CK934576

Overview
NameCK934576
Unique NameCK934576
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length722
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10142 contig Csv1_Contig10142:7..728. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL117_ARATH (Germin-like protein subfamily 1 member 17 OS=Arabidopsis thaliana GN=At5g39150 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.585e-74
Identity = 135/197 (68.53%), Postives = 158/197 (80.20%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            DP  LQD CVAI+DPK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRAT+I +++EGTLYVGFV+S+Q NN L AKVLN GDVFVFP G+IHFQ NIGKT A A++ L+SQ  G +TIADTVFG+ P INPD L +AF LD  +VKDL+ KF
Sbjct:   23 DPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKF 219          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL115_ARATH (Germin-like protein subfamily 1 member 15 OS=Arabidopsis thaliana GN=At5g39120 PE=2 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 9.585e-74
Identity = 135/197 (68.53%), Postives = 158/197 (80.20%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            DP  LQD CVAI+DPK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRAT+I +++EGTLYVGFV+S+Q NN L AKVLN GDVFVFP G+IHFQ NIGKT A A++ L+SQ  G +TIADTVFG+ P INPD L +AF LD  +VKDL+ KF
Sbjct:   23 DPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKF 219          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL114_ARATH (Germin-like protein subfamily 1 member 14 OS=Arabidopsis thaliana GN=At5g39110 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.135e-73
Identity = 134/197 (68.02%), Postives = 157/197 (79.70%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            DP  LQD CVAI D K+GVFVNGKFCKDPK A+AEDFF+SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRAT+I +++EGTLYVGFV+S+Q NN L AKVLN GDVFVFP G+IHFQ NIGKT A A++ L+SQ  G +TIADTVFG+ P INPD L +AF LD  +VKDL+ KF
Sbjct:   24 DPSPLQDFCVAIGDLKNGVFVNGKFCKDPKQAKAEDFFYSGLNQAGTTNNKVKSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNVVKDLEAKF 220          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL119_ARATH (Germin-like protein subfamily 1 member 19 OS=Arabidopsis thaliana GN=At5g39180 PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 4.757e-73
Identity = 134/197 (68.02%), Postives = 157/197 (79.70%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            DP  LQD CVAI+DPK+GVFVNGKFCKDPK A+AEDFF SGL + G T N++  + T  NV+QIPGLNTLGIS  RIDYAPYGQ PPH HPRAT+I +++EGTLYVGFV+S+Q NN L AKVLN GDVFVFP G+IHFQ NIGKT A A++ L+SQ  G +TIAD VFG+ P INPD L +AF LD  +VKDL+ KF
Sbjct:   23 DPSPLQDFCVAIDDPKNGVFVNGKFCKDPKQAKAEDFFSSGLNQAGITNNKVQSNVTTVNVDQIPGLNTLGISLVRIDYAPYGQNPPHTHPRATEILVLVEGTLYVGFVSSNQDNNRLFAKVLNPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADIVFGSTPPINPDILAQAFQLDVNVVKDLEAKF 219          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL113_ARATH (Germin-like protein subfamily 1 member 13 OS=Arabidopsis thaliana GN=GLP6 PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 4.757e-73
