CK933426

Overview
NameCK933426
Unique NameCK933426
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933426 vs. ExPASy Swiss-Prot
Match: SNAG_ARATH (Gamma-soluble NSF attachment protein OS=Arabidopsis thaliana GN=GSNAP PE=2 SV=1)

HSP 1 Score: 331.643 bits (849), Expect = 5.506e-101
Identity = 160/223 (71.75%), Postives = 185/223 (82.96%), Query Frame = 1
Query:   94 SSDPHKLMVKADKLTKLSLTRWSADWKSATQLYEQAANGFRVAKNIEQAKIAFEKASQGQEMLSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPXXXXXXXXXXXXXXXVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAFFE 762
            SSDP K+M KADK+TKL+LTRWSADW+ AT+LYEQAANGFR +   E+AK+A EKAS+GQEM +SPWDAAKHMESAAALA++L  W EVADFYRKASELY ECGR+QP                P+DAIQLYTDAC +LEED ++QMAFDLYRA  NVYIKLEK+ DAATF LR G+AADKC+ATNSQCKAYLSAII+YLYA+D +QAEKCYNDCSQ+DAF +
Sbjct:    2 SSDPDKMMSKADKMTKLTLTRWSADWRGATELYEQAANGFRASNKYEKAKVALEKASKGQEMQASPWDAAKHMESAAALAQKLSIWNEVADFYRKASELYVECGRAQPASDALGKAARALEDVKPDDAIQLYTDACEILEEDGRDQMAFDLYRACANVYIKLEKFTDAATFFLRLGVAADKCDATNSQCKAYLSAIILYLYAHDLQQAEKCYNDCSQIDAFLK 224          

HSP 2 Score: 58.151 bits (139), Expect = 5.506e-101
Identity = 25/39 (64.10%), Postives = 34/39 (87.18%), Query Frame = 2
Query:  755 FLRSDQNRCATKLISAYTEGDVEEIKRVAXXXTISNLDH 871
            FL+SDQ+R A++L++AY EGD+EEIK+VA   T+SNLDH
Sbjct:  222 FLKSDQSRSASRLLTAYNEGDIEEIKKVASASTVSNLDH 260          
BLAST of CK933426 vs. ExPASy Swiss-Prot
Match: SNAG_DICDI (Gamma-soluble NSF attachment protein OS=Dictyostelium discoideum GN=snpC PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.246e-23
Identity = 68/214 (31.78%), Postives = 105/214 (49.07%), Query Frame = 1
Query:  115 MVKADKLTKLSLTRWSADWKSATQLYEQAANGFRVAKNIEQAKIAFEKASQGQEMLSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPXXXXXXXXXXXXXXXVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAF 756
            M + DKL+K ++ RW ADW SA   YE+AAN FR AK  + AK  F + S  Q  +   + AAK ME+A+A+AKEL   +E A+   ++ +LY   G S                      I+L TDAC + E DDK+  + D ++   ++ +K +KY +A   ++       K    +   K+ LS I + L  +D   ++K Y       +F
Sbjct:   17 MKEGDKLSKTNIFRWKADWDSAALAYEKAANAFRSAKIYDSAKYCFLRLSLCQTHMDVYYLAAKSMENASAMAKELKETQECANLLLESCKLYRTNGNSFQAADTMTKAAKLLEDIDLNQTIKLLTDACELFELDDKDHFSGDTFKQTISMLLKHKKYTEAVDLMILQNRVFVKLEQNHDLHKSCLSVITISLATDDIVASKKYYEQFLDYPSF 230          
BLAST of CK933426 vs. ExPASy Swiss-Prot
Match: SNAG_BOVIN (Gamma-soluble NSF attachment protein OS=Bos taurus GN=NAPG PE=1 SV=3)

