CK934130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934130 vs. ExPASy Swiss-Prot
Match: FADS2_PONAB (Fatty acid desaturase 2 OS=Pongo abelii GN=FADS2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 3.753e-15 Identity = 52/173 (30.06%), Postives = 86/173 (49.71%), Query Frame = 3 Query: 3 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFV-----QDF-EVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVW-AHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKI 494 EE++ HN D W+ I KVY++T+W+ QHPGG + + AG+D TDAF A+HP + ++L L G QD + S+I++D+R L +F+ L + + + + V + W + L + +L Q+ ++ HD GH V PK+N + Sbjct: 24 EEIQKHNLRTDRWLVIDRKVYNITKWSIQHPGGQRVIGHYAGEDATDAFRAFHPDLEFVGKFLKPLLIGELAPEEPSQDHGKNSKITEDFRALRKTAEDMNLFKTNHVFFLLLLAHIIALESIAWFTVFYFGNGWISTLITAFVLATSQAQAGWLQHDYGHLSVYRKPKWNHL 196
BLAST of CK934130 vs. ExPASy Swiss-Prot
Match: FADS2_HUMAN (Fatty acid desaturase 2 OS=Homo sapiens GN=FADS2 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 4.901e-15 Identity = 57/184 (30.98%), Postives = 92/184 (50.00%), Query Frame = 3 Query: 3 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFV-----QDF-EVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESV-W---AHLGSG--------MLLGFLWIQSAYVGHDSGHYQVMTSPKFNKI 494 EE++ HN D W+ I KVY++T+W+ QHPGG + + AG+D TDAF A+HP + ++L L G QD + S+I++D+R L +F K HV F++++ ++ ES+ W + G+G +L Q+ ++ HD GH V PK+N + Sbjct: 24 EEIQKHNLRTDRWLVIDRKVYNITKWSIQHPGGQRVIGHYAGEDATDAFRAFHPDLEFVGKFLKPLLIGELAPEEPSQDHGKNSKITEDFRALRKTAEDMNLF-KTNHV----------FFLLLLAHIIALESIAWFTVFYFGNGWIPTLITAFVLATSQAQAGWLQHDYGHLSVYRKPKWNHL 196
BLAST of CK934130 vs. ExPASy Swiss-Prot
Match: FADS2_MACFA (Fatty acid desaturase 2 OS=Macaca fascicularis GN=FADS2 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 6.402e-15 Identity = 57/184 (30.98%), Postives = 91/184 (49.46%), Query Frame = 3 Query: 3 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFV-----QDF-EVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESV-W---AHLGSG--------MLLGFLWIQSAYVGHDSGHYQVMTSPKFNKI 494 EE++ HN D W+ I KVY++T+W+ QHPGG + + AG+D TDAF A+HP + ++L L G QD + S+I +D+R L +F K HV F++++ ++ ES+ W + G+G +L Q+ ++ HD GH V PK+N + Sbjct: 24 EEIQKHNLRTDRWLVIDRKVYNITKWSTQHPGGQRVIGHYAGEDATDAFRAFHPDLKFVGKFLKPLLIGELAPEEPSQDHGKNSKIIEDFRALKKTAEDMNLF-KTNHV----------FFLLLLAHIIALESIAWFTVFYFGNGWIPTLITAFVLATSQAQAGWLQHDYGHLSVYRKPKWNHL 196
BLAST of CK934130 vs. ExPASy Swiss-Prot
