CK934535

Overview
NameCK934535
Unique NameCK934535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1694 contig Csv1_Contig1694:1..836. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934535 vs. ExPASy Swiss-Prot
Match: LPP2_ARATH (Lipid phosphate phosphatase 2 OS=Arabidopsis thaliana GN=LPP2 PE=2 SV=1)

HSP 1 Score: 415.231 bits (1066), Expect = 2.224e-115
Identity = 193/253 (76.28%), Postives = 211/253 (83.40%), Query Frame = 3
Query:   78 MPEIQLGAHTVRSHGLKVXXXXXXXXXXXXXXXXXXXXXXXXXPFHRFVGEDMMTDLRYPMKDNTVPFWAVPLIAILLPFIVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQGVFGGAIIGTIVSFFCYLQFFPPPYDTDG 836
            MPEI LGAHT+RSHG+ V                         PFHRFVGEDM+TDLRYP++DNT+PFWAVPLIA++LPF V+ VYYFIR DVYDLHHAILGLL+SVLITGVITDAIKDAVGRPRPDFFWRCFPDG G+F NVT+NV+CTG   V+KEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFD+RGHVAKLCIV LP L+AAL+GVSRVDDYWHHWQ VFGGAIIG  V+ FCYLQFFPPPYD DG
Sbjct:    1 MPEIHLGAHTIRSHGVTVARFHMHDWLILLLLIVIEIVLNVIEPFHRFVGEDMLTDLRYPLQDNTIPFWAVPLIAVVLPFAVICVYYFIRNDVYDLHHAILGLLFSVLITGVITDAIKDAVGRPRPDFFWRCFPDGIGIFHNVTKNVLCTGAKDVVKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDQRGHVAKLCIVILPLLVAALVGVSRVDDYWHHWQDVFGGAIIGLTVATFCYLQFFPPPYDPDG 253          
BLAST of CK934535 vs. ExPASy Swiss-Prot
Match: LPP3_ARATH (Putative lipid phosphate phosphatase 3, chloroplastic OS=Arabidopsis thaliana GN=LPP3 PE=2 SV=1)

HSP 1 Score: 356.295 bits (913), Expect = 1.226e-97
Identity = 163/254 (64.17%), Postives = 194/254 (76.38%), Query Frame = 3
Query:   75 KMPEIQLGAHTVRSHGLKVXXXXXXXXXXXXXXXXXXXXXXXXXPFHRFVGEDMMTDLRYPMKDNTVPFWAVPLIAILLPFIVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQGVFGGAIIGTIVSFFCYLQFFPPPYDTDG 836
            +M E QLG HT+RSHG+ V                         PF+RFVG+DMMTDL YP+K NTVP W+VP+ A+LLP ++    YF RRDVYDLHHA+LGLLYSVL+T V+TDAIK+AVGRPRPDFFWRCFPDGK ++D++  +V+C G   VI+EGHKSFPSGHTSWSF+GLGFLSLYLSGKI+ FD +GHVAKLCIV LP L AAL+G+SRVDDYWHHWQ VF G ++G  +S  CYLQFFPPPY T+G
Sbjct:   50 RMREAQLGGHTLRSHGMTVARTHMHDWIILVLLVILECVLLIIHPFYRFVGKDMMTDLSYPLKSNTVPIWSVPVYAMLLPLVIFIFIYFRRRDVYDLHHAVLGLLYSVLVTAVLTDAIKNAVGRPRPDFFWRCFPDGKALYDSLG-DVICHGDKSVIREGHKSFPSGHTSWSFSGLGFLSLYLSGKIQAFDGKGHVAKLCIVILPLLFAALVGISRVDDYWHHWQDVFAGGLLGLAISTICYLQFFPPPYHTEG 302          
BLAST of CK934535 vs. ExPASy Swiss-Prot
Match: LPP1_ARATH (Lipid phosphate phosphatase 1 OS=Arabidopsis thaliana GN=LPP1 PE=2 SV=2)

HSP 1 Score: 330.872 bits (847), Expect = 5.517e-90
Identity = 158/270 (58.52%), Postives = 194/270 (71.85%), Query Frame = 3
Query:   27 LFFRNPKEVSWFRD**KMPEIQLGAHTVRSHGLKVXXXXXXXXXXXXXXXXXXXXXXXXXPFHRFVGEDMMTDLRYPMKDNTVPFWAVPLIAILLPFIVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQGVFGGAIIGTIVSFFCYLQFFPPPYDTDG 836
            LF+RN ++    R   +M EI L  HT++SHG +V                         PF+R+VG+DMMTDL+YP KDNTVP W+VP+ A+LLP IV   +Y  R  VYDLHH+ILGLL++VLITGVITD+IK A GRPRP+F+WRCFPDGK ++D +   VVC G+   +KEGHKSFPSGHTSWSFAGL FLSLYLSGKI+ F+  GHVAKLC+V  P L A L+G+SRVDDYWHHWQ VF GA+IGT+V+ FCY QF+P PY  +G
