CK933472

Overview
NameCK933472
Unique NameCK933472
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length793
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933472 vs. ExPASy Swiss-Prot
Match: BGAL3_ARATH (Beta-galactosidase 3 OS=Arabidopsis thaliana GN=BGAL3 PE=1 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 7.485e-86
Identity = 148/159 (93.08%), Postives = 154/159 (96.86%), Query Frame = 3
Query:  312 VTYDRKALLINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVRFIKTIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPSISFRTDNEPFKRAMQGFTEKIVNLMKSENLFESQGGPIILSQIENEYG 788
            VTYDRKALLINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGG+DVIETYVFWN+HEPSPG Y+FEGR DLVRF+KTI KAGLYAHLRIGPYVCAEWNFGGFPVWLKYVP ISFRTDNEPFKRAM+GFTE+IV LMKSENLFESQGGPIILSQIENEYG
Sbjct:   33 VTYDRKALLINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGIDVIETYVFWNLHEPSPGKYDFEGRNDLVRFVKTIHKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNEPFKRAMKGFTERIVELMKSENLFESQGGPIILSQIENEYG 191          
BLAST of CK933472 vs. ExPASy Swiss-Prot
Match: BGAL5_ORYSJ (Beta-galactosidase 5 OS=Oryza sativa subsp. japonica GN=Os03g0165400 PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 5.021e-82
Identity = 137/159 (86.16%), Postives = 151/159 (94.97%), Query Frame = 3
Query:  312 VTYDRKALLINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVRFIKTIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPSISFRTDNEPFKRAMQGFTEKIVNLMKSENLFESQGGPIILSQIENEYG 788
            VTYD+KA+L++GQRRILFSGSIHYPRSTP+MW+ LI+KAKDGGLDVI+TYVFWN HEP+PGNYNFEGRYDLVRFIKT+QKAG++ HLRIGPY+C EWNFGGFPVWLKYVP ISFRTDNEPFK AMQGFTEKIV +MKSENLF SQGGPIILSQIENEYG
Sbjct:   27 VTYDKKAVLVDGQRRILFSGSIHYPRSTPEMWDGLIEKAKDGGLDVIQTYVFWNGHEPTPGNYNFEGRYDLVRFIKTVQKAGMFVHLRIGPYICGEWNFGGFPVWLKYVPGISFRTDNEPFKNAMQGFTEKIVGMMKSENLFASQGGPIILSQIENEYG 185          
BLAST of CK933472 vs. ExPASy Swiss-Prot
Match: BGA12_ARATH (Beta-galactosidase 12 OS=Arabidopsis thaliana GN=BGAL12 PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 7.503e-78
Identity = 134/159 (84.28%), Postives = 144/159 (90.57%), Query Frame = 3
Query:  312 VTYDRKALLINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVRFIKTIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPSISFRTDNEPFKRAMQGFTEKIVNLMKSENLFESQGGPIILSQIENEYG 788
            VTYDRKA++INGQRRIL SGSIHYPRSTP+MW DLIQKAKDGGLDVI+TYVFWN HEPSPG Y FE RYDLV+FIK +Q+AGLY HLRIGPYVCAEWNFGGFPVWLKYVP + FRTDNEPFK AMQ FTEKIV +MK E LFE+QGGPIILSQIENEYG
Sbjct:   29 VTYDRKAVIINGQRRILLSGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGQYYFEDRYDLVKFIKVVQQAGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGMVFRTDNEPFKAAMQKFTEKIVRMMKEEKLFETQGGPIILSQIENEYG 187          
