CK933416
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933416 vs. ExPASy Swiss-Prot
Match: UBR7_MOUSE (Putative E3 ubiquitin-protein ligase UBR7 OS=Mus musculus GN=Ubr7 PE=2 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 8.000e-55 Identity = 111/245 (45.31%), Postives = 146/245 (59.59%), Query Frame = 3 Query: 117 EAEQTISINEYLNDVEEKELEADLVLGGDEGKECTYSKGYMKRQAIFSCLTCAPEGN--AGVCTACSLTCHDGHEIVELWTKRNFRCDCGNSKFGEFFCKLFPSKDVENAENSYNHNFKGVYCTCNRPYPDPDVEEQVEMIQCCICEDWFHEEHIGLEPSDEISRDDEGEPVYEDFICKACSAVCSFLSTYPQTIWAAGLRRNAGCNTNKDKDVLEEIPSAGGSG-----KLENGICSNGSSRED 830 E E +S+ + L + EE E EA VLGG + ++C+YS+G + RQA+++C TC PEG AG+C ACS CH H++ EL+TKRNFRCDCGNSKF CKLFP K N+ N YN NF G+YC C RPYPDP+ E EMIQC +CEDWFH H+G P + S D +++ +C+AC CSFL Y + A + + D L +P+A G G K ENG + +ED Sbjct: 13 ELEPVVSLVDVLEEDEELENEACAVLGGSDSEKCSYSQGSVGRQALYACSTCTPEGEEPAGICLACSYECHGSHKLFELYTKRNFRCDCGNSKFKNLECKLFPDKSKVNSCNKYNDNFFGLYCVCKRPYPDPEDEVPDEMIQCVVCEDWFHGRHLGAIPPE--SGD------FQEMVCQACMRRCSFLWAYAAQL--------AVTRISAEDDGL--LPNATGMGDEDVSKPENGAPQDNGLKED 239
BLAST of CK933416 vs. ExPASy Swiss-Prot
Match: UBR7_HUMAN (Putative E3 ubiquitin-protein ligase UBR7 OS=Homo sapiens GN=UBR7 PE=1 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 2.328e-54 Identity = 108/242 (44.63%), Postives = 144/242 (59.50%), Query Frame = 3 Query: 117 EAEQTISINEYLNDVEEKELEADLVLGGDEGKECTYSKGYMKRQAIFSCLTCAPEGN--AGVCTACSLTCHDGHEIVELWTKRNFRCDCGNSKFGEFFCKLFPSKDVENAENSYNHNFKGVYCTCNRPYPDPDVEEQVEMIQCCICEDWFHEEHIGLEPSDEISRDDEGEPVYEDFICKACSAVCSFLSTYPQTIWAAGLRRNAGCNTNKDKDVLEEIPSAGGSG--KLENGICSNGSSRED 830 E E +S+ + L + EE E EA VLGG + ++C+YS+G +KRQA+++C TC PEG AG+C ACS CH H++ EL+TKRNFRCDCGNSKF CKL P K N+ N YN NF G+YC C RPYPDP+ E EMIQC +CEDWFH H+G P + S D +++ +C+AC CSFL WA + + +D ++ I G K ENG + + +ED Sbjct: 13 ELEPVVSLVDVLEEDEELENEACAVLGGSDSEKCSYSQGSVKRQALYACSTCTPEGEEPAGICLACSYECHGSHKLFELYTKRNFRCDCGNSKFKNLECKLLPDKAKVNSGNKYNDNFFGLYCICKRPYPDPEDEIPDEMIQCVVCEDWFHGRHLGAIPPE--SGD------FQEMVCQACMKRCSFL-------WAYAAQLAVTKISTEDDGLVRNIDGIGDQEVIKPENGEHQDSTLKED 239
BLAST of CK933416 vs. ExPASy Swiss-Prot
Match: MLO2_SCHPO (Protein mlo2 OS=Schizosaccharomyces pombe GN=mlo2 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.374e-30 Identity = 71/182 (39.01%), Postives = 102/182 (56.04%), Query Frame = 3 Query: 117 EAEQTISINEYLNDVEEKELEADLVLGGDEGKECTYSKGYMKRQAIFSCLTCAPEGNA--GVCTACSLTCHDGHEIVELWTKRNFRCDCGNSKFGEFFCKLFPSKDVENAENSYNHNFKGVYCTCNRPYPDPDVEEQVEMIQCCICEDWFHEEHIGLEPSDEISRDDEGEPVYEDFICKACS 656 E +++ +Y+ E E EA VL CTYS GY+K Q +++CLTC + VC +CS++CH H++V+L+ KR+FRCDCG ++ C L S D +EN YNHNF+G +C C+ Y +P+ EE M QC +CEDWFHE+ + D E +E +C CS Sbjct: 3 ETAHELTVKQYVEQQRELEREAREVLPYSFDT-CTYSMGYLK-QPLYACLTCQKASGSLNAVCYSCSISCHADHDLVDLFNKRHFRCDCGTTRTHSIPCNLRKSVDECGSENDYNHNFEGRFCICDTVY-NPETEEGT-MFQCILCEDWFHEKCLQKTNKGIAIPDAE---TFEWLVCSECS 177
BLAST of CK933416 vs. ExPASy Swiss-Prot
Match: UBR7_DICDI (Putative E3 ubiquitin-protein ligase ubr7 OS=Dictyostelium discoideum GN=ubr7 PE=3 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.204e-26 Identity = 87/247 (35.22%), Postives = 109/247 (44.13%), Query Frame = 3 Query: 123 EQTISINEYLNDV--EEKEL--EADLVLGGDEGKE--CTYSKGYMKRQAIFSCLTCAPEGNA--GVCTACSLTCHDGHEIVELWTKRNFRCDCG---NSKFGEFFCKL-----------------------------------------------FPSKDVENAENSYNHNFKGVYCTCNRPYPDPDVEEQVEMIQCCICEDWFHEEHIGLEPSDEISRDDEGEPVYEDFICKACSAVCSFLSTYPQ 689 ++ ISI E LND EEK L EA D G E CT+ KGY+ Q++F+C TC + G C CS+ CH H++ EL+ KRNFRCDCG F C+L + + N N YNHNFKG YC C+ PY D +E +MIQC CEDWFHE + L S+ GE + D IC C + FL YPQ Sbjct: 65 DEIISIQEALNDQLEEEKNLLEEAKEQEQEDWGDESICTFDKGYIN-QSVFACKTCQLSNDKLFGFCYGCSMHCHLYHDVYELFNKRNFRCDCGTKIQEPNNSFKCQLSGILKEDDNNNVNNINNSNNTTTTTTTTTTTTTTTNNNHLNDIDIGSYDKSQILNERNHYNHNFKGKYCYCDSPY---DYKE--DMIQCIFCEDWFHENCLKLN-SNVTDIPSPGE--FSDLICADCLSKNQFLLLYPQ 302 The following BLAST results are available for this feature:
BLAST of CK933416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933416 ID=CK933416; Name=CK933416; organism=Citrus sinensis; type=EST; length=872bpback to top |