CK934317

Overview
NameCK934317
Unique NameCK934317
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1672 contig Csv1_Contig1672:1..879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934317 vs. ExPASy Swiss-Prot
Match: N6MT2_HUMAN (N(6)-adenine-specific DNA methyltransferase 2 OS=Homo sapiens GN=N6AMT2 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.967e-46
Identity = 95/212 (44.81%), Postives = 129/212 (60.85%), Query Frame = 2
Query:  107 PMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDXXXXXXXXXXXXSLCSDSDSRVACIACPTLYAYLKKI-RPEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELK-HAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPQHSSKLGNEFRLFTNYNPGTRLG 736
            P LS+ ALAALQEF +EQ Q  E      E D   + ++ E+W+LSQFWY             +   +   R+AC++ P++Y  L+++ R   S  I EYD RF  YG +F FYDYN P DLP  +  H+F +V+ DPPYLS+ECL K SETV +L R    K+LL TG + +E+AAELLG++ C F P+H+  L NEFR + NY+ G   G
Sbjct:   10 PQLSAHALAALQEFYAEQKQQIEPG----EDDKYNIGIIEENWQLSQFWYSQETALQLAQEAIAAVGEG-GRIACVSAPSVYQKLRELCRENFSIYIFEYDKRFAMYGEEFIFYDYNNPLDLPERIAAHSFDIVIADPPYLSEECLRKTSETVKYLTR---GKILLCTGAIMEEQAAELLGVKMCTFVPRHTRNLANEFRCYVNYDSGLDCG 213          
BLAST of CK934317 vs. ExPASy Swiss-Prot
Match: N6MT2_MOUSE (N(6)-adenine-specific DNA methyltransferase 2 OS=Mus musculus GN=N6amt2 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 4.450e-45
Identity = 95/208 (45.67%), Postives = 128/208 (61.54%), Query Frame = 2
Query:  107 PMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDXXXXXXXXXXXXSLCSDSDSRVACIACPTLYAYLKKI-RPEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELK-HAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPQHSSKLGNEFRLFTNYNPG 724
            P LSS  LAALQEF +EQ Q+     N    D   V ++ E+W+LSQFWY                 +   R+AC++ P++Y  L+++ R + S  I EYD RF  YG +F FYDYN P +LP  +  H+F +VV DPPYLS+ECL K SET+ FL R    K+LL TG + +E+AA+LLG++ C F P+HS  L NEFR +TNY+ G
Sbjct:   10 PQLSSHTLAALQEFYAEQKQSV----NPRGDDKYNVGVIEENWQLSQFWYSQDTALRLAREAIDAAGEG-GRIACVSAPSVYQKLRELCREDSSVYIFEYDRRFAIYGDEFIFYDYNHPLELPERIAAHSFDLVVADPPYLSEECLRKTSETIQFLTR---GKILLCTGAIMEEQAAQLLGVKMCKFIPEHSRNLANEFRCYTNYDSG 209          
BLAST of CK934317 vs. ExPASy Swiss-Prot
Match: N6MT2_BOVIN (N(6)-adenine-specific DNA methyltransferase 2 OS=Bos taurus GN=N6AMT2 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.426e-44
Identity = 94/208 (45.19%), Postives = 126/208 (60.58%), Query Frame = 2
Query:  107 PMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDXXXXXXXXXXXXSLCSDSDSRVACIACPTLYAYLK-KIRPEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELK-HAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPQHSSKLGNEFRLFTNYNPG 724
            P LSS ALAALQEF +EQ        +    D   + ++ E+W+LSQFWY             +   +   R+AC++ P++Y  L+ + R +VS  I EYD RF  YG DF +YDY  P DLP  +  H+F +VV DPPYLS+ECL K+SET+  L R    K+LL TG V ++ AA+LLG++ C F P+H+  LGNEFR F NYN G
Sbjct:   10 PQLSSYALAALQEFYAEQQHHHS---DLCGDDKYNIGIIEENWQLSQFWYSPETATCLAEDAVAAAGEG-GRIACVSAPSVYQKLRERHRDDVSVCIFEYDRRFAIYGEDFVYYDYKNPVDLPERIATHSFDIVVADPPYLSEECLRKMSETIKLLTR---GKILLCTGAVMEDAAAKLLGVKMCKFIPEHTRTLGNEFRCFVNYNSG 210          