Sbjct:   11 LFWRNSQDQEAQRG--RMQEIDLSVHTIKSHGGRVASKHKHDWIILVILIAIEIGLNLISPFYRYVGKDMMTDLKYPFKDNTVPIWSVPVYAVLLPIIVFVCFYLKRTCVYDLHHSILGLLFAVLITGVITDSIKVATGRPRPNFYWRCFPDGKELYDALG-GVVCHGKAAEVKEGHKSFPSGHTSWSFAGLTFLSLYLSGKIKAFNNEGHVAKLCLVIFPLLAACLVGISRVDDYWHHWQDVFAGALIGTLVAAFCYRQFYPNPYHEEG 277          
BLAST of CK934535 vs. ExPASy Swiss-Prot
Match: PPC1B_MOUSE (Phosphatidate phosphatase PPAPDC1B OS=Mus musculus GN=Ppapdc1b PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.599e-39
Identity = 89/213 (41.78%), Postives = 123/213 (57.75%), Query Frame = 3
Query:  207 PFHRFVGEDMMTDLRYP-MKDNTVPFWAVPLIAILLPFIVVHVYYFIRR-DVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVF--DRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQGVFGGAIIGTIVSFFCYLQFFPPPYDTD 833
            PF R +  + +   R P ++    P   + +IA L P  ++ +  F+R+ D  D   A L    ++ + GV T+ IK  VGRPRPDFF+RCFPDG    D     + CTG   V+ EG KSFPSGH+S++FAGL F S YL+GK+  F    RG   +LC    P L AA+I +SR  DY HHWQ V  G++IG   ++ CY Q++PP  D +
Sbjct:   28 PFQRRIQPEELWLYRNPYVEAEYFPTGRMFVIAFLTPLSLIFLAKFLRKADATDSKQACLAASLALALNGVFTNIIKLIVGRPRPDFFYRCFPDGLAHSD-----LTCTGDEDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRLCAFLSPLLFAAVIALSRTCDYKHHWQDVLVGSMIGMTFAYVCYRQYYPPLTDVE 235          
BLAST of CK934535 vs. ExPASy Swiss-Prot
Match: PPC1B_HUMAN (Phosphatidate phosphatase PPAPDC1B OS=Homo sapiens GN=PPAPDC1B PE=1 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.873e-38
Identity = 81/183 (44.26%), Postives = 111/183 (60.66%), Query Frame = 3
Query:  294 LIAILLPFIVVHVYYFIRR-DVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVF--DRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQGVFGGAIIGTIVSFFCYLQFFPPPYDTD 833
            +IA L P  ++ +  F+++ D  D   A L    ++ + GV T+ IK  VGRPRPDFF+RCFPDG    D     ++CTG   V+ EG KSFPSGH+S++FAGL F S YL+GK+  F    RG   + C    P L AA+I +SR  DY HHWQ V  G++IG   ++ CY Q++PP  D +
Sbjct:   21 VIAFLSPLSLIFLAKFLKKADTRDSRQACLAASLALALNGVFTNTIKLIVGRPRPDFFYRCFPDGLAHSD-----LMCTGDKDVVNEGRKSFPSGHSSFAFAGLAFASFYLAGKLHCFTPQGRGKSWRFCAFLSPLLFAAVIALSRTCDYKHHWQDVLVGSMIGMTFAYVCYRQYYPPLTDAE 198          
BLAST of CK934535 vs. ExPASy Swiss-Prot
Match: PPC1A_MOUSE (Phosphatidate phosphatase PPAPDC1A OS=Mus musculus GN=Ppapdc1a PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.752e-38
Identity = 87/212 (41.04%), Postives = 126/212 (59.43%), Query Frame = 3
Query:  207 PFHRFVGEDMMTDLRYPM-KDNTVPFWAVPLIAILLPFIVVHVYYFIRR-DVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDR--RGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQGVFGGAIIGTIVSFFCYLQFFPPPYDT 830
            PF R +  + +   + P+ + + +P   +  I+ L P  V+ V   IRR D  ++  A L +  ++ + GV T+ IK  VGRPRPDFF+RCFPDG  V ++  R   CTG   ++ EG KSFPS H+S++F+GLGF + YL+GK+  F    RG   +LC   LP   A +I +SR+ DY HHWQ  F G +IG I ++ CY Q +PP  +T
Sbjct:   26 PFQRVIQPEEIWLYKNPLVQSDNIPTRLMFAISFLTPLAVICVVKIIRRTDKTEIKEAFLAVSLALALNGVCTNTIKLIVGRPRPDFFYRCFPDG--VMNSEMR---CTGDPDLVSEGRKSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCAAILPLYCAMMIALSRMCDYKHHWQDSFVGGVIGLIFAYICYRQHYPPLANT 232          
