CK933949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2) HSP 1 Score: 201.06 bits (510), Expect = 6.310e-51 Identity = 113/267 (42.32%), Postives = 155/267 (58.05%), Query Frame = 1 Query: 4 IIEGLGESKEASGLSEFQ--SLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFA 798 +I+ + ES E L + L + + GK+ FLVLDDVW+ D KWD LK G G+ IL+TTR E I +MGT + +S L++E+CWL FKQ AF + E +L IG++I +KC G+PLAAK +G LLR K EW+ + DSE+W L + +L L LSY+ LP + +++CF+YCAVFPKD ++KE LI+LWMA + + +N L RSFFQEIE F KMHD++HD A Sbjct: 222 LIKAIVESIEGKSLGDMDLAPLQKKLQELLNGKRYFLVLDDVWNEDQEKWDNLRAVLKIGASGASILITTRLEKIGSIMGTLQLYQLS--NLSQEDCWLLFKQRAFCHQT-ETSPKLMEIGKEIVKKCGGVPLAAKTLGGLLRFKREESEWEHVRDSEIWNLPQDENSVLPALRLSYHHLPLD--LRQCFAYCAVFPKDTKIEKEYLIALWMAHSFLLSKGNMELEDVGNEVWNELYLRSFFQEIEVKSGKTYF---KMHDLIHDLA 480
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: RGA1_SOLBU (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 SV=2) HSP 1 Score: 191.045 bits (484), Expect = 6.530e-48 Identity = 109/267 (40.82%), Postives = 150/267 (56.18%), Query Frame = 1 Query: 4 IIEGLGESKEASGLSEFQ--SLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFA 798 +I+ + ES E LS+ L + + GK+ FLVLDDVW+ D +KW LK G G+ +L TTR E + +MGT + +S L+ E+CW F Q AF G E L IG++I +KC G+PLAAK +G +LR K +EW+ + DS +W L + +L L LSY+ LP + +++CF YCAVFPKD M KE LI+ WMA G+ + +N L RSFFQEIE + F KMHD++HD A Sbjct: 222 LIKAIVESIEGKSLSDMDLAPLQKKLQELLNGKRYFLVLDDVWNEDQHKWANLRAVLKVGASGAFVLTTTRLEKVGSIMGTLQPYELS--NLSPEDCWFLFMQRAF-GHQEEINPNLMAIGKEIVKKCGGVPLAAKTLGGILRFKREEREWEHVRDSPIWNLPQDESSILPALRLSYHHLPLD--LRQCFVYCAVFPKDTKMAKENLIAFWMAHGFLLSKGNLELEDVGNEVWNELYLRSFFQEIEVESGKTYF---KMHDLIHDLA 480
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: RGA2_SOLBU (Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 3.583e-46 Identity = 106/265 (40.00%), Postives = 148/265 (55.85%), Query Frame = 1 Query: 4 IIEGLGESKEASGLSEFQSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFA 798 I+E + E + G + L + + GK+ LVLDDVW+ D KW LK G G+ +L TTR E + +MGT + +S L++E+CWL F Q A FG E L IG++I +K G+PLAAK +G +L K + W+ + DS +W L + +L L LSY+ LP + +K+CF+YCAVFPKD M+KE+LISLWMA G+ + + L RSFFQEIE + F KMHD++HD A Sbjct: 226 IVESI-EGRPLLGEMDLAPLQKKLQELLNGKRYLLVLDDVWNEDQQKWANLRAVLKVGASGASVLTTTRLEKVGSIMGTLQPYELS--NLSQEDCWLLFMQRA-FGHQEEINPNLVAIGKEIVKKSGGVPLAAKTLGGILCFKREERAWEHVRDSPIWNLPQDESSILPALRLSYHQLPLD--LKQCFAYCAVFPKDAKMEKEKLISLWMAHGFLLSKGNMELEDVGDEVWKELYLRSFFQEIEVKDGKTYF---KMHDLIHDLA 481
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: RGA4_SOLBU (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 9.757e-44 Identity = 104/258 (40.31%), Postives = 143/258 (55.43%), Query Frame = 1 Query: 25 SKEASGLSEFQSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFA 798 S L+ FQ + + + GK+ LVLDDVW+ D KW L G G+ IL TTR E + +MGT + +S L+ + L F Q AF G+ E L IG++I +KC G+PLAAK +G LLR K EW+ + D+E+W L + +L L LSY+ LP + +++CF+YCAVFPKD M KE LI+LWMA G+ + +N L RSFFQEIE + F K+HD++HD A Sbjct: 236 SPHVEDLASFQKKLQEL---LNGKRYLLVLDDVWNDDLEKWAKLRAVLTVGARGASILATTRLEKVGSIMGTLQPYHLS--NLSPHDSLLLFMQRAF-GQQKEANPNLVAIGKEIVKKCGGVPLAAKTLGGLLRFKREESEWEHVRDNEIWSLPQDESSILPALRLSYHHLPLD--LRQCFAYCAVFPKDTKMIKENLITLWMAHGFLLSKGNLELEDVGNEVWNELYLRSFFQEIEAKSGNTYF---KIHDLIHDLA 482
