CK933463

Overview
NameCK933463
Unique NameCK933463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK933463 vs. ExPASy Swiss-Prot
Match: ARL8B_RAT (ADP-ribosylation factor-like protein 8B OS=Rattus norvegicus GN=Arl8b PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.880e-59
Identity = 107/175 (61.14%), Postives = 130/175 (74.29%), Query Frame = 3 
Query:  120 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRXXXXXXXXXXXXXXXNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 644
            + L    L+W RSLF+K+EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPRFRSMWERYCR                +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:    2 LALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQW 176
[Close]
BLAST of CK933463 vs. ExPASy Swiss-Prot
Match: ARL8B_PONAB (ADP-ribosylation factor-like protein 8B OS=Pongo abelii GN=ARL8B PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.880e-59
Identity = 107/175 (61.14%), Postives = 130/175 (74.29%), Query Frame = 3 
Query:  120 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRXXXXXXXXXXXXXXXNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 644
            + L    L+W RSLF+K+EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPRFRSMWERYCR                +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:    2 LALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAAYREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQW 176
[Close]
BLAST of CK933463 vs. ExPASy Swiss-Prot
Match: ARL8B_MOUSE (ADP-ribosylation factor-like protein 8B OS=Mus musculus GN=Arl8b PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.880e-59
Identity = 107/175 (61.14%), Postives = 130/175 (74.29%), Query Frame = 3 
Query:  120 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRXXXXXXXXXXXXXXXNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 644
            + L    L+W RSLF+K+EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPRFRSMWERYCR                +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:    2 LALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQW 176
[Close]
BLAST of CK933463 vs. ExPASy Swiss-Prot
Match: ARL8B_HUMAN (ADP-ribosylation factor-like protein 8B OS=Homo sapiens GN=ARL8B PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.880e-59
Identity = 107/175 (61.14%), Postives = 130/175 (74.29%), Query Frame = 3 
Query:  120 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRXXXXXXXXXXXXXXXNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 644
            + L    L+W RSLF+K+EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPRFRSMWERYCR                +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:    2 LALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQW 176
[Close]
BLAST of CK933463 vs. ExPASy Swiss-Prot
Match: ARL8B_MACFA (ADP-ribosylation factor-like protein 8B OS=Macaca fascicularis GN=ARL8B PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 8.643e-59
Identity = 106/175 (60.57%), Postives = 130/175 (74.29%), Query Frame = 3 
Query:  120 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRXXXXXXXXXXXXXXXNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 644
            + L    L+W RSLF+K+EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPR+RSMWERYCR                +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:    2 LALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRYRSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQW 176
[Close]
BLAST of CK933463 vs. ExPASy Swiss-Prot
Match: ARL8B_BOVIN (ADP-ribosylation factor-like protein 8B OS=Bos taurus GN=ARL8B PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.129e-58
Identity = 106/175 (60.57%), Postives = 130/175 (74.29%), Query Frame = 3 
Query:  120 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRXXXXXXXXXXXXXXXNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 644
            + L    L+W RSLF+K+EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPRF+SMWERYCR                +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:    2 LALISRLLDWFRSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFQSMWERYCRGVNAIVYMIDAADREKIEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQW 176
[Close]
BLAST of CK933463 vs. ExPASy Swiss-Prot
Match: ARL8A_CHICK (ADP-ribosylation factor-like protein 8A OS=Gallus gallus GN=ARL8A PE=2 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 1.129e-58
Identity = 104/175 (59.43%), Postives = 132/175 (75.43%), Query Frame = 3 
Query:  120 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRXXXXXXXXXXXXXXXNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 644
