CK933351

Overview
NameCK933351
Unique NameCK933351
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933351 vs. ExPASy Swiss-Prot
Match: ADF2_ARATH (Actin-depolymerizing factor 2 OS=Arabidopsis thaliana GN=ADF2 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.602e-30
Identity = 62/71 (87.32%), Postives = 66/71 (92.96%), Query Frame = 1
Query:    4 VYDXXFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 216
            +YD  FVTAENCQKS+IFFIAWSPDTA+VR KMIYASSKDRFKRELDGIQVELQATDP+EMGLDVFK R N
Sbjct:   67 IYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFKSRTN 137          
BLAST of CK933351 vs. ExPASy Swiss-Prot
Match: ADF1_PETHY (Actin-depolymerizing factor 1 OS=Petunia hybrida GN=ADF1 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.788e-29
Identity = 63/71 (88.73%), Postives = 65/71 (91.55%), Query Frame = 1
Query:    4 VYDXXFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 216
            VYD  FVTAENCQKSRIFFIAW PDTARVRSKMIYASSKDRFKRELDGIQVELQA DP+EMGLDV + RAN
Sbjct:   69 VYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVELQACDPTEMGLDVIQSRAN 139          
BLAST of CK933351 vs. ExPASy Swiss-Prot
Match: ADF2_PETHY (Actin-depolymerizing factor 2 OS=Petunia hybrida GN=ADF2 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.159e-28
Identity = 63/74 (85.14%), Postives = 67/74 (90.54%), Query Frame = 1
Query:    4 VYDXXFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN*IK 225
            VYD  F+T EN QKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDP+EMGLDVF+ RA  I+
Sbjct:   69 VYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVFRSRAGGIE 142          
BLAST of CK933351 vs. ExPASy Swiss-Prot
Match: ADF1_ARATH (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana GN=ADF1 PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.159e-28
Identity = 60/71 (84.51%), Postives = 65/71 (91.55%), Query Frame = 1
Query:    4 VYDXXFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 216
            +YD  FVTAENCQKS+IFFIAW PD A+VRSKMIYASSKDRFKRELDGIQVELQATDP+EM LDVF+ RAN
Sbjct:   69 IYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVFRSRAN 139          
BLAST of CK933351 vs. ExPASy Swiss-Prot
Match: ADF7_ORYSJ (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica GN=ADF7 PE=3 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 1.977e-28
Identity = 59/71 (83.10%), Postives = 66/71 (92.96%), Query Frame = 1
Query:    4 VYDXXFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 216
            ++D  FVT ENCQKS+IFFIAWSPDT+RVRSKMIYASSKDRFKRELDGIQVELQATDP+E+GLDV + RAN
Sbjct:   69 IFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVELQATDPTEVGLDVIRGRAN 139          
BLAST of CK933351 vs. ExPASy Swiss-Prot
Match: ADF10_ARATH (Actin-depolymerizing factor 10 OS=Arabidopsis thaliana GN=ADF10 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.371e-28
Identity = 59/71 (83.10%), Postives = 63/71 (88.73%), Query Frame = 1
Query:    4 VYDXXFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 216
            VYD  F T ENCQKS+IFFIAWSPDT+RVRSKM+YASSKDRFKRELDGIQVELQATDPSEM LD+ K R N
Sbjct:   69 VYDYDFTTPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSLDIIKGRVN 139          
BLAST of CK933351 vs. ExPASy Swiss-Prot
Match: ADF4_ARATH (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana GN=ADF4 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 5.751e-28
Identity = 59/71 (83.10%), Postives = 63/71 (88.73%), Query Frame = 1
Query:    4 VYDXXFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 216
            +YD  FVTAENCQKS+IFFIAW PD A+VRSKMIYASSKDRFKRELDGIQVELQATDP+EM LDV K R N