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: R13L1_ARATH (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.561e-33 Identity = 83/243 (34.16%), Postives = 132/243 (54.32%), Query Frame = 1 Query: 91 GKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLE--PIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYF-NAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFVS 810 G LVLDD+W+ + WD + GS+ILVTTR++ +A +M +++ L++ +CW F + F + E C E + +I KC+GLPLA K +G +LR + V EW+R+L S +W L LL L +SY LP++ +KRCF+YC++FPK ++ +K++++ LWMA+G+ YF+ L +RS Q+ + R MHD +++ AQF S Sbjct: 276 GLPFLLVLDDLWNENFADWDLLRQPFIHAAQGSQILVTTRSQRVASIMCAVHVH--NLQPLSDGDCWSLFMKTVFGNQ--EPCLNREIGDLAERIVHKCRGLPLAVKTLGGVLRFEGKVIEWERVLSSRIWDLPADKSNLLPVLRVSYYYLPAH--LKRCFAYCSIFPKGHAFEKDKVVLLWMAEGFLQQTRSSKNLEELGNEYFSELESRSLLQKTK--------TRYIMHDFINELAQFAS 504
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: DRL21_ARATH (Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.023e-32 Identity = 84/264 (31.82%), Postives = 130/264 (49.24%), Query Frame = 1 Query: 25 SKEASGLSEFQSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDC-ERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMA-QGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFVS 810 + A + SL + +++ GK+ LVLDD W ++W+ F + GSKI++TTR+E ++ + ++ + EECW + AF + LE IG++IA +CKGLPLAA+ I + LRSK +W + + +L L LSY+ LP +KRCF+ C++FPK + D+EEL+ LWMA + Y L +SFFQ + D MHD+++D A+ VS Sbjct: 249 TSSAVNTEDLPSLQIQLKKTLSGKRFLLVLDDFWSESDSEWESFQVAFTDAEEGSKIVLTTRSEIVSTV--AKAEKIYQMKLMTNEECWELISRFAFGNISVGSINQELEGIGKRIAEQCKGLPLAARAIASHLRSKPNPDDWYAVSKN----FSSYTNSILPVLKLSYDSLP--PQLKRCFALCSIFPKGHVFDREELVLLWMAIDLLYQPRSSRRLEDIGNDYLGDLVAQSFFQRL-----DITMTSFVMHDLMNDLAKAVS 499
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: RPM1_ARATH (Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.568e-32 Identity = 82/258 (31.78%), Postives = 134/258 (51.94%), Query Frame = 1 Query: 52 FQSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDC--ERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQGLLAP--LLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFVSR 813 ++ L+ + + K+ +VLDDVW + W L +G++GS++++TTR+ ++A S IE L E+E W+ F AF E C + LEPI RK+ +C+GLPLA +G+++ +K EW+++ + W+L + + + LS+NDLP +KRCF YC++FP +Y M ++ LI +WMAQ + Y N L R+ Q I + KMHD++ + A VS+ Sbjct: 265 YRELVEKLVEYLQSKRYIVVLDDVWT--TGLWREISIALPDGIYGSRVMMTTRDMNVASFPYGIGSTKHEIELLKEDEAWVLFSNKAF-PASLEQCRTQNLEPIARKLVERCQGLPLAIASLGSMMSTKKFESEWKKVYSTLNWELNNNHELKIVRSIMFLSFNDLPYP--LKRCFLYCSLFPVNYRMKRKRLIRMWMAQRFVEPIRGVKAEEVADSYLNELVYRNMLQVILWNPFGRP-KAFKMHDVIWEIALSVSK 516