BLAST of CK933472 vs. ExPASy Swiss-Prot
Match: BGAL5_ARATH (Beta-galactosidase 5 OS=Arabidopsis thaliana GN=BGAL5 PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.724e-77
Identity = 133/158 (84.18%), Postives = 142/158 (89.87%), Query Frame = 3
Query:  312 VTYDRKALLINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVRFIKTIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPSISFRTDNEPFKRAMQGFTEKIVNLMKSENLFESQGGPIILSQIENEY 785
            VTYD+KA++ING RRIL SGSIHYPRSTP+MWEDLI+KAKDGGLDVI+TYVFWN HEPSPG YNFEGRYDLVRFIKTIQ+ GLY HLRIGPYVCAEWNFGGFPVWLKYV  ISFRTDN PFK AMQGFTEKIV +MK    F SQGGPIILSQIENE+
Sbjct:   31 VTYDKKAIVINGHRRILLSGSIHYPRSTPEMWEDLIKKAKDGGLDVIDTYVFWNGHEPSPGTYNFEGRYDLVRFIKTIQEVGLYVHLRIGPYVCAEWNFGGFPVWLKYVDGISFRTDNGPFKSAMQGFTEKIVQMMKEHRFFASQGGPIILSQIENEF 188          
BLAST of CK933472 vs. ExPASy Swiss-Prot
Match: BGAL_ASPOF (Beta-galactosidase OS=Asparagus officinalis PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.198e-75
Identity = 130/159 (81.76%), Postives = 144/159 (90.57%), Query Frame = 3
Query:  312 VTYDRKALLINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVRFIKTIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPSISFRTDNEPFKRAMQGFTEKIVNLMKSENLFESQGGPIILSQIENEYG 788
            VTYD K+++INGQRRIL SGSIHYPRSTP+MW DLIQKAKDGGLDVI+TYVFWN HEPSPG Y F GRYDLVRF+K +++AGLYAHLRIGPYVCAEWNFGGFPVWLKYVP I FRTDN PFK AM  FTEKIV++MK+E L+E+QGGPIILSQIENEYG
Sbjct:   27 VTYDHKSVIINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGQYYFGGRYDLVRFLKLVKQAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPGIHFRTDNGPFKAAMGKFTEKIVSMMKAEGLYETQGGPIILSQIENEYG 185          
BLAST of CK933472 vs. ExPASy Swiss-Prot
Match: BGAL2_ORYSJ (Beta-galactosidase 2 OS=Oryza sativa subsp. japonica GN=Os01g0580200 PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.198e-75
Identity = 130/159 (81.76%), Postives = 143/159 (89.94%), Query Frame = 3
Query:  312 VTYDRKALLINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVRFIKTIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPSISFRTDNEPFKRAMQGFTEKIVNLMKSENLFESQGGPIILSQIENEYG 788
            VTYDRKA+++NGQRRIL SGSIHYPRSTP+MW DLI+KAKDGGLDV++TYVFWN HEPSPG Y FEGRYDLV FIK +++AGLY +LRIGPYVCAEWNFGGFPVWLKYVP ISFRTDNEPFK  MQ FT KIV +MKSE LFE QGGPIILSQIENE+G
Sbjct:   26 VTYDRKAVVVNGQRRILISGSIHYPRSTPEMWPDLIEKAKDGGLDVVQTYVFWNGHEPSPGQYYFEGRYDLVHFIKLVKQAGLYVNLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNEPFKAEMQKFTTKIVEMMKSEGLFEWQGGPIILSQIENEFG 184          
BLAST of CK933472 vs. ExPASy Swiss-Prot
