CK934104

Overview
NameCK934104
Unique NameCK934104
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length871
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12604 contig Csv1_Contig12604:10..879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934104 vs. ExPASy Swiss-Prot
Match: PCY1B_HUMAN (Choline-phosphate cytidylyltransferase B OS=Homo sapiens GN=PCYT1B PE=1 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.999e-65
Identity = 123/224 (54.91%), Postives = 154/224 (68.75%), Query Frame = 2
Query:  128 PSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMXXXXXXXXXXXXXXRVGEKIQTVAMHRNE----WVENADRWVAGFFEMF 787
            P+DRPVRVYADGI+DLFH GHAR+L QAK  FPN+YLLVG C+D+ THKFKG TVM E ERYE+LRHC++VDEVI DAPW +T EFL+KH+IDFVAHD +PY  +S    DVY+ +K AG F  T+RT+GISTSDII RIV+DY+ Y  RNL RGY+ K+L VS++ EKR R                 R  E +  V    ++    W E +  ++  F E+F
Sbjct:   72 PADRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPY--SSAGSDDVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKRYRFQNQVDKMKEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGNFLELF 293          
BLAST of CK934104 vs. ExPASy Swiss-Prot
Match: PCY1B_RAT (Choline-phosphate cytidylyltransferase B OS=Rattus norvegicus GN=Pcyt1b PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 2.481e-64
Identity = 122/224 (54.46%), Postives = 153/224 (68.30%), Query Frame = 2
Query:  128 PSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMXXXXXXXXXXXXXXRVGEKIQTVAMHRNE----WVENADRWVAGFFEMF 787
            P DRPVRVYADGI+DLFH GHAR+L QAK  FPN+YLLVG C+D+ THKFKG TVM E ERYE+LRHC++VDEVI DAPW +T EFL+KH+IDFVAHD +PY  +S    DVY+ +K AG F  T+RT+GISTSDII RIV+DY+ Y  RNL RGY+ K+L VS++ EK+ R                 R  E +  V    ++    W E +  ++  F E+F
Sbjct:   72 PVDRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPY--SSAGSDDVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYRFQNQVDKMKEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGNFLELF 293          
BLAST of CK934104 vs. ExPASy Swiss-Prot
Match: PCY1B_MOUSE (Choline-phosphate cytidylyltransferase B OS=Mus musculus GN=Pcyt1b PE=1 SV=2)

HSP 1 Score: 245.743 bits (626), Expect = 2.481e-64
Identity = 122/224 (54.46%), Postives = 153/224 (68.30%), Query Frame = 2
Query:  128 PSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMXXXXXXXXXXXXXXRVGEKIQTVAMHRNE----WVENADRWVAGFFEMF 787
            P DRPVRVYADGI+DLFH GHAR+L QAK  FPN+YLLVG C+D+ THKFKG TVM E ERYE+LRHC++VDEVI DAPW +T EFL+KH+IDFVAHD +PY  +S    DVY+ +K AG F  T+RT+GISTSDII RIV+DY+ Y  RNL RGY+ K+L VS++ EK+ R                 R  E +  V    ++    W E +  ++  F E+F