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: R13L4_ARATH (Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana GN=RPP13L4 PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 3.047e-29 Identity = 85/269 (31.60%), Postives = 140/269 (52.04%), Query Frame = 1 Query: 4 IIEGLGESKEASGLSEFQSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCER--LEPIGRKIARKCKGLPLAAKVIGNLLRSKITV-KEWQRILD---SEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHD 792 I+ LG+ AS + +L+ I + + GK+ +V+DDVWD + + WD + L G G ++VTTR+ES+A+ + + T E L+ + WL F +AF CER LE +G++I KCKGLPL K +G LL K V EW+RI + E+ +++ L LSY++LPS+ +K C +++P+D + K++L+ W+ +G+ F+ L R + ++K + CK+HD+V D Sbjct: 233 ILRNLGD---ASVGDDIGTLLRKIQQYLLGKRYLIVMDDVWDKNLSWWDKIYQGLPRG-QGGSVIVTTRSESVAKRVQARDDKTHRPELLSPDNSWLLFCNVAFAAN-DGTCERPELEDVGKEIVTKCKGLPLTIKAVGGLLLCKDHVYHEWRRIAEHFQDELRGNTSETDNVMSSLQLSYDELPSH--LKSCILTLSLYPEDCVIPKQQLVHGWIGEGFVMWRNGRSATESGEDCFSGLTNRCLIEVVDKTY-SGTIITCKIHDMVRD 493
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: RPP13_ARATH (Disease resistance protein RPP13 OS=Arabidopsis thaliana GN=RPP13 PE=2 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 7.767e-25 Identity = 78/266 (29.32%), Postives = 136/266 (51.13%), Query Frame = 1 Query: 13 GLGESKEASGLSEF--QSLMSHIHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILDSEMWKLEEIGQGLLAPLL--LSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFA 798 G+ +E + +F + L +++ + GKK +V+DD+W+ ++ WD L GS++++TTR +++A + + L EE W F+Q AF +D E L G+++ +KC+GLPL V+ LL K T EW + +S +W+ + +AP++ LS+ +L S K CF Y ++FP+DY +D E+LI L +A+G+ Y L RS + + ++ M C++HD++ D A Sbjct: 241 GMTSGEELEKIRKFAEEELEVYLYGLLEGKKYLVVVDDIWEREA--WDSLKRALPCNHEGSRVIITTRIKAVAEGVDG-RFYAHKLRFLTFEESWELFEQRAFRNIQRKD-EDLLKTGKEMVQKCRGLPLCIVVLAGLLSRK-TPSEWNDVCNS-LWRRLKDDSIHVAPIVFDLSFKELRHES--KLCFLYLSIFPEDYEIDLEKLIHLLVAEGFIQGDEEMMMEDVARYYIEELIDRSLLEAVRRER--GKVMSCRIHDLLRDVA 496
BLAST of CK933949 vs. ExPASy Swiss-Prot
Match: RPS5_ARATH (Disease resistance protein RPS5 OS=Arabidopsis thaliana GN=RPS5 PE=1 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.730e-24 Identity = 76/249 (30.52%), Postives = 123/249 (49.40%), Query Frame = 1 Query: 73 IHRSIGGKKIFLVLDDVWDGDSNKWDPFFFCLKNGLHGSKILVTTRNESIARMMGTTESDTISIEQLAEEECWLFFKQLAFFGRCFEDCERLEPIGRKIARKCKGLPLAAKVIGNLLRSKITVKEWQRILD---SEMWKLEEIGQGLLAPLLLSYNDLPSNSMVKRCFSYCAVFPKDYSMDKEELISLWMAQGYFNAXXXXXXXXXXXXYFNILATRSFFQEIEKDEDDDDFMRCKMHDIVHDFAQFVS 810 IH + +K L+LDD+W+ + K + K+ +G K+ TTR+ + MG D + + L EE W F Q+ + + RK+ARKC+GLPLA VIG + K TV EW +D S + +L L SY++L + ++K CF YC++FP+DY +DKE L+ W+++G+ N + I+ T + E++ + KMHD+V + A ++S Sbjct: 251 IHNVLRRRKFVLLLDDIWEKVNLKAVGVPYPSKD--NGCKVAFTTRSRDVCGRMGV--DDPMEVSCLQPEESWDLF-QMKVGKNTLGSHPDIPGLARKVARKCRGLPLALNVIGEAMACKRTVHEWCHAIDVLTSSAIDFSGMEDEILHVLKYSYDNL-NGELMKSCFLYCSLFPEDYLIDKEGLVDYWISEGFINEKEGRERNINQG--YEIIGT--LVRACLLLEEERNKSNVKMHDVVREMALWIS 489 The following BLAST results are available for this feature:
BLAST of CK933949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933949 ID=CK933949; Name=CK933949; organism=Citrus sinensis; type=EST; length=814bpback to top |