CK934450

Overview
NameCK934450
Unique NameCK934450
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length870
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1686 contig Csv1_Contig1686:1..870. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK934450 vs. ExPASy Swiss-Prot
Match: UPTG_PEA (Alpha-1,4-glucan-protein synthase [UDP-forming] OS=Pisum sativum GN=UPTG PE=1 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.154e-37
Identity = 71/135 (52.59%), Postives = 99/135 (73.33%), Query Frame = 3 
Query:  468 EVDIVIAALQSDLTSFLNAWRPLFSRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGPTTSIV-FSGYSCRYFGYLVSRKKYIISVDDDCLPAKDNDGKLTNAVSQHLANLTTPATPFFFNTLYDPFREG 869
            E+DIVI  +++    FL  WRP F ++HLIIVQD D    +K+P+GFD+ +Y ++DI++++GP  S + F   +CR FGY+VS+KKYI ++DDDC  AKD  G   NA+ QH+ NL +P+TPFFFNTLYDP+REG
Sbjct:   14 ELDIVIPTIRN--LDFLEMWRPFFEQYHLIIVQDGDPSKVIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPTGHEINALEQHIKNLLSPSTPFFFNTLYDPYREG 146
[Close]
BLAST of CK934450 vs. ExPASy Swiss-Prot
Match: UPTG_MAIZE (Alpha-1,4-glucan-protein synthase [UDP-forming] OS=Zea mays GN=UPTG PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 4.385e-37
Identity = 71/135 (52.59%), Postives = 98/135 (72.59%), Query Frame = 3 
Query:  468 EVDIVIAALQSDLTSFLNAWRPLFSRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGPTTSIV-FSGYSCRYFGYLVSRKKYIISVDDDCLPAKDNDGKLTNAVSQHLANLTTPATPFFFNTLYDPFREG 869
            E+DIVI  +++    FL  WR  F  +HLIIVQD D    +K+P+GFD+ +Y ++DI++++GP  S + F   +CR FGY+VS+KKYI ++DDDC  AKD  GK  NA+ QH+ NL +P+TPFFFNTLYDP+REG
Sbjct:   21 ELDIVIPTIRN--LDFLEMWRAFFQPYHLIIVQDGDPTKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLSPSTPFFFNTLYDPYREG 153
[Close]
BLAST of CK934450 vs. ExPASy Swiss-Prot
Match: UPTG1_SOLTU (Alpha-1,4-glucan-protein synthase [UDP-forming] 1 OS=Solanum tuberosum GN=UPTG1 PE=1 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 1.666e-36
Identity = 70/135 (51.85%), Postives = 97/135 (71.85%), Query Frame = 3 
Query:  468 EVDIVIAALQSDLTSFLNAWRPLFSRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGPTTSIV-FSGYSCRYFGYLVSRKKYIISVDDDCLPAKDNDGKLTNAVSQHLANLTTPATPFFFNTLYDPFREG 869
            E+DIVI  +++    FL  WRP F  +HLIIVQD D    +K+P+GFD+ +Y ++DI++++GP  S + F   +CR FGY+VS+KKYI ++DDDC  AKD  GK  NA+ QH+ NL  P+TP FFNTLYDP+R+G
Sbjct:   11 ELDIVIPTIRN--LDFLEMWRPFFQPYHLIIVQDGDPSKIIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHFFNTLYDPYRDG 143
[Close]
BLAST of CK934450 vs. ExPASy Swiss-Prot
Match: UPTG2_SOLTU (Alpha-1,4-glucan-protein synthase [UDP-forming] 2 OS=Solanum tuberosum GN=UPTG2 PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.842e-36
Identity = 70/135 (51.85%), Postives = 96/135 (71.11%), Query Frame = 3 
Query:  468 EVDIVIAALQSDLTSFLNAWRPLFSRFHLIIVQDPDLKGELKIPQGFDHRVYTKSDIDQVIGPTTSIV-FSGYSCRYFGYLVSRKKYIISVDDDCLPAKDNDGKLTNAVSQHLANLTTPATPFFFNTLYDPFREG 869
            E+DIVI  +++    FL  WRP F  +HLIIVQD D    + +P+GFD+ +Y ++DI++++GP  S + F   +CR FGY+VS+KKYI ++DDDC  AKD  GK  NA+ QH+ NL  P+TP FFNTLYDP+REG
Sbjct:   15 ELDIVIPTIRN--LDFLEMWRPFFQPYHLIIVQDGDPSKIINVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAKDPSGKDINALEQHIKNLLCPSTPHFFNTLYDPYREG 147
The following BLAST results are available for this feature:
BLAST of CK934450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
UPTG_PEA1.154e-3752.59Alpha-1,4-glucan-protein synthase [UDP-forming] OS... [more]
UPTG_MAIZE4.385e-3752.59Alpha-1,4-glucan-protein synthase [UDP-forming] OS... [more]
UPTG1_SOLTU1.666e-3651.85Alpha-1,4-glucan-protein synthase [UDP-forming] 1 ... [more]
UPTG2_SOLTU2.842e-3651.85Alpha-1,4-glucan-protein synthase [UDP-forming] 2 ... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004258_H07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_H07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934450 ID=CK934450; Name=CK934450; organism=Citrus sinensis; type=EST; length=870bp
GCGGGGGTGCAAGTTAAAATCGGACAAAAGTNNNGAACAATTCTTTCTCA
ATAAATGAATGAGAACCCCGCCATCTTTGCTGTCGTTAACTATAGATAAG
GCTGTTCTTAATCTCTCTCACATCTCCGATCTTTCTATTCTTCCTGATCA
CATCCTTCTAGATCTCTTTCTGAGAACATTAAATGCTGGAAAGCTTACAG
AGAAAGTTTTGAAGCTGTTCATTGCAACCGGAAAAGATGAAGTTCTTTTT
TTGATCCAGGCACTTAATATCAAGCATATCCTCACCCCTGTTCTCCCTAC
CAGATGTTCTGAGAAATTTTAAGACTTTCTTTTCTCTTTTTGGTGTATGG
TTGGTCGTATTTGAGGACATTTGAGCCAAACACGAGGTGGTTTTAGCAAA
CAATTTGTTGGTCTGAATTATCACTTTCAATTTCTGGGAGATGGCTTTAG
AACACATCGACGACAGTGAGGTTGACATCGTTATAGCAGCTCTGCAATCT
GACCTGACATCATTCCTAAATGCATGGAGACCGCTATTCTCCCGCTTCCA
CCTTATAATTGTCCAAGACCCTGATCTCAAAGGGGAACTCAAAATACCAC
AAGGTTTTGACCATCGTGTCTATACTAAGTCTGACATTGACCAAGTTATC
GGTCCTACCACATCCATTGTCTTCTCTGGTTATTCATGCAGGTACTTTGG
CTATCTGGTATCTAGAAAGAAATATATTATCTCTGTTGATGATGATTGCC
TTCCAGCAAAGGACAATGATGGCAAATTAACCAACGCCGTGAGCCAGCAT
CTTGCCAATCTTACAACACCAGCTACTCCTTTCTTCTTTAATACACTCTA
TGACCCTTTTCGGGAGGGAG
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