Sbjct:   72 PVDRPVRVYADGIFDLFHSGHARALMQAKTLFPNSYLLVGVCSDDLTHKFKGFTVMNEAERYEALRHCRYVDEVIRDAPWTLTPEFLEKHKIDFVAHDDIPY--SSAGSDDVYKHIKEAGMFVPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYRFQNQVDKMKEKVKNVEERSKEFVNRVEEKSHDLIQKWEEKSREFIGNFLELF 293          
BLAST of CK934104 vs. ExPASy Swiss-Prot
Match: PCY1A_RAT (Choline-phosphate cytidylyltransferase A OS=Rattus norvegicus GN=Pcyt1a PE=1 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 6.757e-62
Identity = 117/231 (50.65%), Postives = 156/231 (67.53%), Query Frame = 2
Query:  128 PSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMXXXXXXXXXXXXXXRVGEKIQTVAMHR----NEWVENADRWVAGFFEMF-EEGXIR 805
            P +RPVRVYADGI+DLFH GHAR+L QAK  FPNTYL+VG C+DE TH FKG TVM E+ERY++++HC++VDEV+ +APW +T EFL +H+IDFVAHD +PY  +S    DVY+ +K AG F  T+RT+GISTSDII RIV+DY+ Y  RNL RGY+ K+L VS++ EK+  +                +  E +Q V         +W E +  ++  F EMF  EG ++
Sbjct:   72 PCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPY--SSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGSFLEMFGPEGALK 300          
BLAST of CK934104 vs. ExPASy Swiss-Prot
Match: PCY1A_HUMAN (Choline-phosphate cytidylyltransferase A OS=Homo sapiens GN=PCYT1A PE=1 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 6.757e-62
Identity = 117/231 (50.65%), Postives = 156/231 (67.53%), Query Frame = 2
Query:  128 PSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMXXXXXXXXXXXXXXRVGEKIQTVAMHR----NEWVENADRWVAGFFEMF-EEGXIR 805
            P +RPVRVYADGI+DLFH GHAR+L QAK  FPNTYL+VG C+DE TH FKG TVM E+ERY++++HC++VDEV+ +APW +T EFL +H+IDFVAHD +PY  +S    DVY+ +K AG F  T+RT+GISTSDII RIV+DY+ Y  RNL RGY+ K+L VS++ EK+  +                +  E +Q V         +W E +  ++  F EMF  EG ++
Sbjct:   72 PCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPY--SSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGSFLEMFGPEGALK 300          
BLAST of CK934104 vs. ExPASy Swiss-Prot
Match: PCY1A_MOUSE (Choline-phosphate cytidylyltransferase A OS=Mus musculus GN=Pcyt1a PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 8.824e-62
Identity = 117/231 (50.65%), Postives = 156/231 (67.53%), Query Frame = 2
Query:  128 PSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMXXXXXXXXXXXXXXRVGEKIQTVAMHR----NEWVENADRWVAGFFEMF-EEGXIR 805
            P +RPVRVYADGI+DLFH GHAR+L QAK  FPNTYL+VG C+DE TH FKG TVM E+ERY++++HC++VDEV+ +APW +T EFL +H+IDFVAHD +PY  +S    DVY+ +K AG F  T+RT+GISTSDII RIV+DY+ Y  RNL RGY+ K+L VS++ EK+  +                +  E +Q V         +W E +  ++  F EMF  EG ++
Sbjct:   72 PCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPY--SSAGSDDVYKHIKDAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEEKSIDLIQKWEEKSREFIGSFLEMFGPEGALK 300          
BLAST of CK934104 vs. ExPASy Swiss-Prot