Match: BGAL_MALDO (Beta-galactosidase OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.668e-75
Identity = 128/159 (80.50%), Postives = 146/159 (91.82%), Query Frame = 3
Query:  312 VTYDRKALLINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVRFIKTIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPSISFRTDNEPFKRAMQGFTEKIVNLMKSENLFESQGGPIILSQIENEYG 788
            V+YD KA++INGQ+RIL SGSIHYPRSTP+MW DLIQKAKDGGLDVI+TYVFWN HEPSPGNY FE RYDLV+FIK +Q+ GL+ +LRIGPYVCAEWNFGGFPVWLKYVP I+FRTDNEPFK AMQ FTEKIV++MK+E LF++QGGPIILSQIENE+G
Sbjct:   26 VSYDHKAIIINGQKRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPSPGNYYFEERYDLVKFIKLVQQEGLFVNLRIGPYVCAEWNFGGFPVWLKYVPGIAFRTDNEPFKAAMQKFTEKIVSMMKAEKLFQTQGGPIILSQIENEFG 184          
BLAST of CK933472 vs. ExPASy Swiss-Prot
Match: BGAL1_ARATH (Beta-galactosidase 1 OS=Arabidopsis thaliana GN=BGAL1 PE=1 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.950e-74
Identity = 126/159 (79.25%), Postives = 142/159 (89.31%), Query Frame = 3
Query:  312 VTYDRKALLINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVRFIKTIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPSISFRTDNEPFKRAMQGFTEKIVNLMKSENLFESQGGPIILSQIENEYG 788
            V+YD +A+ ING+RRIL SGSIHYPRSTP+MW DLI+KAK+GGLDVI+TYVFWN HEPSPG Y FEG YDLV+F+K +Q++GLY HLRIGPYVCAEWNFGGFPVWLKY+P ISFRTDN PFK  MQ FT KIVN+MK+E LFESQGGPIILSQIENEYG
Sbjct:   34 VSYDSRAITINGKRRILISGSIHYPRSTPEMWPDLIRKAKEGGLDVIQTYVFWNGHEPSPGKYYFEGNYDLVKFVKLVQQSGLYLHLRIGPYVCAEWNFGGFPVWLKYIPGISFRTDNGPFKAQMQRFTTKIVNMMKAERLFESQGGPIILSQIENEYG 192          
BLAST of CK933472 vs. ExPASy Swiss-Prot
Match: BGAL2_ARATH (Beta-galactosidase 2 OS=Arabidopsis thaliana GN=BGAL2 PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.032e-74
Identity = 128/159 (80.50%), Postives = 142/159 (89.31%), Query Frame = 3
Query:  312 VTYDRKALLINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVRFIKTIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPSISFRTDNEPFKRAMQGFTEKIVNLMKSENLFESQGGPIILSQIENEYG 788
            VTYD KAL+INGQRRIL SGSIHYPRSTP+MW DLI+KAK+GGLDVI+TYVFWN HEPSPGNY F+ RYDLV+F K + +AGLY  LRIGPYVCAEWNFGGFPVWLKYVP + FRTDNEPFK AMQ FT+KIV++MK E LFE+QGGPIILSQIENEYG
Sbjct:   29 VTYDHKALIINGQRRILISGSIHYPRSTPEMWPDLIKKAKEGGLDVIQTYVFWNGHEPSPGNYYFQDRYDLVKFTKLVHQAGLYLDLRIGPYVCAEWNFGGFPVWLKYVPGMVFRTDNEPFKIAMQKFTKKIVDMMKEEKLFETQGGPIILSQIENEYG 187          
BLAST of CK933472 vs. ExPASy Swiss-Prot
Match: BGAL_SOLLC (Beta-galactosidase OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.498e-73
Identity = 124/159 (77.99%), Postives = 142/159 (89.31%), Query Frame = 3
