CK933431
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933431 vs. ExPASy Swiss-Prot
Match: ZDS_CAPAN (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum GN=ZDS PE=1 SV=1) HSP 1 Score: 211.075 bits (536), Expect = 4.946e-54 Identity = 108/143 (75.52%), Postives = 121/143 (84.62%), Query Frame = 2 Query: 8 EGQGSLLQCVLTPGNPYMPLPNDEIIRRVARQVLALFPLPQGLGVIWSSFVKIAQSLYRGGPGKVPLRTDQKTPVKNLFLAGSYTKQDYIDSMEGPTLSDRQASAYICNAGEELVALRKQLAAFESQEQMEAPTTTNDELSLV 436 EGQGSLLQCVLTPG+PYMPLPN+EIIRRV++QVLALFP QGL V WSS VKI QSLYR GPGK P R DQKTPV+N FLAGSYTKQDYIDSMEG TLS RQASAYIC+AGE+L+ALRK++AA E E + + +DELSLV Sbjct: 447 EGQGSLLQCVLTPGDPYMPLPNEEIIRRVSKQVLALFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATLSGRQASAYICDAGEQLLALRKKIAAAELNE-ISKGVSLSDELSLV 588
BLAST of CK933431 vs. ExPASy Swiss-Prot
Match: ZDS_TARER (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Tagetes erecta PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 1.879e-53 Identity = 108/143 (75.52%), Postives = 118/143 (82.52%), Query Frame = 2 Query: 8 EGQGSLLQCVLTPGNPYMPLPNDEIIRRVARQVLALFPLPQGLGVIWSSFVKIAQSLYRGGPGKVPLRTDQKTPVKNLFLAGSYTKQDYIDSMEGPTLSDRQASAYICNAGEELVALRKQLAAFESQEQMEAPTTTNDELSLV 436 EGQGSLLQCVLTPG+PYMPLPN+EII RV++QVLALFP QGL V WSS VKI QSLYR GPGK P R DQKTPVKN FLAGSYTKQDYIDSMEG TLS RQASA+IC+AGEEL ALRKQLAA +S + + DE+SLV Sbjct: 450 EGQGSLLQCVLTPGDPYMPLPNEEIISRVSKQVLALFPSSQGLEVTWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQASAFICDAGEELAALRKQLAAIQSIDSIGV-----DEMSLV 587
BLAST of CK933431 vs. ExPASy Swiss-Prot
Match: ZDS_SOLLC (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Solanum lycopersicum GN=ZDS PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.629e-52 Identity = 104/143 (72.73%), Postives = 117/143 (81.82%), Query Frame = 2 Query: 8 EGQGSLLQCVLTPGNPYMPLPNDEIIRRVARQVLALFPLPQGLGVIWSSFVKIAQSLYRGGPGKVPLRTDQKTPVKNLFLAGSYTKQDYIDSMEGPTLSDRQASAYICNAGEELVALRKQLAAFESQEQMEAPTTTNDELSLV 436 EGQGSLLQCVLTPG+PYMPL NDEII+RV +QVLALFP QGL V WSS +KI QSLYR GPGK P R DQKTPV+N FLAGSYTKQDYIDSMEG TLS RQASAYICN GE+L+ALRK++ A E + + + +DELSLV Sbjct: 447 EGQGSLLQCVLTPGDPYMPLSNDEIIKRVTKQVLALFPSSQGLEVTWSSVLKIGQSLYREGPGKDPFRPDQKTPVENFFLAGSYTKQDYIDSMEGATLSGRQASAYICNVGEQLMALRKKITAAELND-ISKGVSLSDELSLV 588
BLAST of CK933431 vs. ExPASy Swiss-Prot
Match: ZDS_NARPS (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Narcissus pseudonarcissus GN=ZDS1 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 4.629e-52 Identity = 102/143 (71.33%), Postives = 116/143 (81.12%), Query Frame = 2 Query: 8 EGQGSLLQCVLTPGNPYMPLPNDEIIRRVARQVLALFPLPQGLGVIWSSFVKIAQSLYRGGPGKVPLRTDQKTPVKNLFLAGSYTKQDYIDSMEGPTLSDRQASAYICNAGEELVALRKQLAAFESQEQMEAPTTTNDELSLV 436 EGQGSL+Q VLTPG+PYMPLPND II RV +QVL LFP QGL V+WSS VKI QSLYR GPGK P R DQKTPVKN FLAGSYTKQDYIDSMEG TLS RQA+AYIC+AGE+L ALRK++AA ++ + + +DELSLV Sbjct: 432 EGQGSLIQAVLTPGDPYMPLPNDAIIERVRKQVLDLFPSSQGLEVLWSSVVKIGQSLYREGPGKDPFRPDQKTPVKNFFLAGSYTKQDYIDSMEGATLSGRQAAAYICSAGEDLAALRKKIAADHPEQLINKDSNVSDELSLV 574
BLAST of CK933431 vs. ExPASy Swiss-Prot