HSP 1 Score: 88.5817 bits (218), Expect = 5.069e-17
Identity = 58/225 (25.78%), Postives = 101/225 (44.89%), Query Frame = 1
Query:   82 AAMASSDPHKLMVKADKLTKLSLTRWSADWKSATQLYEQAANGFRVAKNIEQAKIAFEKASQGQEMLSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPXXXXXXXXXXXXXXXVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAF 756
            AA   ++  + + KA+K  K    +W  D+ SA   Y +AA  F+ AK  EQAK A  K +   E   + + AAK  E A  + KE+    E      KAS +Y E G                    PE A+QLY     + E +++ + A +L   A+ + ++  ++ +AA  + +      +     +  K  ++ ++V+L+ ND+  AE+C  +   +  F
Sbjct:    2 AAQKINEGLEHLAKAEKYLKTGFLKWKPDYDSAASEYGKAAVAFKNAKQFEQAKDACLKEAVAHENNRALFHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPEKAVQLYQQTANVFENEERLRQAVELLGKASRLLVRGRRFDEAAISIQKEKNIYKEIENYPTCYKKTIAQVLVHLHRNDYVAAERCVRESYSIPGF 226          
BLAST of CK933426 vs. ExPASy Swiss-Prot
Match: SNAG_MOUSE (Gamma-soluble NSF attachment protein OS=Mus musculus GN=Napg PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.129e-16
Identity = 57/225 (25.33%), Postives = 101/225 (44.89%), Query Frame = 1
Query:   82 AAMASSDPHKLMVKADKLTKLSLTRWSADWKSATQLYEQAANGFRVAKNIEQAKIAFEKASQGQEMLSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPXXXXXXXXXXXXXXXVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAF 756
            AA   ++  + + KA+K  K    +W  D+ SA   Y +AA  F+ AK  EQAK A  + +   E   + + AAK  E A  + KE+    E      KAS +Y E G                    PE A+QLY     + E +++ + A +L   A+ + ++  ++ +AA  + +      +     +  K  ++ ++V+L+ ND+  AE+C  +   +  F
Sbjct:    2 AAQKINEGLEHLAKAEKYLKTGFLKWKPDYDSAASEYGKAAVAFKNAKQFEQAKDACLREAVAHENNRALFHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPEKAVQLYQQTANVFENEERLRQAVELLGKASRLLVRGRRFDEAALSIQKEKNIYKEIENYPTCYKKTIAQVLVHLHRNDYVAAERCVRESYSIPGF 226          
BLAST of CK933426 vs. ExPASy Swiss-Prot
Match: SNAG_HUMAN (Gamma-soluble NSF attachment protein OS=Homo sapiens GN=NAPG PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.129e-16
Identity = 57/225 (25.33%), Postives = 101/225 (44.89%), Query Frame = 1
Query:   82 AAMASSDPHKLMVKADKLTKLSLTRWSADWKSATQLYEQAANGFRVAKNIEQAKIAFEKASQGQEMLSSPWDAAKHMESAAALAKELHNWREVADFYRKASELYNECGRSQPXXXXXXXXXXXXXXXVPEDAIQLYTDACIMLEEDDKEQMAFDLYRAATNVYIKLEKYADAATFLLRWGLAADKCNATNSQCKAYLSAIIVYLYANDFKQAEKCYNDCSQVDAF 756
            AA   ++  + + KA+K  K    +W  D+ SA   Y +AA  F+ AK  EQAK A  + +   E   + + AAK  E A  + KE+    E      KAS +Y E G                    PE A+QLY     + E +++ + A +L   A+ + ++  ++ +AA  + +      +     +  K  ++ ++V+L+ ND+  AE+C  +   +  F
Sbjct:    2 AAQKINEGLEHLAKAEKYLKTGFLKWKPDYDSAASEYGKAAVAFKNAKQFEQAKDACLREAVAHENNRALFHAAKAYEQAGMMLKEMQKLPEAVQLIEKASMMYLENGTPDTAAMALERAGKLIENVDPEKAVQLYQQTANVFENEERLRQAVELLGKASRLLVRGRRFDEAALSIQKEKNIYKEIENYPTCYKKTIAQVLVHLHRNDYVAAERCVRESYSIPGF 226          
The following BLAST results are available for this feature:
BLAST of CK933426 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
SNAG_ARATH5.506e-10171.75Gamma-soluble NSF attachment protein OS=Arabidopsi... [more]
SNAG_DICDI1.246e-2331.78Gamma-soluble NSF attachment protein OS=Dictyostel... [more]
SNAG_BOVIN5.069e-1725.78Gamma-soluble NSF attachment protein OS=Bos taurus... [more]
SNAG_MOUSE1.129e-1625.33Gamma-soluble NSF attachment protein OS=Mus muscul... [more]
SNAG_HUMAN1.129e-1625.33Gamma-soluble NSF attachment protein OS=Homo sapie... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004285_G08 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0003_IVF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933426 ID=CK933426; Name=CK933426; organism=Citrus sinensis; type=EST; length=871bp
GGGGCAGCAGAGTCAAGTGCCGTGTATGTGATTGAATTGCGCGGAAATCT
GAGAAACAGGTGGACTGTTGGTTCGAAGTGAGCTGCGATGGCGAGTTCCG
ATCCTCACAAGTTGATGGTCAAAGCCGACAAATTAACAAAACTCAGTCTT
ACCAGATGGAGTGCTGATTGGAAAAGTGCTACTCAATTGTATGAACAAGC
TGCTAATGGTTTCAGGGTTGCCAAAAATATTGAGCAAGCAAAAATTGCAT
TTGAGAAAGCTTCGCAAGGACAAGAGATGCTCTCCTCACCATGGGATGCG
GCTAAGCACATGGAGTCTGCTGCTGCTTTAGCTAAGGAACTACATAATTG
GAGGGAGGTTGCTGACTTTTATAGAAAAGCATCAGAGTTGTACAATGAAT
GTGGGAGATCACAACCTGCCTCAGATGCTCTAGCAAAGGCTGCTCGTGCA
TTGGAAGATGCCGTGCCAGAGGATGCTATTCAACTCTATACTGATGCATG
CATAATGCTTGAAGAGGATGACAAGGAACAAATGGCCTTTGATCTATATC
GTGCCGCCACTAATGTTTATATAAAGCTTGAGAAGTATGCTGATGCTGCC
ACTTTTCTGTTGAGATGGGGTTTGGCAGCTGATAAGTGCAATGCTACCAA
CAGCCAGTGCAAGGCATATCTTAGTGCAATTATTGTGTATCTTTATGCTA
ATGACTTCAAGCAAGCAGAGAAATGCTACAATGACTGTTCCCAGGTTGAT
GCTTTTTTTGAGAAGTGACCAGAATCGCTGTGCTACTAAACTTATTTCTG
CCTACACTGAAGGTGACGTTGAAGAAATTAAGCGTGTGGCTCNNNNNNGC
ACTATTTCAAATCTTGATCAT
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