Identity = 134/197 (68.02%), Postives = 158/197 (80.20%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            DP  LQD CVAI+D K+GVFVNGKFCKDPK A+AEDFFFSGL + G+T N++  + T  NV+QIPGLNT+GIS  RIDYAPYGQ PPH HPRAT+I +++EGTLYVGFV+S+Q NN L AKVL  GDVFVFP G+IHFQ NIGKT A A++ L+SQ  G +TIADTVFG+ P INPD L +AF LD  IVKDL+ KF
Sbjct:   24 DPSPLQDFCVAIDDLKNGVFVNGKFCKDPKQAKAEDFFFSGLNQAGSTNNKVRSNVTTVNVDQIPGLNTMGISLVRIDYAPYGQNPPHTHPRATEILVLIEGTLYVGFVSSNQDNNRLFAKVLYPGDVFVFPIGMIHFQVNIGKTPAVAFAGLSSQNAGVITIADTVFGSTPPINPDILAQAFQLDVNIVKDLEAKF 220          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL118_ARATH (Germin-like protein subfamily 1 member 18 OS=Arabidopsis thaliana GN=GLP2A PE=2 SV=2)

HSP 1 Score: 262.692 bits (670), Expect = 1.432e-69
Identity = 131/220 (59.55%), Postives = 162/220 (73.64%), Query Frame = 3
Query:   60 MKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            M+V Q L+ F             DP  LQD CVAI+D K GVFVNG+FCKDPK   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR ++I +++EGTLYVGFV+S+Q NN L AKVL+ GDVFVFP G+IHFQ N+GK  A A++ L+SQ  G +TIA+TVFG+NP I P+ L +AF LD  +VK+LQ KF
Sbjct:    1 MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNMPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL120_ARATH (Germin-like protein subfamily 1 member 20 OS=Arabidopsis thaliana GN=GLP5A PE=1 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.871e-69
Identity = 131/220 (59.55%), Postives = 162/220 (73.64%), Query Frame = 3
Query:   60 MKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            M+V Q L+ F             DP  LQD CVAI+D K GVFVNG+FCKDPK   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR ++I +++EGTLYVGFV+S+Q NN L AKVL+ GDVFVFP G+IHFQ N+GK  A A++ L+SQ  G +TIA+TVFG+NP I P+ L +AF LD  +VK+LQ KF
Sbjct:    1 MRVSQSLVPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPKRVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQVNVGKIPAVAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDASVVKELQAKF 219          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL116_ARATH (Germin-like protein subfamily 1 member 16 OS=Arabidopsis thaliana GN=At5g39130 PE=2 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.443e-69
Identity = 132/220 (60.00%), Postives = 162/220 (73.64%), Query Frame = 3
Query:   60 MKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            M+V Q LI F             DP  LQD CVAI+D K GVFVNG+FCKDP+   A+DFFFSGL  PGNT N++G + T  NV+QIPGLNT+GIS  RIDYAP+GQ PPH HPR ++I +++EGTLYVGFV+S+Q NN L AKVL+ GDVFVFP G+IHFQ NIGK  A A++ L+SQ  G +TIA+TVFG+NP I P+ L +AF LD  +VK+LQ KF
Sbjct:    1 MRVSQSLIPFAIIALVLSFVNAYDPSPLQDFCVAIDDLK-GVFVNGRFCKDPERVDAKDFFFSGLNVPGNTNNQVGSNVTTVNVDQIPGLNTMGISLVRIDYAPHGQNPPHTHPRGSEILVLVEGTLYVGFVSSNQDNNRLFAKVLHPGDVFVFPIGMIHFQLNIGKIPAIAFAGLSSQNAGVITIANTVFGSNPPIYPELLARAFQLDANVVKELQAKF 219          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL17_ARATH (Germin-like protein subfamily 1 member 7 OS=Arabidopsis thaliana GN=At3g05950 PE=2 SV=1)

HSP 1 Score: 257.299 bits (656), Expect = 6.018e-68