BLAST of CK934535 vs. ExPASy Swiss-Prot
Match: PPC1A_HUMAN (Phosphatidate phosphatase PPAPDC1A OS=Homo sapiens GN=PPAPDC1A PE=1 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 4.901e-38
Identity = 85/212 (40.09%), Postives = 124/212 (58.49%), Query Frame = 3
Query:  207 PFHRFVGEDMMTDLRYPM-KDNTVPFWAVPLIAILLPFIVVHVYYFIRR-DVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDR--RGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQGVFGGAIIGTIVSFFCYLQFFPPPYDT 830
            PF R +  + +   + P+ + + +P   +  I+ L P  V+ V   IRR D  ++  A L +  ++ + GV T+ IK  VGRPRPDFF+RCFPDG      +   + CTG   ++ EG KSFPS H+S++F+GLGF + YL+GK+  F    RG   +LC   LP   A +I +SR+ DY HHWQ  F G +IG I ++ CY Q +PP  +T
Sbjct:   26 PFQRVIQPEEIWLYKNPLVQSDNIPTRLMFAISFLTPLAVICVVKIIRRTDKTEIKEAFLAVSLALALNGVCTNTIKLIVGRPRPDFFYRCFPDGV-----MNSEMHCTGDPDLVSEGRKSFPSIHSSFAFSGLGFTTFYLAGKLHCFTESGRGKSWRLCAAILPLYCAMMIALSRMCDYKHHWQDSFVGGVIGLIFAYICYRQHYPPLANT 232          
BLAST of CK934535 vs. ExPASy Swiss-Prot
Match: PPC1B_XENLA (Phosphatidate phosphatase PPAPDC1B OS=Xenopus laevis GN=ppapdc1b PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.862e-37
Identity = 84/190 (44.21%), Postives = 114/190 (60.00%), Query Frame = 3
Query:  273 VPFWAVPLIAILLPFIVVHVY-YFIRRDVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDR--RGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQGVFGGAIIGTIVSFFCYLQFFPPPYDTD 833
            +P  ++ LI+ L P  VV +   F + D  D   A L    S+ + G+ T+ +K  VGRPRPDF +RCFPDG+      +  + CTG   ++ EG KSFPSGH+S++FAGLGF +LYL+GK+R F    RGH  +LC   +P L A  I +SR  DY HHWQ V  GA IG   +F CY Q++P   + D
Sbjct:   14 IPTNSMFLISFLTPLSVVALARLFWKADGTDSREAGLAASLSLALNGIFTNTVKLIVGRPRPDFLFRCFPDGQE-----SPGLHCTGDPELVIEGRKSFPSGHSSFAFAGLGFTALYLAGKLRCFSPCGRGHSWRLCASLIPLLCAIAIALSRTCDYKHHWQDVVVGAFIGLFFAFLCYRQYYPSLVERD 198          
BLAST of CK934535 vs. ExPASy Swiss-Prot
Match: Y4367_DICDI (PA-phosphatase related-family protein DDB_G0284367 OS=Dictyostelium discoideum GN=DDB_G0284367 PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.199e-33
Identity = 80/208 (38.46%), Postives = 114/208 (54.81%), Query Frame = 3
Query:  207 PFHRFVGEDMMTD-----LRYPMKDNTVPFWAVPLIAILLPFIVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFPDGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDR-RGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQGVFGGAIIGTIVSFFCYLQFF 812
            PF R+  E  ++      ++YP+  + VP W + LIA+ LP +V   YY   R+ +D HHA LGL  +  IT + TD +K + GR RPD+  R                V TG   VI+EG  SFPSGH+S SF G+ FLS YL GK +VF +  G++ K  +   PF+++AL+ VSR  DY H +  +  G++IG  +  F Y   F
Sbjct:   42 PFKRYEPESNISTNTFQLVQYPLLPDIVPVWLLMLIALGLPMVVFIGYYIKNRNSHDFHHAALGLFQAFTITMLFTDILKVSAGRYRPDYGAR----------------VATGIEAVIREGRVSFPSGHSSVSFCGMTFLSFYLCGKTKVFLKDGGNILKALVCLCPFMISALVAVSRTVDYHHDFSDILAGSVIGLSIGVFVYFMNF 233          
BLAST of CK934535 vs. ExPASy Swiss-Prot
