CK933425

Overview
NameCK933425
Unique NameCK933425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length743
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK933425 vs. ExPASy Swiss-Prot
Match: YVRI_CAEEL (GILT-like protein F37H8.5 OS=Caenorhabditis elegans GN=F37H8.5 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.626e-13
Identity = 48/142 (33.80%), Postives = 73/142 (51.41%), Query Frame = 2 
Query:  239 NSKVKLGLYYESLCPYSANFIINYLVKIFEDVDLLSIVDLHLSPWGNAKIRANSTFDCQHGPSECLLNTVEACAIDSWPELNKHFPFIYCI-ESLVYEHKYSH-WETCFDKLELD---PKPIVDCYTSGYGTQLELKYAAET 649
            N K+ + +  E+LCP   NF+   L  I    +  + V++ L P+GNAK+  + T  CQHG  EC +N  E C IDS  +     P + CI ESL  + +++   + CF+KL++     +    C  S  G  L+ K AA T
Sbjct:   73 NQKINITVLIEALCPDCQNFLTKQLYPIVFK-NFANYVNIELVPFGNAKVLEDGTIKCQHGEEECSINKFEGCFIDSMQD-QSPLPTLSCIEESLQKKVEFADAVQQCFEKLQIGGDIQRLTQSCLVSKLGADLQNKAAAAT 212
The following BLAST results are available for this feature:
BLAST of CK933425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YVRI_CAEEL7.626e-1333.80GILT-like protein F37H8.5 OS=Caenorhabditis elegan... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004285_G07 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0003_IVF_G07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933425 ID=CK933425; Name=CK933425; organism=Citrus sinensis; type=EST; length=743bp
GGGGACTGACAATTAATGTCTCCGTGTTGCTTTCATGCGCGAAAATGTCG
TAACTAAACCATTCTCGCACTTTTTCACTTAAGAAGAACGGGGAAAAAAA
AATATCCCTAATTTACGGATTCATCTATGGCTTCTTCTTCTTATTCCTCA
ACAAAAGCCTTATCTCTTGTCTTTTACATTACCTTGTTCTTTCTTGTCTG
GCTTTGTTTCAGCTTCTAGAACTTCACCTTCAGATGTCAACAGTAAAGTC
AAGTTAGGTCTGTACTACGAGTCTTTGTGTCCATACAGTGCCAATTTCAT
TATCAATTACTTGGTTAAAATCTTTGAAGATGTTGATCTGTTATCCATCG
TTGATCTCCATCTTTCTCCCTGGGGGAATGCCAAAATCAGAGCCAACAGC
ACCTTTGATTGCCAGCATGGCCCTTCTGAATGCTTGCTGAACACTGTGGA
AGCTTGTGCGATTGATAGTTGGCCTGAATTGAACAAGCATTTCCCGTTTA
TCTACTGCATTGAGAGTTTAGTGTACGAGCATAAGTATTCTCACTGGGAA
ACATGCTTTGATAAATTGGAACTGGATCCGAAGCCAATTGTTGATTGCTA
TACCAGTGGATATGGAACACAGCTTGAGTTAAAATATGCAGCTGAGACAA
ATTCCCTTGTGCCTCCTCACCAATATGTGCCTTGAGTTGTTGTGGATGGA
CAGCCACTGTATGAGGACNNNGAAAATTTTGTAAGCTATATCT
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