CK933453
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933453 vs. ExPASy Swiss-Prot
Match: RS7_HORVU (40S ribosomal protein S7 OS=Hordeum vulgare GN=RPS7 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.983e-23 Identity = 48/59 (81.36%), Postives = 56/59 (94.92%), Query Frame = 2 Query: 5 YPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 181 YPAEIVGKRVRYRLDG+K+IKI+LDPKERNNTEYKLE+FS VYR+L GKDVVF+YP+ + Sbjct: 131 YPAEIVGKRVRYRLDGAKVIKIYLDPKERNNTEYKLETFSAVYRRLCGKDVVFEYPVAE 189
BLAST of CK933453 vs. ExPASy Swiss-Prot
Match: RS7_ORYSJ (40S ribosomal protein S7 OS=Oryza sativa subsp. japonica GN=RPS7 PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 3.383e-23 Identity = 49/59 (83.05%), Postives = 55/59 (93.22%), Query Frame = 2 Query: 5 YPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 181 YPAEIVGKRVRY LDG KI+KIFLDPKERNNTEYKL++FS VYR+L GKDVVFDYP+T+ Sbjct: 132 YPAEIVGKRVRYHLDGRKIMKIFLDPKERNNTEYKLDTFSSVYRRLCGKDVVFDYPMTE 190
BLAST of CK933453 vs. ExPASy Swiss-Prot
Match: RS71_ARATH (40S ribosomal protein S7-1 OS=Arabidopsis thaliana GN=RPS7A PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 3.383e-23 Identity = 48/59 (81.36%), Postives = 57/59 (96.61%), Query Frame = 2 Query: 8 PAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITDA 184 PAEIVGKR RYRLDG+KI+K+FLDPKERNNTEYK+E+FS VY+KLTGKDVVF++PIT+A Sbjct: 133 PAEIVGKRTRYRLDGTKIMKVFLDPKERNNTEYKVEAFSAVYKKLTGKDVVFEFPITEA 191
BLAST of CK933453 vs. ExPASy Swiss-Prot
Match: RS7_BRAOL (40S ribosomal protein S7 OS=Brassica oleracea GN=RPS7 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 1.285e-22 Identity = 46/59 (77.97%), Postives = 55/59 (93.22%), Query Frame = 2 Query: 5 YPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 181 YPAEIVGKR RYR+DG+KI+K++L+PKERNNTEYKLE+ GVYRKLTGKDVVF+YP+ D Sbjct: 132 YPAEIVGKRTRYRVDGTKIMKVYLEPKERNNTEYKLETMVGVYRKLTGKDVVFEYPVAD 190
BLAST of CK933453 vs. ExPASy Swiss-Prot
Match: RS7_SECCE (40S ribosomal protein S7 OS=Secale cereale GN=RPS7 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 1.679e-22 Identity = 47/59 (79.66%), Postives = 55/59 (93.22%), Query Frame = 2 Query: 5 YPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 181 YPAEIVGKRVRYRLDGSKIIKIFLDP ERNNTEYKL++F+ VYR+L GKDVV++YP+ + Sbjct: 132 YPAEIVGKRVRYRLDGSKIIKIFLDPMERNNTEYKLDTFTAVYRRLCGKDVVYEYPVAE 190
BLAST of CK933453 vs. ExPASy Swiss-Prot
Match: RS7_AVIMR (40S ribosomal protein S7 OS=Avicennia marina GN=RPS7 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 4.885e-22 Identity = 46/59 (77.97%), Postives = 57/59 (96.61%), Query Frame = 2 Query: 5 YPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITD 181 YPAEIVGKRVRYRLDGSKI+K+FLDPK +N+TE KLE+F+GVYRKL+GKDVVF++P+T+ Sbjct: 132 YPAEIVGKRVRYRLDGSKIMKVFLDPKAKNDTENKLETFAGVYRKLSGKDVVFEFPLTE 190
BLAST of CK933453 vs. ExPASy Swiss-Prot
Match: RS73_ARATH (40S ribosomal protein S7-3 OS=Arabidopsis thaliana GN=RPS7C PE=2 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 1.088e-21 Identity = 46/57 (80.70%), Postives = 53/57 (92.98%), Query Frame = 2 Query: 5 YPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPI 175 +PAEIVGKR RYRLDGSKI+K+FLD KE+NNTEYKLE+ GVYRKLTGKDVVF+YP+ Sbjct: 132 FPAEIVGKRTRYRLDGSKIMKVFLDAKEKNNTEYKLETMVGVYRKLTGKDVVFEYPV 188
BLAST of CK933453 vs. ExPASy Swiss-Prot
Match: RS72_ARATH (40S ribosomal protein S7-2 OS=Arabidopsis thaliana GN=RPS7B PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 7.054e-21 Identity = 45/60 (75.00%), Postives = 54/60 (90.00%), Query Frame = 2 Query: 5 YPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYPITDA 184 YPAEIVGKR RYRLDG+KI+K+FLD K +N+TEYKLE+ GVYRKLTGKDVVF+YP+ +A Sbjct: 132 YPAEIVGKRTRYRLDGTKIMKVFLDSKLKNDTEYKLETMVGVYRKLTGKDVVFEYPVIEA 191
BLAST of CK933453 vs. ExPASy Swiss-Prot
Match: RS7_XENLA (40S ribosomal protein S7 OS=Xenopus laevis GN=rps7 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 4.731e-17 Identity = 36/56 (64.29%), Postives = 51/56 (91.07%), Query Frame = 2 Query: 5 YPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 172 YP+EIVG+R+R +LDGS++IK+ LD ++NN E+K+E+FSGVY+KLTGKDVVF++P Sbjct: 135 YPSEIVGRRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKDVVFEFP 190
BLAST of CK933453 vs. ExPASy Swiss-Prot
Match: RS7_ICTPU (40S ribosomal protein S7 OS=Ictalurus punctatus GN=rps7 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 2.348e-16 Identity = 35/56 (62.50%), Postives = 50/56 (89.29%), Query Frame = 2 Query: 5 YPAEIVGKRVRYRLDGSKIIKIFLDPKERNNTEYKLESFSGVYRKLTGKDVVFDYP 172 YP+EIVGKR+R +LD S++IK+ LD ++NN E+K+E+F+GVY+KLTGKDVVF++P Sbjct: 135 YPSEIVGKRIRVKLDSSRLIKVHLDKAQQNNVEHKVETFAGVYKKLTGKDVVFEFP 190 The following BLAST results are available for this feature:
BLAST of CK933453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933453 ID=CK933453; Name=CK933453; organism=Citrus sinensis; type=EST; length=443bpback to top |