CK934172

Overview
NameCK934172
Unique NameCK934172
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10290 contig Csv1_Contig10290:340..1077. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CK934172 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 69.3218 bits (168), Expect = 2.416e-11
Identity = 62/206 (30.10%), Postives = 96/206 (46.60%), Query Frame = 2 
Query:   11 ILEMTTKPQLGASES--EXXLDVYGNQVDSSHRYYLVSALWGVKTGGGISADKGK-NGQ--CPTDVIQLSPKDKRGKNLVLLP-NDNSIIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK------TCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSTPVNGSCDTLCKDVGV-SNVDGVQRLVVVD 589
            +L     P L A++S     LD+ G ++ +   YY+V  L     GGG++      NG   CP  V+Q   +    + L   P N    +VR ST++ + FS     +  +  ++W++D  + S G+ F+TIG  K      T  + FK+E+   S F           YK+V C T V GSC   C DVG+  +  G +RL + D
Sbjct:   17 LLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRD--HGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSS-TVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGF-----------YKLVFCPT-VCGSCKVKCGDVGIYIDQKGRRRLALSD 207
The following BLAST results are available for this feature:
BLAST of CK934172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MIRA_RICDU2.416e-1130.10Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
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Properties
Property NameValue
Genbank descriptionCGF1004540_D12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_D12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934172 ID=CK934172; Name=CK934172; organism=Citrus sinensis; type=EST; length=738bp
TCTCCTTCCAATTTTGGAAATGACCACAAAACCTCAGTTGGGCGCCTCAG
AATCTGAANNNNNNTTAGATGTCTATGGCAACCAGGTGGACTCCAGCCAC
AGGTATTATCTTGTCTCAGCACTCTGGGGAGTTAAAACCGGCGGTGGAAT
TAGCGCGGACAAAGGCAAAAATGGACAGTGTCCAACGGATGTTATCCAAT
TAAGTCCTAAGGACAAAAGGGGAAAGAATTTAGTTTTACTTCCGAATGAC
AATTCCATAATTGTCCGGGAGTCCACTAATATTAAATTGAAATTCTCAAG
AGTTTCTTCTCTTCAGCAGTGTAACAAAGATTCGTTGTGGAAAGTTGACA
ACGATAACGCTTCATTAGGAAAGCAGTTTATAACAATCGGTGAAGGTAAA
ACGTGTCAAAATTTGTTTAAACTTGAGAAAGTTAGTGCATCAATATTTGA
TATGAAAATAGCACTAGACATTCCCTGTCTATACAAAATTGTTCATTGTT
CAACACCTGTTAATGGTTCTTGTGATACACTCTGCAAAGACGTTGGCGTT
TCTAATGTGGATGGCGTCCAACGTCTAGTTGTGGTTGATGATAATGATCA
GCCAAATCTGCCTTTGCCTGTTGTGTTATTTCCAGCTGATAGTGGAAGAT
CTATGTTATTTCCGTCTCTGTAATGAATAAGCCAGCAGGCTGTATTATTC
TAAATAATGGACCAGGCTAGTACTCTTTAATCTGTATG
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