BLAST of CK934317 vs. ExPASy Swiss-Prot
Match: N6MT2_XENLA (N(6)-adenine-specific DNA methyltransferase 2 OS=Xenopus laevis GN=n6amt2 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.212e-42
Identity = 91/205 (44.39%), Postives = 128/205 (62.44%), Query Frame = 2
Query:  107 PMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDXXXXXXXXXXXXSLCSDSDSRVACIACPTLYAYLKKIRPE-VSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELK-HAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPQHSSKLGNEFRLFTNY 715
            P LSS ALAALQEF +EQ Q  E  +   + +   V  V EDW+LSQFWY              +C ++  R+ACI+ P++Y  L+ +  E V  ++LEYD RF  YG DF FYDYN+P  LP  L+  +F +V+ DPPYLS+ECL+  ++T+  L+R    K++L TG V ++ AA+ LGL+ C F P+H+  L NEFR ++NY
Sbjct:   11 PQLSSHALAALQEFYAEQQQR-EAQKLGPDHEKFSVGSVEEDWQLSQFWYSDETALSLAKEAIEVCGEN-GRIACISAPSIYQKLRGLAGESVYIRLLEYDNRFAVYGDDFVFYDYNEPLKLPESLEPSSFDIVIADPPYLSEECLQNTAQTIKHLSR---GKIILCTGAVMEDLAAQKLGLKKCKFIPEHTRNLANEFRCYSNY 210          
BLAST of CK934317 vs. ExPASy Swiss-Prot
Match: N6MT2_CHICK (N(6)-adenine-specific DNA methyltransferase 2 OS=Gallus gallus GN=N6AMT2 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.650e-41
Identity = 91/208 (43.75%), Postives = 124/208 (59.62%), Query Frame = 2
Query:  107 PMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDXXXXXXXXXXXXSLCSDSDSRVACIACPTLYAYLKKIR-PEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLEL-KHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPQHSSKLGNEFRLFTNYNPG 724
            P LSS  LAALQEF  EQ Q  E  +     +   V  + EDW+LSQFWY              + +    R+AC++ P++Y  L++    + S  ILEYD RF  YG +F FYDYN P +LP  L  H+F +VV DPPYLS+ECL+K +ET+ +L +    K+LL TG + +E+AA+ LG++ C F P+HS  L NEFR + NY  G
Sbjct:    9 PQLSSHTLAALQEFYLEQQQR-EGMKTSQGFNQYSVGSIEEDWQLSQFWYSDETASCLANEAI-VAAGKGGRIACVSAPSVYQKLREQGGADFSVCILEYDRRFSVYGEEFIFYDYNNPLNLPEHLLPHSFDIVVADPPYLSEECLQKTAETIKYLTK---GKILLCTGAIMEEQAAKHLGVKICKFIPKHSRNLANEFRCYVNYASG 211          
BLAST of CK934317 vs. ExPASy Swiss-Prot
Match: N6MT2_DANRE (N(6)-adenine-specific DNA methyltransferase 2 OS=Danio rerio GN=n6amt2 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.177e-29
Identity = 68/164 (41.46%), Postives = 95/164 (57.93%), Query Frame = 2
Query:  239 LSQFWYDXXXXXXXXXXXXSLCSDSDSRVACIACPTLYAYLKKIRPE----VSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLEL-KHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPQHSSKLGNEFRLFTNY 715
            +SQFWY                 +   R+AC++ P++Y  LK++       VS  +LE+D RF  YG +F FYDYN P  LP +L   +F +V+ DPPYLS+ECL KV+ TV  L +    K+LL TG + +E A +LL L+ C F P+H+  L NEFR + NY
Sbjct:    1 MSQFWYSEETASRLAEELLQQAGEH-GRIACLSAPSVYQKLKQLESVRSDGVSAVLLEFDRRFAAYGDEFVFYDYNNPLCLPEDLLPQSFDIVIADPPYLSEECLSKVTLTVKHLTK---GKILLCTGAIMEEHAGKLLDLKMCSFLPRHNHNLANEFRCYVNY 160          
BLAST of CK934317 vs. ExPASy Swiss-Prot
Match: N6MT2_CAEEL (N(6)-adenine-specific DNA methyltransferase 2 homolog OS=Caenorhabditis elegans GN=M142.8 PE=2 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.537e-29
