CK933341
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933341 vs. ExPASy Swiss-Prot
Match: RS191_ARATH (40S ribosomal protein S19-1 OS=Arabidopsis thaliana GN=RPS19A PE=2 SV=1) HSP 1 Score: 249.595 bits (636), Expect = 9.176e-66 Identity = 121/142 (85.21%), Postives = 129/142 (90.85%), Query Frame = 2 Query: 62 METAKNVKDVSPHEFVKAYAAHLKRSGKQIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSRGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIAV 487 M T K VKDVSPH+FVKAYA+HLKRSGK IELPTW DIVKTG LKELAPYDPDWYYIRAASMARK+YLRGGLGVG+FRRIYGG KRNGSRPPHF KS G +ARHIL QL+ NI+ELD+KGGRRITSSGQRDLDQVAGRIAV Sbjct: 1 MATGKTVKDVSPHDFVKAYASHLKRSGK-IELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITSSGQRDLDQVAGRIAV 141
BLAST of CK933341 vs. ExPASy Swiss-Prot
Match: RS193_ARATH (40S ribosomal protein S19-3 OS=Arabidopsis thaliana GN=RPS19C PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 4.554e-65 Identity = 121/141 (85.82%), Postives = 127/141 (90.07%), Query Frame = 2 Query: 62 METAKNVKDVSPHEFVKAYAAHLKRSGKQIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSRGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIA 484 M T K VKDVSPHEFVKAYAAHLKRSGK IELP W DIVKTG LKELAPYDPDWYYIRAASMARK+YLRGGLGVG+FRRIYGG KRNGSRPPHF KS G VARHIL QLQ NI++LD+KGGR+ITSSGQRDLDQVAGRIA Sbjct: 1 MATGKTVKDVSPHEFVKAYAAHLKRSGK-IELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSSGQRDLDQVAGRIA 140
BLAST of CK933341 vs. ExPASy Swiss-Prot
Match: RS192_ARATH (40S ribosomal protein S19-2 OS=Arabidopsis thaliana GN=RPS19B PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 3.855e-64 Identity = 119/141 (84.40%), Postives = 127/141 (90.07%), Query Frame = 2 Query: 62 METAKNVKDVSPHEFVKAYAAHLKRSGKQIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSRGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIA 484 M T K VKDVSPH+FVKAYA+HLKRSGK IELP W DIVKTG LKELAPYDPDWYYIRAASMARKIYLRGGLGVG+FRRIYGG KRNGSRPPHF KS G +ARHIL QL+ +I+ELD+KGGRRITSSGQRDLDQVAGRIA Sbjct: 1 MATGKTVKDVSPHDFVKAYASHLKRSGK-IELPLWTDIVKTGRLKELAPYDPDWYYIRAASMARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKGGRRITSSGQRDLDQVAGRIA 140
BLAST of CK933341 vs. ExPASy Swiss-Prot
Match: RS19_ORYSJ (40S ribosomal protein S19 OS=Oryza sativa subsp. japonica GN=RPS19A PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 8.058e-54 Identity = 101/140 (72.14%), Postives = 118/140 (84.29%), Query Frame = 2 Query: 68 TAKNVKDVSPHEFVKAYAAHLKRSGKQIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSRGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIAV 487 TA+ VKDV+PHEFVKAY+AHLKRSGK +ELP W DIVKT KEL PYDPDWYY RAAS+ARKIYLR G+GVG F++IYGG +RNGSRPPHF KS G+++R+IL QLQ II++D KGGR ITS G+RDLDQVAGR+ V Sbjct: 5 TARTVKDVNPHEFVKAYSAHLKRSGK-MELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKIYLRQGIGVGGFQKIYGGRQRNGSRPPHFCKSSGAISRNILQQLQKMGIIDVDPKGGRLITSQGRRDLDQVAGRVDV 143
BLAST of CK933341 vs. ExPASy Swiss-Prot
Match: RS19_MYAAR (40S ribosomal protein S19 OS=Mya arenaria GN=RPS19 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 9.240e-42 Identity = 76/136 (55.88%), Postives = 104/136 (76.47%), Query Frame = 2 Query: 77 NVKDVSPHEFVKAYAAHLKRSGKQIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSRGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIA 484 +VKDVS HEF +A+AA LK+SGK +++P W D VKTG KEL+PY+PDWY+IRAAS+ R +Y+R G+GSF +IYGG +R G+ P HF K+ GS++R +L L+ I+E D GGRR+TS G+RDLD++A +IA Sbjct: 4 SVKDVSSHEFTRAFAAFLKKSGK-MKVPEWTDFVKTGMFKELSPYEPDWYFIRAASICRHLYIRSPAGIGSFEKIYGGRRRRGTAPSHFCKANGSISRRLLQSLEGLKIVEKDPNGGRRLTSQGRRDLDRIAAQIA 138