Query:  312 VTYDRKALLINGQRRILFSGSIHYPRSTPDMWEDLIQKAKDGGLDVIETYVFWNVHEPSPGNYNFEGRYDLVRFIKTIQKAGLYAHLRIGPYVCAEWNFGGFPVWLKYVPSISFRTDNEPFKRAMQGFTEKIVNLMKSENLFESQGGPIILSQIENEYG 788
            V+YD KA+++NGQR+IL SGSIHYPRSTP+MW DLIQKAK+GG+DVI+TYVFWN HEP  G Y FE RYDLV+FIK +Q+AGLY HLRIGPY CAEWNFGGFPVWLKYVP ISFRT+NEPFK AMQ FT KIV++MK+E L+E+QGGPIILSQIENEYG
Sbjct:   24 VSYDHKAIIVNGQRKILISGSIHYPRSTPEMWPDLIQKAKEGGVDVIQTYVFWNGHEPEEGKYYFEERYDLVKFIKVVQEAGLYVHLRIGPYACAEWNFGGFPVWLKYVPGISFRTNNEPFKAAMQKFTTKIVDMMKAEKLYETQGGPIILSQIENEYG 182          
The following BLAST results are available for this feature:
BLAST of CK933472 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 57
Match NameE-valueIdentityDescription
BGAL3_ARATH7.485e-8693.08Beta-galactosidase 3 OS=Arabidopsis thaliana GN=BG... [more]
BGAL5_ORYSJ5.021e-8286.16Beta-galactosidase 5 OS=Oryza sativa subsp. japoni... [more]
BGA12_ARATH7.503e-7884.28Beta-galactosidase 12 OS=Arabidopsis thaliana GN=B... [more]
BGAL5_ARATH3.724e-7784.18Beta-galactosidase 5 OS=Arabidopsis thaliana GN=BG... [more]
BGAL_ASPOF1.198e-7581.76Beta-galactosidase OS=Asparagus officinalis PE=2 S... [more]
BGAL2_ORYSJ1.198e-7581.76Beta-galactosidase 2 OS=Oryza sativa subsp. japoni... [more]
BGAL_MALDO2.668e-7580.50Beta-galactosidase OS=Malus domestica PE=1 SV=1[more]
BGAL1_ARATH2.950e-7479.25Beta-galactosidase 1 OS=Arabidopsis thaliana GN=BG... [more]
BGAL2_ARATH5.032e-7480.50Beta-galactosidase 2 OS=Arabidopsis thaliana GN=BG... [more]
BGAL_SOLLC2.498e-7377.99Beta-galactosidase OS=Solanum lycopersicum PE=1 SV... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004285_C01 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0003_IVF_C01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933472 ID=CK933472; Name=CK933472; organism=Citrus sinensis; type=EST; length=793bp
GGGGAGTCCCCAGAGTATAGTAAGGCAACCGCAATGGACCCTCTGTAGCT
CTTGCCTTACAAACATTAAGCCAAGTAGACCTCACGACCGTCACGCCTTT
TCTCACGCTCTGTCGTTTCTTTTCCTTTTAATCTTTAGCTTTCAATTTTA
CCTCCACCGCCAATCTAGAAAAACTAAGAGTTTTGTTTTTTGGGCTTGTG
AGCAAGGGAAGCTGAGATTGAAGAGGAAAAATGGCAACTTTATTTGTTTA
CAGGATGCTCATTGTGTTTTGCTTGAGCTTGTGCTTGTGTTGTCATCATA
TACATTGCAGTGTCACTTACGATAGAAAGGCTTTACTGATTAATGGGCAA
AGAAGAATCCTTTTCTCTGGTTCTATCCATTACCCAAGAAGCACCCCTGA
CATGTGGGAAGATCTTATACAGAAGGCAAAAGATGGAGGTCTTGATGTGA
TTGAAACTTATGTTTTCTGGAATGTGCATGAGCCGTCTCCTGGAAATTAT
AATTTTGAAGGGAGATATGATCTGGTCAGATTCATCAAAACGATACAAAA
AGCTGGGCTTTATGCTCATCTTCGCATTGGACCTTATGTTTGTGCTGAAT
GGAATTTTGGAGGATTTCCTGTCTGGTTGAAGTATGTCCCCAGCATCAGT
TTCAGAACAGACAATGAACCCTTCAAGAGGGCAATGCAAGGCTTCACTGA
AAAGATTGTGAATCTGATGAAGAGTGAGAATTTGTTTGAGTCCCAGGGCG
GTCCCATTATCCTCTCTCAGATTGAGAATGAGTATGGGGCACA
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