CK933432

Overview
NameCK933432
Unique NameCK933432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length407
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK933432 vs. ExPASy Swiss-Prot
Match: XTH9_ARATH (Xyloglucan endotransglucosylase/hydrolase protein 9 OS=Arabidopsis thaliana GN=XTH9 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 3.616e-21
Identity = 39/59 (66.10%), Postives = 50/59 (84.75%), Query Frame = 2 
Query:   11 KCSSSAEKRFWWDEPTLSELNVHQSHQLMWVRANHLIYDYCTDTSRFPAIPTECVHHRH 187
            KC+   +++FWWDEPT+SEL++HQ+HQL+WVRANH+IYDYC D +RFP  P EC HHRH
Sbjct:  233 KCNG--DQKFWWDEPTVSELSLHQNHQLIWVRANHMIYDYCFDATRFPVTPLECQHHRH 289
The following BLAST results are available for this feature:
BLAST of CK933432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
XTH9_ARATH3.616e-2166.10Xyloglucan endotransglucosylase/hydrolase protein ... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004285_F07 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0003_IVF_F07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933432 ID=CK933432; Name=CK933432; organism=Citrus sinensis; type=EST; length=407bp
GGGTGCCAAAAAATGCAGCAGCAGTGCTGAGAAAAGGTTCTGGTGGGATG
AGCCAACATTGTCTGAGCTCAATGTGCACCAAAGCCACCAGCTCATGTGG
GTTAGAGCCAATCACCTCATCTATGACTATTGCACTGACACGTCTAGGTT
CCCAGCTATTCCCACCGAGTGCGTGCACCACCGCCACTAGCCATGAATGA
TTGTGAATGACTGAAGGAAAAAGGATTTGCGTTTCTTATGTAAAAAAGTT
GAAAAAAAAAGGGCGGGGTGGAAAAAGATCGATCATAACATGTACTCCAT
GTTGTTTTGTTCATGTTGTTTTGTTCATTCTGGTTGTAGATTGTTTGATA
TTATTAATATGATCTTGGATTTCTATTCAAAAAAAAAAAAAAAAAAAAAA
AAAAAAA
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