CK933456
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK933456 vs. ExPASy Swiss-Prot
Match: RL31_PERFR (60S ribosomal protein L31 OS=Perilla frutescens GN=RPL31 PE=2 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.247e-43 Identity = 89/121 (73.55%), Postives = 95/121 (78.51%), Query Frame = 2 Query: 62 MVEKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 424 M +K K RKEEVV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNK +WS ND+EDAKEE YSLVTVAEIP GLKGLGT+VIDEE+ Sbjct: 1 MADKGSKPRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEEE 121
BLAST of CK933456 vs. ExPASy Swiss-Prot
Match: RL313_ARATH (60S ribosomal protein L31-3 OS=Arabidopsis thaliana GN=RPL31C PE=2 SV=2) HSP 1 Score: 172.94 bits (437), Expect = 1.056e-42 Identity = 86/115 (74.78%), Postives = 93/115 (80.87%), Query Frame = 2 Query: 80 KGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 424 KGRKEEV+TREYTINLH+RLH CTFKKKAPKAIKEIRKFA+KAMGT DVRVDVKLNKQ+WS ND+EDAKEEF+SLVTVAEIP EGL GLGTKVI+EED Sbjct: 5 KGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119
BLAST of CK933456 vs. ExPASy Swiss-Prot
Match: RL31_PICMA (60S ribosomal protein L31 OS=Picea mariana GN=RPL31 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 1.379e-42 Identity = 86/121 (71.07%), Postives = 95/121 (78.51%), Query Frame = 2 Query: 62 MVEKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 424 MVEK GK R+ EV TREYTINLH+RLHGCTFKK APKA+KEIRKFAQKAMGTTDVR+DVKLNK VWS NDEEDAK+E YS+VTVAE+PPEGL GLGTK+I+EED Sbjct: 1 MVEK-GKSRRNEVATREYTINLHRRLHGCTFKKMAPKAVKEIRKFAQKAMGTTDVRLDVKLNKAVWSRGIRSVPRRMRVRISRKRNDEEDAKDELYSIVTVAEVPPEGLTGLGTKIIEEED 120
BLAST of CK933456 vs. ExPASy Swiss-Prot
Match: RL31_NICGU (60S ribosomal protein L31 OS=Nicotiana glutinosa GN=RPL31 PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 1.800e-42 Identity = 86/115 (74.78%), Postives = 92/115 (80.00%), Query Frame = 2 Query: 80 KGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 424 KGRKEEVVTREYTINLHKRLH CTFKKKAP AIKEIRKFAQKAMGT DVRVDVKLNKQ+WS ND+EDAKEE YSLVTVAEIP +GLKGLGTK+I++ED Sbjct: 6 KGRKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDED 120
BLAST of CK933456 vs. ExPASy Swiss-Prot
Match: RL312_ARATH (60S ribosomal protein L31-2 OS=Arabidopsis thaliana GN=RPL31B PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 2.352e-42 Identity = 85/115 (73.91%), Postives = 92/115 (80.00%), Query Frame = 2 Query: 80 KGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 424 KGRKEEVVTREYTINLH+RLH CTFKKKAPKAIKEIRKFA+K MGT DVRVDVKLNKQ+WS ND+EDAKEEF+SLVTVAEIP EGL GLGTK+I+EED Sbjct: 5 KGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119
BLAST of CK933456 vs. ExPASy Swiss-Prot
Match: RL311_ARATH (60S ribosomal protein L31-1 OS=Arabidopsis thaliana GN=RPL31A PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 3.071e-42 Identity = 86/116 (74.14%), Postives = 92/116 (79.31%), Query Frame = 2 Query: 77 GKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 424 GKGRKEEVVTREYTINLH+RLH CTFKKKAP AIKEIRKFA KAMGT DVRVDVKLNKQ+WS ND+EDAKEEF+SLVTVAEIP EGL GLGTKVI+EE+ Sbjct: 4 GKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119
BLAST of CK933456 vs. ExPASy Swiss-Prot
Match: RL31_PANGI (60S ribosomal protein L31 OS=Panax ginseng GN=RPL31 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 3.396e-41 Identity = 87/121 (71.90%), Postives = 94/121 (77.69%), Query Frame = 2 Query: 62 MVEKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEED 424 MVEK KGRKEEVVTREYTINLHKRLHGCTFKKKAP AIKEIRKFAQKAMGT DVRVDVKLNKQ+WS ND+EDAKEE YSLVTVA+IP LKGLG ++I+E+D Sbjct: 1 MVEKT-KGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKLNKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD 120
BLAST of CK933456 vs. ExPASy Swiss-Prot
Match: RL31_CYAPA (60S ribosomal protein L31 OS=Cyanophora paradoxa GN=RPL31 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 1.636e-27 Identity = 63/114 (55.26%), Postives = 76/114 (66.67%), Query Frame = 2 Query: 80 KGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDEE 421 K R E+VTREYTINLHKRLHG FKK+AP+A+KEI+KFA K MGTTDVRVD +LNK VW+ ND+EDAKE+ Y+LVT +P KGL T+ +D E Sbjct: 8 KSRAAEIVTREYTINLHKRLHGVGFKKRAPRAVKEIKKFASKIMGTTDVRVDPRLNKFVWNQGIRSVPYRVRVRLARKRNDDEDAKEKLYTLVTY--VPVTSFKGLQTQNVDAE 119
BLAST of CK933456 vs. ExPASy Swiss-Prot
Match: RL31_CHLRE (60S ribosomal protein L31 OS=Chlamydomonas reinhardtii GN=RPL31 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.760e-27 Identity = 65/113 (57.52%), Postives = 75/113 (66.37%), Query Frame = 2 Query: 80 KGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVIDE 418 K R +E VTREYTI+L KRLH +FKK APKA+KEIRKFA K MGT+DVR+DVKLNK VWS ND+EDAKEE YS VTVAE + KG GT V+ + Sbjct: 5 KSRSKEQVTREYTIHLSKRLHKTSFKKCAPKAVKEIRKFASKVMGTSDVRLDVKLNKAVWSKGIKNVPTRLRIVISRRRNDDEDAKEEMYSFVTVAE--DQSTKGKGTVVVQD 115
BLAST of CK933456 vs. ExPASy Swiss-Prot
Match: RL31_SPOFR (60S ribosomal protein L31 OS=Spodoptera frugiperda GN=RpL31 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 5.263e-26 Identity = 60/116 (51.72%), Postives = 76/116 (65.52%), Query Frame = 2 Query: 68 EKAGKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKQVWSXXXXXXXXXXXXXXXXXXNDEEDAKEEFYSLVTVAEIPPEGLKGLGTKVID 415 E+ GK EVVTREYT+NLHKRLHG FKK+AP+AIKEIRKFA+K MGT DVRVD +LNK +WS ND+ED+ + ++LVT +P +KGL T+ +D Sbjct: 7 ERKGKSAINEVVTREYTVNLHKRLHGVGFKKRAPRAIKEIRKFAEKQMGTPDVRVDTRLNKFLWSKGVRNVPFRVRVRLSRRRNDDEDSAHKLFTLVTY--VPVASIKGLQTENVD 120 The following BLAST results are available for this feature:
BLAST of CK933456 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933456 ID=CK933456; Name=CK933456; organism=Citrus sinensis; type=EST; length=599bpback to top |