CK933389

Overview
NameCK933389
Unique NameCK933389
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933389 vs. ExPASy Swiss-Prot
Match: AAPC_CENCI (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.983e-30
Identity = 83/208 (39.90%), Postives = 114/208 (54.81%), Query Frame = 2
Query:  194 LPKVVLTSAGGSEAELYLFGGCVTSWKASNDKDLLFVRPDAVFNKKKPISGGVPHCFPQFGP-GPMQQHGFARNMDWSI-LDSENVEGNPVI----TLELKDGPYSRAMWDFSFRALFKVILNTK---SISTELTITNTDNKPFSFSSALHTYFRASVTGASVKGLKGCKTLNKDPDPKNPMEGKEERDRVTFPGFVDCIYLDAPSVV 790
            L KVVL  A    AE+YL+GG VTSWK  N ++LLF+   A+F   K I GG+P C PQFG  G ++QHGFARN  WSI  D   +  NP I     L L+       +W  SF    +V L      S+++ +  TNTD +PFS++ A HTYF   V+  S   ++G +T++   + K      E+ D + F   VD +YL APS +
Sbjct:   33 LEKVVLRGARNCCAEIYLYGGQVTSWKNDNGEELLFLSSKAIFKPPKAIRGGIPICLPQFGTHGNLEQHGFARNRFWSIDNDPPPLPVNPAIKAFVDLILRPAEEDLKIWPHSFEFRLRVALGPSGDLSLTSRIRNTNTDGRPFSYTFAYHTYF--FVSDISEVRVEGLETMDYLDNLKAKERFTEQGDAIVFESEVDKVYLAAPSKI 238          
BLAST of CK933389 vs. ExPASy Swiss-Prot
Match: YEAD_ECOLI (Putative glucose-6-phosphate 1-epimerase OS=Escherichia coli (strain K12) GN=yeaD PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.211e-14
Identity = 60/188 (31.91%), Postives = 89/188 (47.34%), Query Frame = 2
Query:  230 EAELYLFGGCVTSWKASNDKDLLFVRPDAVFNKKKPISGGVPHCFPQFGPGPMQ---QHGFARNMDWSILDSENVEGNPVITLELKDGPYSRAMW--DFSFRALFKVILNTKSISTELTITNTDNKPFSFSSALHTYFR-ASVTGASVKGLKGCKTLNKDPDPKNPMEGKEERDRVTFPGFVDCIYLD 775
            +A   L G  + SWK + ++++L++  +  F     I GGVP C+P FGP   Q    HGFARN+ W++           +T EL     ++  W  DF+  A F+V    K+   +L      +  F  +SALHTYF    +   SV GL G + ++K  D K   E        TFP   D +YL+
Sbjct:   37 KASFALQGAHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLPWTLKSHHEDADGVALTFELTQSEETKKFWPHDFTLLAHFRV---GKTCEIDL----ESHGEFETTSALHTYFNVGDIAKVSVSGL-GDRFIDKVNDAK---ENVLTDGIQTFPDRTDRVYLN 213          
BLAST of CK933389 vs. ExPASy Swiss-Prot
Match: YMY9_YEAST (Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae GN=YMR099C PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.679e-13
Identity = 60/208 (28.85%), Postives = 89/208 (42.79%), Query Frame = 2
Query:  200 KVVLTSAGGSEAELYL--FGGCVTSWKASNDKDLLFVRPDAVFNKKKPISGGVPHCFPQFGP-------GPMQQHGFARNMDWSILDSENVEGNPVITLELKD---GPYSRAMWDFSFRALFKVILNTKSISTELTITNT-DNKPFSFSSALHTYFR-ASVTGASVKGLKGCK----TLNKDPDPKNPMEGKEERDRVTFPGFVDCIY 769
            +VVLT        +++  +G  V SWK  +++ L ++   A  +  KP+ GG+P  FP FG          + QHG ARN  W  L  +  E  P +   LK     P    +W   +  +  V L +  + T + + NT  +K   F+   HTYFR   + G  V  L G K     L +    K+P+        VTF    D IY
Sbjct:    9 EVVLTHPADETTSVHILKYGATVYSWKLKSEEQL-WLSTAAKLDGSKPVRGGIPLVFPVFGKNSTDEHLSKLPQHGLARNSTWEFL-GQTKENPPTVQFGLKPEIANPELTKLWPMDYLLILTVELGSDYLKTAIEVENTSSSKELKFNWLFHTYFRIEDIEGTMVSNLAGMKLYDQLLKESYVDKHPV--------VTFNQETDVIY 206          
The following BLAST results are available for this feature:
BLAST of CK933389 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AAPC_CENCI5.983e-3039.90Putative glucose-6-phosphate 1-epimerase OS=Cenchr... [more]
YEAD_ECOLI1.211e-1431.91Putative glucose-6-phosphate 1-epimerase OS=Escher... [more]
YMY9_YEAST8.679e-1328.85Glucose-6-phosphate 1-epimerase OS=Saccharomyces c... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004286_B03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933389 ID=CK933389; Name=CK933389; organism=Citrus sinensis; type=EST; length=804bp
GGGGGCCGATCGTTAAGTTGAAGCGCCAGAATCAATCGAATTTTTAATGG
CAACGGCTTCAATGCCCTTTTCGCTCCCCAGCCTAAACTACCGGGCTGTA
CGAGTAGGACGAGTCAATCGAAAACAAGGTGTGGCCTTTGCAACAATGAA
TAAAGAAACTTTAGGAGTGCGAGTGACAGAAGGTGAAGGCAGTTTGCCCA
AGGTTGTGCTTACTTCTGCTGGCGGTAGTGAAGCTGAGCTATATCTGTTT
GGAGGATGTGTTACATCGTGGAAAGCTTCTAATGACAAAGATCTCCTTTT
TGTTAGACCTGATGCTGTTTTTAACAAGAAAAAACCTATCAGTGGAGGAG
TTCCACATTGCTTCCCACAGTTTGGACCTGGCCCAATGCAGCAGCATGGA
TTTGCAAGGAATATGGATTGGTCCATTCTTGACTCAGAAAATGTGGAAGG
AAATCCTGTTATAACTCTGGAGCTAAAGGATGGTCCTTACAGTCGTGCCA
TGTGGGATTTCAGTTTTCGAGCTTTATTCAAGGTCATTCTAAATACCAAG
AGTATTTCTACAGAGTTGACCATCACAAACACAGACAACAAGCCATTTTC
GTTTAGTTCTGCTTTGCACACATACTTCAGGGCTTCTGTCACAGGAGCAT
CTGTGAAAGGTTTGAAAGGTTGCAAAACTTTAAATAAAGACCCAGATCCT
AAAAATCCAATGGAGGGAAAGGAGGAAAGGGATAGGGTCACTTTTCCTGG
ATTTGTAGATTGCATTTACCTTGATGCCCCGAGTGTGGTACACCTTGACA
ATGG
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