CK934028

Overview
NameCK934028
Unique NameCK934028
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK934028 vs. ExPASy Swiss-Prot
Match: YC22_ARATH (Uncharacterized calcium-binding protein At1g02270 OS=Arabidopsis thaliana GN=At1g02270 PE=2 SV=2)

HSP 1 Score: 350.132 bits (897), Expect = 9.824e-96
Identity = 172/237 (72.57%), Postives = 198/237 (83.54%), Query Frame = 1 
Query:  190 SVPRSNSGYVSSIMGECCISCTTFNILAPIYKRLGHQNQSLRESDVRDSWFNRNQTILDWLICERSSVICLQEFWVGNEELVLMYQERLGNAGYNTFSLARTNNRGDGLLTALHRDYFNVLNYRELLFNDFGDRVAQLVHVESVVPF-FQNQGGGQQEILIVNTHLLFPHDSSLSVVRLHQVYKILQYLELYQTENKLNHIPIILCGDWNGSKRGHVYKFLRSQGFVSSYDVAHQYT 897
            SV R NS   SS++ E  ISCTTFNILAPIYKR+  +N S RESD R  W  RNQ ILD L+ +RSSVICLQE WVGNEELV MY  +L ++GY  + LARTN+RGDGLLTA+H+D+F V+NYRELLFNDFGDRVAQL+HV++V+PF    +   QQE++IVNTHLLFPHDSSLS+VRLHQVYKIL+YLE YQ ENKLNH+PIILCGDWNGSKRGHVYKFLRSQGF+SSYD AHQYT
Sbjct:   54 SVMRLNSNLASSMV-ESNISCTTFNILAPIYKRVDQKNHSTRESDFRTLWLARNQRILDLLLHQRSSVICLQEVWVGNEELVNMYHHQLSSSGYTIYQLARTNSRGDGLLTAIHKDHFKVVNYRELLFNDFGDRVAQLLHVKTVIPFPLNGKQDVQQEVIIVNTHLLFPHDSSLSIVRLHQVYKILEYLEAYQKENKLNHMPIILCGDWNGSKRGHVYKFLRSQGFISSYDDAHQYT 289
The following BLAST results are available for this feature:
BLAST of CK934028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
YC22_ARATH9.824e-9672.57Uncharacterized calcium-binding protein At1g02270 ... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004542_C09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_C09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934028 ID=CK934028; Name=CK934028; organism=Citrus sinensis; type=EST; length=897bp
GGGGATTGTATCAATTTTAATTTTTACCCACAAAACTCAGAGCATCAGCA
TCTCTTTGCAGAACCATCGTCATCTCTTTCAATCAAAGTGGGCAATAGTT
GTAAAATGGTGGCAGTAGTGGATTCGAACAATTTAAGCATTCCGAATTTG
AATACAAATGGTAATGAGTCCCGCGTTGGTTATAAAAGATCAGTTCCAAG
AAGCAATAGTGGGTATGTTTCTTCAATAATGGGCGAGTGTTGCATTTCTT
GTACCACTTTTAATATTTTGGCTCCCATATACAAGCGACTCGGTCATCAG
AATCAAAGTCTTCGTGAGAGTGATGTAAGAGACTCCTGGTTCAACAGAAA
CCAGACTATTTTGGATTGGTTGATTTGTGAGAGATCTTCTGTTATATGTC
TCCAGGAATTTTGGGTTGGAAATGAAGAACTTGTGCTTATGTATCAGGAG
AGACTTGGTAATGCAGGCTACAATACTTTCAGCCTTGCTCGCACCAACAA
TCGTGGGGACGGCCTTTTAACTGCTTTACATCGGGACTACTTTAACGTTC
TAAATTATAGAGAGTTGCTTTTTAATGACTTTGGCGACCGTGTTGCTCAG
CTTGTACACGTTGAATCTGTTGTCCCCTTCTTTCAAAACCAAGGAGGTGG
CCAACAAGAAATTCTGATTGTAAACACCCATTTGTTATTTCCTCATGATT
CAAGTCTATCTGTTGTAAGACTGCATCAGGTATACAAAATACTTCAATAT
CTAGAATTGTATCAGACAGAAAACAAGCTTAATCACATACCCATCATACT
CTGTGGTGACTGGAATGGAAGCAAGCGTGGACATGTTTACAAATTCCTTA
GATCCCAGGGCTTTGTATCGTCTTATGACGTTGCTCACCAATACACT
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