosylmethionine mitochondrial carrier protein homolog OS=Drosophila melanogaster GN=CG4743 PE=2 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.870e-20
Identity = 60/143 (41.96%), Postives = 80/143 (55.94%), Query Frame = 2
Query:  446 LYPIDTIKTRLQAVRGGGKIN-FKGLYSGLAGNLAGVLPASALFVGVYEPTKQKLLQIFPENLSAAAHLTAGAIGGFAASLVRVPTEVVKQRLQT--GQYASAPDAVRLIASKEGFK-GLYAGYGSFLLRDLPFDXIQFCIYE 862
            L+PIDT+KTRLQ+  G  +   F+G+Y GLA   AG  P +ALF   YE  KQ L  +     S   H+ A +     A L+RVP E+ KQR QT  G   S    +      EG K GLY G+GS ++R++PF  IQF ++E
Sbjct:   31 LFPIDTVKTRLQSELGFWRAGGFRGIYKGLAPAAAGSAPTAALFFCTYECGKQFLSSVTQTKDSPYVHMAAASAAEVLACLIRVPVEIAKQRSQTLQGNKQSGLQILLRAYRTEGLKRGLYRGFGSTIMREIPFSLIQFPLWE 173          
BLAST of CK933338 vs. ExPASy Swiss-Prot
Match: YQ73_SCHPO (Uncharacterized mitochondrial carrier C1442.03 OS=Schizosaccharomyces pombe GN=SPCC1442.03 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.385e-19
Identity = 66/170 (38.82%), Postives = 86/170 (50.59%), Query Frame = 2
Query:  446 LYPIDTIKTRLQAVRGGGKIN---------------FKGLYSGLAGNLAGVLPASALFVGVYEPTKQKLLQIF--PENLSAAAHLTAGAIGGFAASLVRVPTEVVKQRLQTG------------QYASAPDAVRLIASKEGFKGLYAGYGSFLLRDLPFDXIQFCIYEQL 868
            ++ +DT+KTR QA     K N               F GLYSG+   L G LPA+ALF   YE TK+ L+  +  PE L     L AG +G   AS+V VP+EV+K RLQ               Y S   AV+ IA +EG K  + GY + +LRD+PF   Q   YE+L
Sbjct:   33 MHSLDTVKTRQQAALYTNKYNGMVKCYSTILCEEGVFHGLYSGVCPMLIGSLPATALFFSSYEYTKRHLMSNYNLPETL---CFLLAGFVGDLFASVVYVPSEVLKTRLQLQGRYNNPHFQSNYNYPSFRGAVKQIAKQEGMKTFFYGYRATILRDIPFSGFQLLFYEKL 199          
BLAST of CK933338 vs. ExPASy Swiss-Prot
Match: PET8_ASHGO (Putative mitochondrial carrier protein PET8 OS=Ashbya gossypii GN=PET8 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.200e-18
Identity = 60/152 (39.47%), Postives = 90/152 (59.21%), Query Frame = 2
Query:  449 YPIDTIKTRLQAVRGGGKIN--FKGLYSGLAGNLAGVLPASALFVGVYEPTKQKLLQIF-----PENLSAA-AHLTAGAIGGFAASLVRVPTEVVKQRLQTGQYASAPDAVRLI---ASKEG-FKGLYAGYGSFLLRDLPFDXIQFCIYEQL 868
            +PIDT+KTRLQA +GG   N  ++G+Y GL   +    P ++LF   Y+  KQ+L  +       E L+    H+ + ++G  +A LVRVP EV+KQR QT    S+   +RLI    + EG  +GLY G+ + ++R++PF  IQF +YE L
Sbjct:   24 FPIDTLKTRLQA-KGGFFHNGGYRGIYRGLGSAVVASAPGASLFFVTYDSMKQQLRPVMGRWTASEQLAEVLTHMLSSSLGEMSACLVRVPAEVIKQRTQTHHTNSSLQTLRLILRDPTGEGVVRGLYRGWWTTIMREIPFTCIQFPLYEYL 174          
The following BLAST results are available for this feature:
BLAST of CK933338 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
SAMC_DANRE1.120e-2442.96S-adenosylmethionine mitochondrial carrier protein... [more]
SAMC_XENTR4.706e-2341.55S-adenosylmethionine mitochondrial carrier protein... [more]
SAMC_MOUSE6.796e-2240.14S-adenosylmethionine mitochondrial carrier protein... [more]
SAMC_XENLA1.514e-2140.14S-adenosylmethionine mitochondrial carrier protein... [more]
YDE9_SCHPO1.282e-2041.50Uncharacterized mitochondrial carrier C12B10.09 OS... [more]
SAMC_BOVIN1.674e-2040.14S-adenosylmethionine mitochondrial carrier protein... [more]
SAMC_HUMAN4.870e-2040.14S-adenosylmethionine mitochondrial carrier protein... [more]
SAMC_DROME4.870e-2041.96S-adenosylmethionine mitochondrial carrier protein... [more]
YQ73_SCHPO5.385e-1938.82Uncharacterized mitochondrial carrier C1442.03 OS=... [more]
PET8_ASHGO1.200e-1839.47Putative mitochondrial carrier protein PET8 OS=Ash... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004286_G01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IF_G01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933338 ID=CK933338; Name=CK933338; organism=Citrus sinensis; type=EST; length=868bp
GGGGGACTCAAATCAATTGTCTAGCCACAAATTGGCCATTCCGGGATTTG
GGCTGGACTGTTTGTGATTGAACCCACAATTTTTTTTCACCAAAACAAAA
AACGAGCGCCTCCTTCTGTCTCTTCGCTCGACGACAGGACGGCGAGTACA
AAGCTCTTGTTGTATAACTGTCACCGGCTGTTGTTGAGTTACATATTGTC
ACTATTCAGTTAGCTACTATCATTGAATTGGGAGTTATTGAACCCTAATG
GCTCCTTTGACACTAGGCGCCGATGCAAAAACCTCTTCAGATGTATCCAA
TTGGAAAATGCAAAACTTGCAGCTAGAGACAAAAAAGCTATTTGCATCTG
TTAGCATGGGTGAAGAAAAACCATTTGATTTCTTTCGAATTTTGTTTGAG
GGTGTTATCGCAGGAGGTACAGCTGGTGTTGTGGTTGAAACGGCTTTGTA
TCCTATTGATACCATAAAGACACGGCTACAGGCTGTTCGTGGTGGAGGAA
AAATAAATTTCAAGGGTCTTTATTCTGGATTGGCTGGAAATCTTGCTGGT
GTCTTACCGGCTTCTGCGTTGTTTGTCGGTGTGTATGAACCTACAAAGCA
GAAATTGTTGCAGATCTTTCCTGAAAATCTTAGTGCTGCTGCTCATCTGA
CAGCGGGTGCCATAGGAGGATTTGCTGCTTCCCTTGTTCGTGTTCCGACA
GAGGTTGTAAAGCAAAGATTGCAGACTGGGCAATATGCTTCAGCTCCTGA
CGCAGTCCGGCTTATTGCTTCTAAGGAAGGATTTAAGGGTCTTTATGCGG
GATATGGATCTTTTCTATTGCGGGATTTGCCCTTTGATGNCATTCAATTC
TGCATCTACGAGCAGCTT
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