Match: DPP1_SCHPO (Probable diacylglycerol pyrophosphate phosphatase 1 OS=Schizosaccharomyces pombe GN=dpp1 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.443e-31
Identity = 74/209 (35.41%), Postives = 127/209 (60.77%), Query Frame = 3
Query:  207 PFHR-FVGEDMMTDLRYPMKDNTVPFWAVPLIAILLPFIVVHVYYFIRRDVYDLHHAILGLLYSVLITGVITDAIKDAVGRPRPDFFWRCFP----DGKGVFDNVTRNVVCTGQNHVIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKIRVFDRRGHVAKLCIVFLPFLLAALIGVSRVDDYWHHWQGVFGGAIIGTIVSFFCYLQFFPP 818
            PF R F  ED+     + + +  VP   + +I +  P +V++ +  +R +      +++GLLYS ++ G+    +K+AVGRPRPDF  RC P       G+ D ++ +V  + +  V+++G +SFPSGHTS+SFAGLGFL+++L+G++++F  +    K+ +  +P  +A+ IG+SR  DY HH + +  GA+ G  +++  Y Q FPP
Sbjct:   37 PFTRQFSLEDITISHPFALHEQ-VPTKYLGIICVFFPALVLYGFGKLRNNSLLFWKSLMGLLYSTMVCGLCVSLLKNAVGRPRPDFLARCQPFESTPKTGLVDVLSCSVPWSDK--VLQDGFRSFPSGHTSFSFAGLGFLAIFLAGQLKMFRNKTSSWKVVVPLVPLSIASWIGLSRSQDYRHHKEDIAVGALFGFAIAYVVYRQLFPP 242          
The following BLAST results are available for this feature:
BLAST of CK934535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
LPP2_ARATH2.224e-11576.28Lipid phosphate phosphatase 2 OS=Arabidopsis thali... [more]
LPP3_ARATH1.226e-9764.17Putative lipid phosphate phosphatase 3, chloroplas... [more]
LPP1_ARATH5.517e-9058.52Lipid phosphate phosphatase 1 OS=Arabidopsis thali... [more]
PPC1B_MOUSE2.599e-3941.78Phosphatidate phosphatase PPAPDC1B OS=Mus musculus... [more]
PPC1B_HUMAN2.873e-3844.26Phosphatidate phosphatase PPAPDC1B OS=Homo sapiens... [more]
PPC1A_MOUSE3.752e-3841.04Phosphatidate phosphatase PPAPDC1A OS=Mus musculus... [more]
PPC1A_HUMAN4.901e-3840.09Phosphatidate phosphatase PPAPDC1A OS=Homo sapiens... [more]
PPC1B_XENLA1.862e-3744.21Phosphatidate phosphatase PPAPDC1B OS=Xenopus laev... [more]
Y4367_DICDI6.199e-3338.46PA-phosphatase related-family protein DDB_G0284367... [more]
DPP1_SCHPO4.443e-3135.41Probable diacylglycerol pyrophosphate phosphatase ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004258_A03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_A03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934535 ID=CK934535; Name=CK934535; organism=Citrus sinensis; type=EST; length=836bp
GGGGAAAAAAACATTCTCGCTTTTACTTGTTTTTCAGAAATCCAAAAGAG
GTCAGCTGGTTCAGAGATTAGTGAAAAATGCCTGAGATTCAGTTGGGTGC
ACATACTGTAAGATCCCATGGACTTAAAGTTCTAAAGCTACACATGCACG
ACTGGCTGATTCTCTTGCTTCTTGGTGTAATAGAGATCATTTTGAATGTC
ATAGAACCATTTCACCGCTTTGTTGGAGAGGATATGATGACAGATTTGAG
ATACCCTATGAAAGACAATACCGTTCCCTTTTGGGCTGTTCCATTGATTG
CAATATTGCTCCCTTTTATTGTCGTGCATGTCTATTATTTCATCAGACGT
GATGTATATGATCTGCACCATGCCATACTAGGCCTTCTATATTCTGTGCT
CATTACTGGTGTTATAACTGATGCAATTAAAGATGCTGTTGGTCGTCCTC
GCCCAGATTTCTTTTGGCGGTGTTTTCCTGATGGTAAAGGGGTCTTTGAT
AATGTAACAAGGAACGTCGTGTGTACTGGGCAAAATCATGTTATTAAGGA
AGGGCACAAAAGTTTCCCAAGTGGACATACTTCGTGGTCTTTTGCTGGTC
TTGGTTTTCTTTCATTGTACTTGTCAGGAAAAATCAGGGTATTTGATCGT
AGAGGCCATGTTGCAAAGCTCTGTATTGTTTTCCTACCATTTCTTCTAGC
TGCTCTGATAGGAGTTTCTCGAGTTGATGACTATTGGCATCATTGGCAAG
GTGTCTTTGGTGGAGCTATCATAGGGACAATTGTTTCTTTCTTTTGTTAC
TTGCAATTCTTTCCACCTCCATATGATACAGATGGC
back to top