Identity = 70/212 (33.02%), Postives = 111/212 (52.36%), Query Frame = 2
Query:  107 PMLSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDXXXXXXXXXXXXSLCSDSD----SRVACIACPTLYAYLKKIRP----EVSPKILEYDMRFE-QYGSDFAFYDYNQPQDLPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELLGLRPCGFRPQHSSKLGNEFRLFTNY 715
            P LS+  LAAL  F +EQ +  E  Q      S  +  + EDW+LSQFWYD            +   +      +R+ C++ PTL  +  +       ++   + E+D RF  ++ ++F  YDY  P DLP EL   F V++ DPP+L+ ECL K + ++  L +  D K+LL TG + ++ A+ L+ +    F P+H++ L N+F  F NY
Sbjct:    8 PQLSADTLAALSMFQAEQQEKIEQLQ------SGIIEKIDEDWQLSQFWYDDETSRKLVAEGVAAALEGSEARPARIGCVSSPTLVKFFHETEEYKTGQIQLTLFEFDDRFGLKFPTEFVHYDYKHPTDLPAELLAKFDVIIADPPFLAAECLIKTAHSIRLLGK-SDVKVLLCTGAIMEDYASRLMAMHRTSFEPRHANNLANDFSCFANY 212          
BLAST of CK934317 vs. ExPASy Swiss-Prot
Match: N6MT2_DROME (N(6)-adenine-specific DNA methyltransferase 2 homolog OS=Drosophila melanogaster GN=CG9154 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 2.007e-29
Identity = 74/211 (35.07%), Postives = 113/211 (53.55%), Query Frame = 2
Query:  113 LSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDXXXXXXXXXXXXSLCSD-----SDSRVACIACPTLYAYLKKIRPEVSPKILEYDMRFEQYGSDFAFYDYNQPQDLPLELK---HAFSVVVVDPPYLSKECLEKVSETVSFLAR-PGDSKLLLLTGEVQKERAAELLGLRPCGFRPQHSSKLGNEFRLFTNYN 718
            L +  LA L EFL E+++     +N+  + + + A   EDW+LSQFWY              L ++      D  +A ++CP+LY  +++I   V   I E+D RFE YG+DF  YD N     P  LK     + ++V DPP+LS+EC+ K  E ++ L R   +SK++L +GEV +      L +  C FRP+H   LGN+F  + N+N
Sbjct:    7 LPADTLAILNEFLLERSKREAEEENQIANKTGKDAQFEEDWQLSQFWYSTETKHALRDVVRKLLAERTEDSGDFSIALLSCPSLYKDIREIHDTV--HIFEFDKRFEAYGTDFVHYDLNCVGSNPDYLKEHHQQYDLIVADPPFLSQECIAKTCEIITRLQRNQKESKVILCSGEVVEPWLTARLPVLKCSFRPEHERNLGNKFVSYANFN 215          
BLAST of CK934317 vs. ExPASy Swiss-Prot
Match: N6MT2_DICDI (N(6)-adenine-specific DNA methyltransferase 2 homolog OS=Dictyostelium discoideum GN=DDB_G0272708 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.031e-25
Identity = 73/205 (35.61%), Postives = 114/205 (55.61%), Query Frame = 2
Query:  113 LSSQALAALQEFLSEQNQTSETAQNKTESDSDEVALVSEDWRLSQFWYDXXXXXXXXXXXXSLCSDSDSRVACIACPTLYAYLKKIRPEV-SPKILEYDMRFEQYGSDFAFYDYNQPQD-LPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDSKLLLLTGEVQKERAAELL-GLRPCGFRPQHSSKLGNEFRLFTNYN 718
            LS ++L+ALQ+F   +       Q+K E        +SEDW+LSQFWY+                  +  V C++ P++Y  L K    + +  + EYD RF+ YG  F FYDYN P+D +  +LK     + +DPP+LS+EC+EKV++T++ L +P  ++LLLLTG +Q     + L  +  C F P+H  +L N+F   +NY+
Sbjct:   11 LSKESLSALQDFYKSREVEQ---QDKFE--------ISEDWQLSQFWYEEETSKFVANVIEQETIGGNV-VVCLSTPSIYKVLHKNNNLLLNNNLFEYDKRFDVYGEKFHFYDYNNPEDGISEQLKGNVDYICLDPPFLSEECIEKVAKTIALLRKP-TTRLLLLTGRIQWNNIQKYLPEMMICEFEPKH-PRLQNDFFCCSNYH 201          
BLAST of CK934317 vs. ExPASy Swiss-Prot
Match: AML1_YEAST (N(6)-adenine-specific DNA methyltransferase-like 1 OS=Saccharomyces cerevisiae GN=AML1 PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.260e-23