Match: PCY1A_CRIGR (Choline-phosphate cytidylyltransferase A OS=Cricetulus griseus GN=PCYT1A PE=2 SV=1)

HSP 1 Score: 234.572 bits (597), Expect = 5.720e-61
Identity = 116/231 (50.22%), Postives = 154/231 (66.67%), Query Frame = 2
Query:  128 PSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRVNMXXXXXXXXXXXXXXRVGEKIQTVAMHR----NEWVENADRWVAGFFEMF-EEGXIR 805
            P +RPVRVYADGI+DLFH GHAR+L QAK  FPNTY +VG C+DE TH FKG TVM E+ERY++++HC++VDEV+ +APW +T EFL +H+IDFVAHD +PY  +S    DVY+ +K AG F  T+RT+GISTSDII RIV+DY+ Y  RNL RGY+ K+L VS++ EK+  +                +  E +Q V          W E +  ++  F EMF  EG ++
Sbjct:   72 PCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYPIVGVCSDELTHNFKGFTVMNENERYDAVQHCRYVDEVVRNAPWTLTPEFLAEHRIDFVAHDDIPY--SSAGSDDVYKHIKEAGMFAPTQRTEGISTSDIITRIVRDYDVYARRNLQRGYTAKELNVSFINEKKYHLQERVDKVKKKVKDVEEKSKEFVQKVEERSIDLIQTWEEKSREFIGSFLEMFGPEGALK 300          
BLAST of CK934104 vs. ExPASy Swiss-Prot
Match: PCY1_SCHPO (Probable choline-phosphate cytidylyltransferase OS=Schizosaccharomyces pombe GN=SPCC1827.02c PE=1 SV=3)

HSP 1 Score: 230.335 bits (586), Expect = 1.079e-59
Identity = 110/172 (63.95%), Postives = 135/172 (78.49%), Query Frame = 2
Query:  128 PSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYA-DASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRL 640
            P  RPVRVYADG++DLFH GH R LEQAKK FPN +L+VG  ND+ TH+ KG TVM + ER E+LRHCKWVDEV+ +APWV+T EFL++H+IDFVAHD +PYA D SG   D+Y  VK  GKF  TKRT+G+STSD+I RI++DY+QYVMRNL RG +RK+L VS  K+  L
Sbjct:   97 PEGRPVRVYADGVFDLFHIGHMRQLEQAKKVFPNVHLIVGLPNDQLTHRLKGLTVMNDKERAEALRHCKWVDEVLENAPWVITPEFLEEHKIDFVAHDDIPYASDDSG---DIYLPVKKVGKFIPTKRTEGVSTSDLITRIIRDYDQYVMRNLARGVNRKELNVSLFKKNEL 265          
BLAST of CK934104 vs. ExPASy Swiss-Prot
Match: PCY1_YEAST (Choline-phosphate cytidylyltransferase OS=Saccharomyces cerevisiae GN=PCT1 PE=1 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 1.234e-55
Identity = 95/171 (55.56%), Postives = 134/171 (78.36%), Query Frame = 2
Query:  128 PSDRPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRL 640
            P+DRP+R+YADG++DLFH GH + LEQ KK+FPN  L+VG  +D+ THK KG TV+T+ +R E+L HC+WVDEV+P+APW VT EFL +H+ID+VAHD +PY  A     D+Y+ +K  GKF  T+RT+G+STSDII +I++DY++Y+MRN  RG +R++L VS++K+  L
Sbjct:   99 PTDRPIRIYADGVFDLFHLGHMKQLEQCKKAFPNVTLIVGVPSDKITHKLKGLTVLTDKQRCETLTHCRWVDEVVPNAPWCVTPEFLLEHKIDYVAHDDIPYVSAD--SDDIYKPIKEMGKFLTTQRTNGVSTSDIITKIIRDYDKYLMRNFARGATRQELNVSWLKKNEL 267          
BLAST of CK934104 vs. ExPASy Swiss-Prot
Match: PCY1_CAEEL (Putative choline-phosphate cytidylyltransferase OS=Caenorhabditis elegans GN=F08C6.2 PE=2 SV=2)

HSP 1 Score: 210.69 bits (535), Expect = 8.845e-54
Identity = 92/170 (54.12%), Postives = 127/170 (74.71%), Query Frame = 2