Match: FADS2_DANRE (Fatty acid desaturase 2 OS=Danio rerio GN=fads2 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 5.419e-14 Identity = 50/175 (28.57%), Postives = 84/175 (48.00%), Query Frame = 3 Query: 3 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAWQYLDKLFTGYFVQDFEVSEIS----------KDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVWAH-LGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKI 494 EE++ H K D W+ ++ KVY+V++W K+HPGG L + AG+D T+AF A+HP Q + K + + E SE S +D+R L +G F+ + + L + L+ + V + W + L ++L Q+ ++ HD GH V + N + Sbjct: 24 EEVQKHTKHGDQWVVVERKVYNVSQWVKRHPGGLRILGHYAGEDATEAFTAFHPNL--QLVRKYLKPLLIGELEASEPSQDRQKNAALVEDFRALRERLEAEGCFKTQPLFFALHLGHILLLEAIAFMMVWYFGTGWINTLIVAVILATAQSQAGWLQHDFGHLSVFKTSGMNHL 196
BLAST of CK934130 vs. ExPASy Swiss-Prot
Match: FADS2_XENLA (Fatty acid desaturase 2 OS=Xenopus laevis GN=fads2 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.577e-13 Identity = 51/184 (27.72%), Postives = 87/184 (47.28%), Query Frame = 3 Query: 3 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFVQDFEVSEISK------DYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESV-WA---HLGSG--------MLLGFLWIQSAYVGHDSGHYQVMTSPKFNKI 494 EE++ HN D W+ I+ KVY++++W K+HPGG + + AG+D TDAF A+HP + ++L L+ G ++ + K D+R L +F+ F+ ++ +L E + W +LG+G +LL Q+ ++ HD GH V K+N + Sbjct: 26 EEIQKHNLKTDKWLVIERKVYNISQWVKRHPGGMRIIGHYAGEDATDAFHAFHPDKTFVRKFLKPLYIGELAENEPSQDRDKNAQQVEDFRALRKTAEDMRLFKSN-----------PAFFIFYLFHILLIEFLAWCTLHYLGTGWIPAIITVLLLTISQAQAGWLQHDFGHLSVFEKSKWNHL 198
BLAST of CK934130 vs. ExPASy Swiss-Prot
Match: FADS2_BOVIN (Fatty acid desaturase 2 OS=Bos taurus GN=FADS2 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 4.588e-13 Identity = 46/173 (26.59%), Postives = 83/173 (47.98%), Query Frame = 3 Query: 3 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFVQD------FEVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVW-AHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKI 494 EE++ HN D W+ I KVY++T+W+ +HPGG + + AG+D TDAF+A+H + +++ L G + + S+I++D+R L +F+ Q L + M + + + + W + + +L Q+ ++ HD GH V +N I Sbjct: 24 EEIQKHNLRTDKWLVIDRKVYNITKWSSRHPGGQRVIGHYAGEDATDAFLAFHRNLDFVRKFMKPLLIGELAPEEPSQDRGKNSQITEDFRALRKTAEDMNLFKSNQLFFLLHLAHIIAMESIAWFTLFYFGNGWIPTIITAFVLATSQAQAGWLQHDYGHLSVYKKSMWNHI 196
BLAST of CK934130 vs. ExPASy Swiss-Prot
Match: FADS1_PAPAN (Fatty acid desaturase 1 OS=Papio anubis GN=FADS1 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 7.825e-13 Identity = 50/178 (28.09%), Postives = 90/178 (50.56%), Query Frame = 3 Query: 3 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYH--PGTAWQYLDKLFTGYFVQD---FEVS---EISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGV------LCCESVWAHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKI 494 +E+ + E+ W+ I KVYD++E+ ++HPGG + + AGQD TD F+A+H G +Y++ L G + FE + E++ ++R L + G+ K HV + L+ ++++ G + S L +LL IQ+ ++ HD GH V ++ K+N + Sbjct: 23 DEVAQRSGCEERWLVIDRKVYDISEFTRRHPGGSRVISHYAGQDATDPFVAFHSNKGLVKKYMNSLLIGELSPEQPSFEPTKNKELTDEFRELRATVEQMGLM-KANHV----FFLLYLLHILLLDGAAWLTLWIFGTSFLPFLLCAVLLTAAQIQAGWLQHDLGHLSVFSTSKWNHL 195