Match: ZDS_ARATH (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=ZDS1 PE=2 SV=3) HSP 1 Score: 188.348 bits (477), Expect = 3.433e-47 Identity = 97/143 (67.83%), Postives = 110/143 (76.92%), Query Frame = 2 Query: 8 EGQGSLLQCVLTPGNPYMPLPNDEIIRRVARQVLALFPLPQGLGVIWSSFVKIAQSLYRGGPGKVPLRTDQKTPVKNLFLAGSYTKQDYIDSMEGPTLSDRQASAYICNAGEELVALRKQLAAFESQEQMEAPTTTNDELSLV 436 EGQG+LLQCVLTPG+PYM +PND+II +VA QV LFP +GL V WSS VKIAQSLYR PGK P R DQKTP+KN FLAGSYTKQDYIDSMEG TLS RQAS+YIC+AGEEL L K+L++ + T DELSLV Sbjct: 424 EGQGTLLQCVLTPGDPYMRMPNDKIIEKVAMQVTELFPSSRGLEVTWSSVVKIAQSLYREAPGKDPFRPDQKTPIKNFFLAGSYTKQDYIDSMEGATLSGRQASSYICDAGEELAELNKKLSS--------SATAVPDELSLV 558
BLAST of CK933431 vs. ExPASy Swiss-Prot
Match: ZDS_MAIZE (Zeta-carotene desaturase, chloroplastic/chromoplastic OS=Zea mays GN=ZDS1 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.460e-45 Identity = 89/130 (68.46%), Postives = 104/130 (80.00%), Query Frame = 2 Query: 8 EGQGSLLQCVLTPGNPYMPLPNDEIIRRVARQVLALFPLPQGLGVIWSSFVKIAQSLYRGGPGKVPLRTDQKTPVKNLFLAGSYTKQDYIDSMEGPTLSDRQASAYICNAGEELVALRKQLAAFESQEQM 397 EGQGSL+Q VLTPG+PYMPLPN+EII +V +QV+ LFP +GL V WSS VKI QSLYR PG P R DQKTPVKN FL+GSYTKQDYIDSMEG TLS R+ SAYIC AGEEL+ALRK+L + ++ + Sbjct: 432 EGQGSLIQAVLTPGDPYMPLPNEEIISKVQKQVVELFPSSRGLEVTWSSVVKIGQSLYREAPGNDPFRPDQKTPVKNFFLSGSYTKQDYIDSMEGATLSGRRTSAYICGAGEELLALRKKLLIDDGEKAL 561
BLAST of CK933431 vs. ExPASy Swiss-Prot
Match: ZDS_SYNY3 (Zeta-carotene desaturase OS=Synechocystis sp. (strain PCC 6803) GN=crtQ PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.771e-27 Identity = 63/106 (59.43%), Postives = 74/106 (69.81%), Query Frame = 2 Query: 11 GQGSLLQCVLTPGNPYMPLPNDEIIRRVARQVLALFPLPQGLGVIWSSFVKIAQSLYRGGPGKVPLRTDQKTPVKNLFLAGSYTKQDYIDSMEGPTLSDRQASAYI 328 G+GSLLQ VLTPG+P+M N+ I RV +QV ALFP L + W S +K+AQSLYR PG R Q TP+ N FLAGSYT+QDYIDSMEG TLS RQA+ I Sbjct: 369 GEGSLLQLVLTPGDPFMKESNEAIAYRVLKQVKALFPSAADLNMTWYSVIKLAQSLYREAPGMDLFRPSQATPIANFFLAGSYTQQDYIDSMEGATLSGRQAAQAI 474
BLAST of CK933431 vs. ExPASy Swiss-Prot
Match: ZDS_ANASP (Zeta-carotene desaturase OS=Anabaena sp. (strain PCC 7120) GN=crtQ PE=3 SV=2) HSP 1 Score: 122.094 bits (305), Expect = 3.021e-27 Identity = 61/107 (57.01%), Postives = 77/107 (71.96%), Query Frame = 2 Query: 8 EGQGSLLQCVLTPGNPYMPLPNDEIIRRVARQVLALFPLPQGLGVIWSSFVKIAQSLYRGGPGKVPLRTDQKTPVKNLFLAGSYTKQDYIDSMEGPTLSDRQASAYI 328 +GQGSLLQ VLTPG+P++ N+ I + V +QV LFP + L + W S VK+AQSLYR PG R +QKTP+ N FLAGSYT+QDYIDSMEG T+S R+A+ I Sbjct: 367 QGQGSLLQLVLTPGDPFIKESNEAIAQHVLKQVYELFPSSRELNMTWYSVVKLAQSLYREAPGMDVYRPNQKTPIANFFLAGSYTQQDYIDSMEGATVSGRRAAKVI 473
BLAST of CK933431 vs. ExPASy Swiss-Prot
Match: CRTI_SYNY3 (Phytoene dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=pds PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.762e-11 Identity = 37/107 (34.58%), Postives = 58/107 (54.21%), Query Frame = 2 Query: 20 SLLQCVLTPGNPYMPLPNDEIIRRVARQVLALFPL----PQGLGVIWSSFVKIAQSLYRGGPGKVPLRTDQKTPVKNLFLAGSYTKQDYIDSMEGPTLSDRQASAYI 328 S+L+ VL P ++ ++EI+ ++ LFP ++ S VK +S+Y+ PG+ R DQ+T V N +LAG +T Q Y+ SMEG LS +Q + I Sbjct: 347 SMLELVLAPAQDWIGKSDEEIVAATMAEIKQLFPQHFNGDNPARLLKSHVVKTPRSVYKATPGRQACRPDQRTSVPNFYLAGDFTMQKYLGSMEGAVLSGKQCAQAI 453 The following BLAST results are available for this feature:
BLAST of CK933431 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933431 ID=CK933431; Name=CK933431; organism=Citrus sinensis; type=EST; length=723bpback to top |