BLAST of CK933341 vs. ExPASy Swiss-Prot
Match: RS19_BRABE (40S ribosomal protein S19 OS=Branchiostoma belcheri GN=RPS19 PE=2 SV=1) HSP 1 Score: 163.31 bits (412), Expect = 8.649e-40 Identity = 77/135 (57.04%), Postives = 103/135 (76.30%), Query Frame = 2 Query: 80 VKDVSPHEFVKAYAAHLKRSGKQIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSRGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIA 484 VKDV+ EFVKA+AA LK+SGK ++LP W D+VKT KELAPYDPDW+Y+RAAS AR +Y+RGG+GVG+ +IYGG KR G++P F V+R +L L+ ++E D+ GGRR+TS GQRDLD++AG++A Sbjct: 7 VKDVNQQEFVKAFAAFLKKSGK-LKLPEWVDLVKTAPHKELAPYDPDWFYLRAASTARHLYMRGGVGVGAMCKIYGGRKRRGTKPAKFRVCSRGVSRTVLQSLEGIKMVEKDAAGGRRLTSQGQRDLDRIAGQVA 140
BLAST of CK933341 vs. ExPASy Swiss-Prot
Match: RS19_MYXGL (40S ribosomal protein S19 OS=Myxine glutinosa GN=rps19 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.516e-39 Identity = 76/138 (55.07%), Postives = 104/138 (75.36%), Query Frame = 2 Query: 80 VKDVSPHEFVKAYAAHLKRSGKQIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSRGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIAVVA 493 VKDV+ EFVKA AA K+SGK ++ P W D VK G KELAP+D DWYYIR AS+AR +Y+RGG+GVG+ +IYGG +RNG+RP H+S+ +VAR +L L+ ++E D GGRR+TS GQRD+D++AG++ V++ Sbjct: 6 VKDVNQQEFVKALAAFFKKSGK-LKKPDWVDTVKLGKHKELAPFDIDWYYIRTASVARHLYMRGGVGVGAMTKIYGGRQRNGTRPSHYSRGSRNVARKVLQSLEMLKMVEKDPNGGRRLTSIGQRDMDRIAGQVVVLS 142
BLAST of CK933341 vs. ExPASy Swiss-Prot
Match: RS19_RAT (40S ribosomal protein S19 OS=Rattus norvegicus GN=Rps19 PE=2 SV=3) HSP 1 Score: 159.458 bits (402), Expect = 1.249e-38 Identity = 77/135 (57.04%), Postives = 99/135 (73.33%), Query Frame = 2 Query: 80 VKDVSPHEFVKAYAAHLKRSGKQIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSRGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIA 484 VKDV+ EFV+A AA LK+SGK +++P W D VK KELAPYD +W+Y RAAS AR +YLRGG GVGS +IYGG +RNG RP HFS+ SVAR +L L+ ++E D GGR++T GQRDLD++AG++A Sbjct: 6 VKDVNQQEFVRALAAFLKKSGK-LKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVA 139
BLAST of CK933341 vs. ExPASy Swiss-Prot
Match: RS19_MOUSE (40S ribosomal protein S19 OS=Mus musculus GN=Rps19 PE=1 SV=3) HSP 1 Score: 159.458 bits (402), Expect = 1.249e-38 Identity = 77/135 (57.04%), Postives = 99/135 (73.33%), Query Frame = 2 Query: 80 VKDVSPHEFVKAYAAHLKRSGKQIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSRGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIA 484 VKDV+ EFV+A AA LK+SGK +++P W D VK KELAPYD +W+Y RAAS AR +YLRGG GVGS +IYGG +RNG RP HFS+ SVAR +L L+ ++E D GGR++T GQRDLD++AG++A Sbjct: 6 VKDVNQQEFVRALAAFLKKSGK-LKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVRPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVA 139
BLAST of CK933341 vs. ExPASy Swiss-Prot
Match: RS19_PONAB (40S ribosomal protein S19 OS=Pongo abelii GN=RPS19 PE=2 SV=3) HSP 1 Score: 157.147 bits (396), Expect = 6.198e-38 Identity = 76/135 (56.30%), Postives = 98/135 (72.59%), Query Frame = 2 Query: 80 VKDVSPHEFVKAYAAHLKRSGKQIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSRGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRIA 484 VKDV+ EFV+A AA LK+SGK +++P W D VK KELAPYD +W+Y RAAS AR +YLRGG GVGS +IYGG +RNG P HFS+ SVAR +L L+ ++E D GGR++T GQRDLD++AG++A Sbjct: 6 VKDVNQQEFVRALAAFLKKSGK-LKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVA 139 The following BLAST results are available for this feature:
BLAST of CK933341 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933341 ID=CK933341; Name=CK933341; organism=Citrus sinensis; type=EST; length=609bpback to top |