Identity = 76/227 (33.48%), Postives = 116/227 (51.10%), Query Frame = 2
Query:  113 LSSQALAALQEFLSEQNQTSETAQ---NKTESD------SDEVALVSEDWRLSQFWYDXXXXXXXXXXXXSLCSDSDSRVACIACPTLYAYLKKIRPEVSPK----ILEYDMRFEQY-GSD-FAFYDYNQPQDLPLELKHAFSVVVVDPPYLSKECLEKVSETVSFLARPGDS----------KLLLLTGEVQKERAAELLG-LRPCGFRPQHSSKLGNEFRLFTNY 715
            LS+ ALAAL+EF  E+ Q  E  Q   ++T+ D       + + L  EDW+LSQFWY                +D ++ +A ++ P++YA ++K      P     + E+D RFE   G D F FYDYN+P D   E+K     +++DPP+L+++C  K S T   L  P D+          +L+  TGE   E  +++    R   F P+HS+ L NEFR + N+
Sbjct:   14 LSANALAALEEFKREEQQHQEAFQKLYDETDEDFQKKKKEEGMKLFKEDWQLSQFWYSDDTAAILADAILE-GADENTVIAIVSAPSVYAAIQKKPTNEIPTEHIYLFEFDKRFELLAGRDHFFFYDYNKPLDFSDEIKGKVDRLLIDPPFLNEDCQTKSSITAKCLLAPNDNSKTKKGVFKHRLISCTGERMSEVISKVYSDTRITTFLPEHSNGLSNEFRCYANF 239          
The following BLAST results are available for this feature:
BLAST of CK934317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
N6MT2_HUMAN8.967e-4644.81N(6)-adenine-specific DNA methyltransferase 2 OS=H... [more]
N6MT2_MOUSE4.450e-4545.67N(6)-adenine-specific DNA methyltransferase 2 OS=M... [more]
N6MT2_BOVIN6.426e-4445.19N(6)-adenine-specific DNA methyltransferase 2 OS=B... [more]
N6MT2_XENLA1.212e-4244.39N(6)-adenine-specific DNA methyltransferase 2 OS=X... [more]
N6MT2_CHICK6.650e-4143.75N(6)-adenine-specific DNA methyltransferase 2 OS=G... [more]
N6MT2_DANRE1.177e-2941.46N(6)-adenine-specific DNA methyltransferase 2 OS=D... [more]
N6MT2_CAEEL1.537e-2933.02N(6)-adenine-specific DNA methyltransferase 2 homo... [more]
N6MT2_DROME2.007e-2935.07N(6)-adenine-specific DNA methyltransferase 2 homo... [more]
N6MT2_DICDI1.031e-2535.61N(6)-adenine-specific DNA methyltransferase 2 homo... [more]
AML1_YEAST1.260e-2333.48N(6)-adenine-specific DNA methyltransferase-like 1... [more]
back to top
Properties
Property NameValue
Genbank descriptionCGF1004260_D09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_D09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934317 ID=CK934317; Name=CK934317; organism=Citrus sinensis; type=EST; length=879bp
GGGACAGCAGCCGCGGCAGCCAAAAGTAACCAAAATGGAGGAGCTCAAAG
AAAACAAAATGCACCTAAAAAACGACGACGTTGAAGTCGAAGAGGATGAT
GACCGGCCGATGCTGAGCTCTCAAGCTTTGGCAGCTCTTCAGGAATTCCT
TTCAGAACAAAACCAAACTTCGGAAACTGCTCAAAATAAAACAGAATCAG
ACTCAGATGAGGTGGCGTTAGTGTCGGAGGACTGGAGGCTGAGCCAGTTC
TGGTACGACGCTGTGACGGCAGAGACTGTAGCTCAAGAAGCCGTTTCTCT
TTGTAGTGATTCCGATTCTCGCGTTGCCTGTATTGCTTGCCCCACGCTCT
ACGCTTACTTAAAGAAAATTAGACCTGAGGTGTCGCCGAAAATACTTGAA
TACGACATGCGTTTTGAGCAATACGGAAGTGATTTTGCGTTTTATGATTA
TAATCAACCGCAAGATTTGCCATTGGAGCTCAAGCATGCTTTCAGTGTTG
TTGTCGTAGATCCACCTTATCTGAGCAAGGAGTGTCTGGAGAAAGTAAGT
GAAACAGTTTCTTTTCTTGCTAGACCAGGGGATTCGAAGTTGCTTCTACT
CACAGGTGAGGTGCAGAAGGAGAGAGCTGCAGAGCTTTTAGGTTTGCGTC
CGTGTGGTTTTAGACCACAGCACTCTAGCAAACTTGGGAATGAATTTCGA
CTATTCACAAACTACAACCCGGGTACGAGATTAGGAGGGTGGGAGCAAGA
GAACTAGGTGCATGTTGCTTTCTACAACTGGACTAATATGTTACCCGGCC
AATGATTTGATTACAGTTTCTTATTTTAGCTGCAAAAACTAAGATGATGG
TGGGGGGCTTTCACTTTCGAGTTGTAATT
back to top