Sbjct:   69 IYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMDLDVLKSRVN 139          
BLAST of CK933351 vs. ExPASy Swiss-Prot
Match: ADF8_ARATH (Actin-depolymerizing factor 8 OS=Arabidopsis thaliana GN=ADF8 PE=2 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 4.868e-27
Identity = 56/71 (78.87%), Postives = 63/71 (88.73%), Query Frame = 1
Query:    4 VYDXXFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRAN 216
            VYD  F T +NCQKS+IFFIAWSPDT+RVRSKM+YASSKDRFKRE++GIQVELQATDPSEM LD+ K R N
Sbjct:   69 VYDFDFTTEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREMEGIQVELQATDPSEMSLDIIKGRLN 139          
BLAST of CK933351 vs. ExPASy Swiss-Prot
Match: ADF1_ORYSJ (Actin-depolymerizing factor 1 OS=Oryza sativa subsp. japonica GN=ADF1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 6.358e-27
Identity = 56/70 (80.00%), Postives = 64/70 (91.43%), Query Frame = 1
Query:    4 VYDXXFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 213
            V+D  FVT ENCQKS+IFFI+W+PDT+RVRSKM+YASSKDRFKRELDGIQVELQATDPSEM +D+ K RA
Sbjct:   69 VFDFDFVTDENCQKSKIFFISWAPDTSRVRSKMLYASSKDRFKRELDGIQVELQATDPSEMSMDIVKSRA 138          
BLAST of CK933351 vs. ExPASy Swiss-Prot
Match: ADF_LILLO (Actin-depolymerizing factor OS=Lilium longiflorum PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 8.304e-27
Identity = 56/70 (80.00%), Postives = 64/70 (91.43%), Query Frame = 1
Query:    4 VYDXXFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 213
            V+D  FVT ENCQKS+IFFI+WSPDT+RVRSKM+YAS+KDRFKRELDGIQVELQATDPSEM +D+ K RA
Sbjct:   69 VFDFDFVTDENCQKSKIFFISWSPDTSRVRSKMLYASTKDRFKRELDGIQVELQATDPSEMSMDIIKARA 138          
The following BLAST results are available for this feature:
BLAST of CK933351 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
ADF2_ARATH3.602e-3087.32Actin-depolymerizing factor 2 OS=Arabidopsis thali... [more]
ADF1_PETHY1.788e-2988.73Actin-depolymerizing factor 1 OS=Petunia hybrida G... [more]
ADF2_PETHY1.159e-2885.14Actin-depolymerizing factor 2 OS=Petunia hybrida G... [more]
ADF1_ARATH1.159e-2884.51Actin-depolymerizing factor 1 OS=Arabidopsis thali... [more]
ADF7_ORYSJ1.977e-2883.10Actin-depolymerizing factor 7 OS=Oryza sativa subs... [more]
ADF10_ARATH3.371e-2883.10Actin-depolymerizing factor 10 OS=Arabidopsis thal... [more]
ADF4_ARATH5.751e-2883.10Actin-depolymerizing factor 4 OS=Arabidopsis thali... [more]
ADF8_ARATH4.868e-2778.87Actin-depolymerizing factor 8 OS=Arabidopsis thali... [more]
ADF1_ORYSJ6.358e-2780.00Actin-depolymerizing factor 1 OS=Oryza sativa subs... [more]
ADF_LILLO8.304e-2780.00Actin-depolymerizing factor OS=Lilium longiflorum ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004286_F02 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IF_F02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933351 ID=CK933351; Name=CK933351; organism=Citrus sinensis; type=EST; length=604bp
GGGGTGTATGATTANNNTTTTGTTACCGCAGAGAACTGCCAAAAAAGCAG
GATTTTCTTCATTGCATGGTCTCCCGACACTGCAAGAGTAAGAAGCAAGA
TGATTTATGCAAGCTCCAAGGACAGGTTCAAGAGAGAGCTAGATGGCATT
CAAGTGGAGCTGCAGGCAACTGATCCATCTGAGATGGGTCTTGACGTATT
TAAAGACCGTGCCAACTAAATAAAGGCTCCTGATCTCAGCAATTGAGATT
GTTTTTATCTTTTGTGCTTTACCTAAAGGTGAAATGTTAATAGTTTGTGG
CGGCAGCTTGAATCTAACTGAATTATGATATTGGTTTGTTGTTCAAGTTT
CACCGATGCAGTATTCTCGTCTAGAACCATTTTAGTGGTCTTTATGATGT
CTTTATTGATTTGTTGTGGTGTGGAAGTTATGGGATGAGTGGCTACTTAT
AGCTATTTCGTCAAGCTAAGGTGTTTCAATTGATGGGGGATGGATAACCC
TCTGTTAGGGTTGTTTTTACTTTGAAAATGGATGTTTCATTTTGAACTTT
ATAAATGGATGTTTCATTTTTCTTACAAAAAAAAAAAAAAAAAAAAAAAA
AAAA
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