BLAST of CK934130 vs. ExPASy Swiss-Prot
Match: FADS3_BOVIN (Fatty acid desaturase 3 OS=Bos taurus GN=FADS3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.335e-12 Identity = 46/175 (26.29%), Postives = 83/175 (47.43%), Query Frame = 3 Query: 3 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAW--QYLDKLFTGYFVQDF------EVSEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESVWA-HLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKIAQ 500 E++R HN D W+ I+ +VYD++ WA++HPGG + + +D TDAF A+H ++ ++L L G + + +++ +D+R L +FE K L + M V+ + W + ++L QS + HD GH + + ++N +AQ Sbjct: 24 EQVRRHNLPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFHAFHQDLSFVRKFLQPLLIGELAPEEPSQDGPQNTQLIEDFRALRQAVEDMKLFEAKPAFFGLLLGHILAMEVLAWLMIYMLGPGWVPSTLAALILAISQAQSWCLQHDLGHTSIFRNSRWNHLAQ 198
BLAST of CK934130 vs. ExPASy Swiss-Prot
Match: FADS2_RAT (Fatty acid desaturase 2 OS=Rattus norvegicus GN=Fads2 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.974e-12 Identity = 54/191 (28.27%), Postives = 89/191 (46.60%), Query Frame = 3 Query: 3 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYHPGTAWQYLDKLFTGYFVQDFEV---------------SEISKDYRRLYIEFAKQGMFEKKQHVASCALTCVALMFVVVVYGVLCCESV-W---AHLGSG--------MLLGFLWIQSAYVGHDSGHYQVMTSPKFNKI 494 EE++ HN D W+ I KVY+VT+W+++HPGG + + +G+D TDAF A+H LD F G F++ + S+I++D+R L +F K H L F +++ ++ ES+ W ++ G+G +L Q+ ++ HD GH V +N I Sbjct: 24 EEIQKHNLRTDRWLVIDRKVYNVTKWSQRHPGGHRVIGHYSGEDATDAFRAFH-------LDLDFVGKFLKPLLIGELAPEEPSLDRGKSSQITEDFRALKKTAEDMNLF-KTNH----------LFFFLLLSHIIVMESIAWFILSYFGNGWIPTVITAFVLATSQAQAGWLQHDYGHLSVYKKSIWNHI 196
BLAST of CK934130 vs. ExPASy Swiss-Prot
Match: FADS1_HUMAN (Fatty acid desaturase 1 OS=Homo sapiens GN=FADS1 PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 2.974e-12 Identity = 47/177 (26.55%), Postives = 87/177 (49.15%), Query Frame = 3 Query: 3 EELRTHNKAEDLWISIQGKVYDVTEWAKQHPGGDVPLLNLAGQDVTDAFIAYH--PGTAWQYLDKLFTGYFVQD---FEVS---EISKDYRRLYIEFAKQGMFEKKQ-----HVASCALTCVALMFVVVVYGVLCCESVWAHLGSGMLLGFLWIQSAYVGHDSGHYQVMTSPKFNKI 494 +E+ + E+ W+ I KVY+++E+ ++HPGG + + AGQD TD F+A+H G +Y++ L G + FE + E++ ++R L + G+ + ++ L A + V+G S L +LL + Q+ ++ HD GH V ++ K+N + Sbjct: 23 DEVAQRSGCEERWLVIDRKVYNISEFTRRHPGGSRVISHYAGQDATDPFVAFHINKGLVKKYMNSLLIGELSPEQPSFEPTKNKELTDEFRELRATVERMGLMKANHVFFLLYLLHILLLDGAAWLTLWVFGT----SFLPFLLCAVLLSAVQAQAGWLQHDFGHLSVFSTSKWNHL 195 The following BLAST results are available for this feature:
BLAST of CK934130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934130 ID=CK934130; Name=CK934130; organism=Citrus sinensis; type=EST; length=510bpback to top |