            + L+   L+W R+LF+K+EMEL+L+GLQ +GKT+ VNVIA+G ++EDMIPTVGFNMRK+TKGNVTIKLWD+GGQPRFRSMWERYCR                +  S++ELH+LL KP L GIP+LVLGNK D P AL +++L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:    2 LALFNKLLDWFRALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQW 176
[Close]
BLAST of CK933463 vs. ExPASy Swiss-Prot
Match: AR8BA_DANRE (ADP-ribosylation factor-like protein 8B-A OS=Danio rerio GN=arl8ba PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.474e-58
Identity = 106/175 (60.57%), Postives = 130/175 (74.29%), Query Frame = 3 
Query:  120 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRXXXXXXXXXXXXXXXNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 644
            + L    L+W +SLF+K+EMEL+L+GLQ +GKT+ VNVIA+G +SEDMIPTVGFNMRKVTKGNVTIK+WD+GGQPRFRSMWERYCR                +  SR+ELH+LL KP L GIP+LVLGNK D P AL ++ L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:    2 LALINRLLDWFKSLFWKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVTKGNVTIKIWDIGGQPRFRSMWERYCRGVNAIVYMVDAADREKVEASRNELHNLLDKPQLQGIPVLVLGNKRDLPNALDEKQLIEKMNLAAIQDREICCYSISCKEKDNIDITLQW 176
[Close]
BLAST of CK933463 vs. ExPASy Swiss-Prot
Match: ARL8A_HUMAN (ADP-ribosylation factor-like protein 8A OS=Homo sapiens GN=ARL8A PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.284e-58
Identity = 103/175 (58.86%), Postives = 132/175 (75.43%), Query Frame = 3 
Query:  120 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRXXXXXXXXXXXXXXXNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 644
            + L+   L+W ++LF+K+EMEL+L+GLQ +GKT+ VNVIA+G ++EDMIPTVGFNMRK+TKGNVTIKLWD+GGQPRFRSMWERYCR                +  S++ELH+LL KP L GIP+LVLGNK D P AL +++L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:    2 IALFNKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQGIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQW 176
[Close]
BLAST of CK933463 vs. ExPASy Swiss-Prot
Match: ARL8A_XENTR (ADP-ribosylation factor-like protein 8A OS=Xenopus tropicalis GN=arl8a PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 2.780e-57
Identity = 102/175 (58.29%), Postives = 131/175 (74.86%), Query Frame = 3 
Query:  120 MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVTKGNVTIKLWDLGGQPRFRSMWERYCRXXXXXXXXXXXXXXXNLPVSRSELHDLLSKPSLNGIPLLVLGNKIDKPEALSKEDLMEQMGLKSITDREVCCYMISCKNSTNIDTVIDW 644
            + L+   L+W ++LF+K+EMEL+L+GLQ +GKT+ VNVIA+G ++EDMIPTVGFNMRK+TKGNVTIKLWD+GGQPRFRSMWERYCR                +  S++ELH+LL K  L GIP+LVLGNK D P AL +++L+E+M L +I DRE+CCY ISCK   NID  + W
Sbjct:    2 LALFNKLLDWFKALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITKGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQDKIEASKNELHNLLDKAQLQGIPVLVLGNKRDIPGALDEKELIERMNLSAIQDREICCYSISCKEKDNIDITLQW 176
The following BLAST results are available for this feature:
BLAST of CK933463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 207
Match NameE-valueIdentityDescription
ARL8B_RAT3.880e-5961.14ADP-ribosylation factor-like protein 8B OS=Rattus ... [more]
ARL8B_PONAB3.880e-5961.14ADP-ribosylation factor-like protein 8B OS=Pongo a... [more]
ARL8B_MOUSE3.880e-5961.14ADP-ribosylation factor-like protein 8B OS=Mus mus... [more]
ARL8B_HUMAN3.880e-5961.14ADP-ribosylation factor-like protein 8B OS=Homo sa... [more]
ARL8B_MACFA8.643e-5960.57ADP-ribosylation factor-like protein 8B OS=Macaca ... [more]
ARL8B_BOVIN1.129e-5860.57ADP-ribosylation factor-like protein 8B OS=Bos tau... [more]
ARL8A_CHICK1.129e-5859.43ADP-ribosylation factor-like protein 8A OS=Gallus ... [more]
AR8BA_DANRE1.474e-5860.57ADP-ribosylation factor-like protein 8B-A OS=Danio... [more]
ARL8A_HUMAN3.284e-5858.86ADP-ribosylation factor-like protein 8A OS=Homo sa... [more]
ARL8A_XENTR2.780e-5758.29ADP-ribosylation factor-like protein 8A OS=Xenopus... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004285_C11 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0003_IVF_C11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933463 ID=CK933463; Name=CK933463; organism=Citrus sinensis; type=EST; length=841bp
GGGGGAACAGCGAGGGAATTGTAGGAGAAAAGAAAAGAAGCAAGAAAAGT
TTTTTCGCTTTTTCCCAGCTTTTATACTTCAAAGGCGAAACCCTAGCTTC
TTATTTTGTCGAATAAAAGATGGGATTATGGGAAGCTTTTCTCAACTGGC
TTCGAAGTCTCTTCTTTAAACAAGAAATGGAGCTATCTTTGATAGGGCTT
CAGAATGCAGGCAAGACATCCCTTGTGAATGTTATCGCAACTGGTGGATA
TAGTGAAGATATGATCCCAACAGTAGGATTTAATATGAGGAAAGTGACTA
AGGGGAATGTCACAATAAAGCTGTGGGATCTTGGAGGCCAACCACGGTTT
CGCAGTATGTGGGAGAGATACTGTCGTGCAGTTTCAGCTATTGTTTACGT
TGTTGATGCTGTTGATTATGATAACTTGCCTGTGTCAAGAAGTGAACTCC
ATGACTTGTTAAGTAAACCCTCGCTGAATGGTATCCCATTGCTGGTACTG
GGAAACAAGATTGATAAACCAGAAGCCTTGTCTAAAGAGGATCTGATGGA
ACAAATGGGGCTGAAGTCCATTACCGATAGAGAAGTTTGTTGCTACATGA
TTTCATGCAAAAACTCTACCAACATTGACACGGTTATTGATTGGCTTGTA
AAGCATTCAAAATCAAAGAGTTGAGTTTCTTCCTCTAGTTTTGAACTACA
TGGGAGCCTGTTTTCAACAACTGATTCAGGATGAGTTGAGTGAGCTGTAC
TGTTAGTCTGCTCGGGTCAGTCGATGTGTGACCATAGTTTTTTATTTCGA
CTTGGCTTTTTATCGTAAATNNNNATTTGTTTAGTTTTACA
back to top