Query:  137 RPVRVYADGIYDLFHFGHARSLEQAKKSFPNTYLLVGCCNDETTHKFKGKTVMTEDERYESLRHCKWVDEVIPDAPWVVTQEFLDKHQIDFVAHDSLPYADASGAGKDVYEFVKAAGKFKETKRTDGISTSDIIMRIVKDYNQYVMRNLDRGYSRKDLGVSYVKEKRLRV 646
            RPVR+YADGIYDLFH GHA  L Q KK FPN YL+VG C D  THK+KG+TV +E+ERY+ +RHC++VDEV  +APW  T EFL   ++DF+AHD++PY   +   +D+YE  +  G F ET+RT+G+STSD++ RI++DY++YV RNL RGYS K+L V ++   + ++
Sbjct:   79 RPVRIYADGIYDLFHHGHANQLRQVKKMFPNVYLIVGVCGDRDTHKYKGRTVTSEEERYDGVRHCRYVDEVYREAPWFCTVEFLKNLKVDFIAHDAIPY--VAPGEEDLYEKFRREGMFLETERTEGVSTSDVVCRIIRDYDKYVRRNLQRGYSPKELNVGFLAASKYQI 246          
The following BLAST results are available for this feature:
BLAST of CK934104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
PCY1B_HUMAN4.999e-6554.91Choline-phosphate cytidylyltransferase B OS=Homo s... [more]
PCY1B_RAT2.481e-6454.46Choline-phosphate cytidylyltransferase B OS=Rattus... [more]
PCY1B_MOUSE2.481e-6454.46Choline-phosphate cytidylyltransferase B OS=Mus mu... [more]
PCY1A_RAT6.757e-6250.65Choline-phosphate cytidylyltransferase A OS=Rattus... [more]
PCY1A_HUMAN6.757e-6250.65Choline-phosphate cytidylyltransferase A OS=Homo s... [more]
PCY1A_MOUSE8.824e-6250.65Choline-phosphate cytidylyltransferase A OS=Mus mu... [more]
PCY1A_CRIGR5.720e-6150.22Choline-phosphate cytidylyltransferase A OS=Cricet... [more]
PCY1_SCHPO1.079e-5963.95Probable choline-phosphate cytidylyltransferase OS... [more]
PCY1_YEAST1.234e-5555.56Choline-phosphate cytidylyltransferase OS=Saccharo... [more]
PCY1_CAEEL8.845e-5454.12Putative choline-phosphate cytidylyltransferase OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_C10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934104 ID=CK934104; Name=CK934104; organism=Citrus sinensis; type=EST; length=871bp
GGGGGCAGCGAGAGTTAAGTTACTAAAATGAAATGAGAGAACTCTTCGAA
TCGAGGAGAACGCCAATAACAGCAGCGAAAAAATGAGTAACGCAAATTCG
AATAATTCAAATTCGACTGATACGGCGCCGTCTGATCGCCCCGTTAGAGT
CTACGCCGATGGGATCTACGATCTTTTCCATTTCGGCCACGCTCGCTCCC
TTGAACAAGCCAAGAAATCGTTTCCAAACACCTACCTCCTTGTCGGATGC
TGCAATGATGAAACTACTCATAAGTTTAAGGGCAAAACTGTTATGACAGA
GGATGAGCGCTACGAATCTCTTCGTCATTGCAAATGGGTGGATGAAGTCA
TCCCCGATGCACCTTGGGTGGTCACGCAAGAATTTCTTGACAAGCACCAG
ATTGACTTTGTGGCTCATGACTCCCTTCCTTATGCTGATGCCAGTGGTGC
CGGAAAAGATGTTTATGAATTTGTTAAAGCTGCTGGGAAGTTTAAGGAAA
CAAAACGAACTGATGGGATTTCAACATCAGACATTATTATGAGAATTGTT
AAAGACTATAACCAGTATGTGATGCGTAACTTGGATCGAGGATATTCAAG
AAAAGACCTTGGTGTTAGCTATGTAAAGGAAAAACGGCTGAGGGTTAACA
TGAAATTAAAGAAACTGCAAGAGAAAGTGAAACAACAACAAGAGCGTGTT
GGAGAAAAGATCCAAACCGTTGCAATGCATCGTAATGAGTGGGTGGAAAA
TGCTGATCGCTGGGTTGCTGGTTTCTTTGAGATGTTTGAAGAAGGTGNNA
TAAGATGGGCACAGCCATCAGGGATCNAATTCAAGAGCGATTAAGAGGGC
AGGGGTCGGGCAAGTATCTAC
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