Identity = 126/197 (63.96%), Postives = 152/197 (77.16%), Query Frame = 3
Query:  129 DPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            DP  LQD CVA++D   GVFVNGKFCKDPK  +AEDFF SGL   GNT NR+G + T+ NV++IPGLNTLG+S  RID+AP GQ PPH HPRAT+I +V+EGTL VGFVTS+Q NN L +KVL  GDVFVFP G+IHFQ N+G+TNA A++ L SQ PG +TIAD VFG+ PSI P+ L KAF LD  +VK L+ +F
Sbjct:   26 DPSPLQDFCVAVDDAS-GVFVNGKFCKDPKYVKAEDFFTSGLNIAGNTINRVGSNVTNVNVDKIPGLNTLGVSLVRIDFAPGGQNPPHTHPRATEILVVVEGTLLVGFVTSNQDNNRLFSKVLYPGDVFVFPIGMIHFQVNVGRTNAVAFAGLGSQNPGTITIADAVFGSKPSIMPEILAKAFQLDVNVVKYLEARF 221          
BLAST of CK934576 vs. ExPASy Swiss-Prot
Match: GL18_ARATH (Germin-like protein subfamily 1 member 8 OS=Arabidopsis thaliana GN=GLP9 PE=2 SV=2)

HSP 1 Score: 253.062 bits (645), Expect = 1.135e-66
Identity = 122/222 (54.95%), Postives = 155/222 (69.82%), Query Frame = 3
Query:   54 ITMKVIQFLIGFXXXXXXXXXXXXTDPGHLQDVCVAINDPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRATKIFLVLEGTLYVGFVTSHQLNNTLIAKVLNKGDVFVFPRGLIHFQFNIGKTNASAYSALNSQFPGEVTIADTVFGANPSINPDFLGKAFHLDPKIVKDLQNKF 719
            +T+K + FL               +DP  LQD CV +N P DGVFVNGKFCKDP++  A+DFFFS L +PGNT N +G + T  NV  + GLNTLGIS  RIDYAP GQ PPH HPRAT+I +V +GTL VGF++S+Q  N L AK LN GDVFVFP GLIHFQFN+G T A A +AL+SQ  G +TIA+T+FG+ P ++P+ L +AF +D   V++LQ +F
Sbjct:    1 MTIKSLSFLAALSLFALTLPLVIASDPSPLQDFCVGVNTPADGVFVNGKFCKDPRIVFADDFFFSSLNRPGNTNNAVGSNVTTVNVNNLGGLNTLGISLVRIDYAPNGQNPPHTHPRATEILVVQQGTLLVGFISSNQDGNRLFAKTLNVGDVFVFPEGLIHFQFNLGGTPAVAIAALSSQNAGVITIANTIFGSKPDVDPNVLARAFQMDVNAVRNLQARF 222          
The following BLAST results are available for this feature:
BLAST of CK934576 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL117_ARATH9.585e-7468.53Germin-like protein subfamily 1 member 17 OS=Arabi... [more]
GL115_ARATH9.585e-7468.53Germin-like protein subfamily 1 member 15 OS=Arabi... [more]
GL114_ARATH2.135e-7368.02Germin-like protein subfamily 1 member 14 OS=Arabi... [more]
GL119_ARATH4.757e-7368.02Germin-like protein subfamily 1 member 19 OS=Arabi... [more]
GL113_ARATH4.757e-7368.02Germin-like protein subfamily 1 member 13 OS=Arabi... [more]
GL118_ARATH1.432e-6959.55Germin-like protein subfamily 1 member 18 OS=Arabi... [more]
GL120_ARATH1.871e-6959.55Germin-like protein subfamily 1 member 20 OS=Arabi... [more]
GL116_ARATH2.443e-6960.00Germin-like protein subfamily 1 member 16 OS=Arabi... [more]
GL17_ARATH6.018e-6863.96Germin-like protein subfamily 1 member 7 OS=Arabid... [more]
GL18_ARATH1.135e-6654.95Germin-like protein subfamily 1 member 8 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_D11 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_D11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934576 ID=CK934576; Name=CK934576; organism=Citrus sinensis; type=EST; length=722bp
GGGGAAATCACAACACTTGATTAAAGTTTGAGATAGGCACATCCTGTGAC
TTAATCACCATGAAGGTAATTCAATTTCTTATAGGTTTTGCCCTCTTGGC
TTTGGCTTCTTCTTTGGCCTCTGCCACTGACCCTGGCCATCTTCAAGATG
TCTGTGTAGCCATCAATGACCCCAAGGATGGTGTGTTTGTGAATGGGAAG
TTCTGCAAGGACCCCAAGCTTGCGAGAGCAGAAGATTTCTTCTTCTCAGG
GCTAGGCAAGCCTGGAAACACAGCAAATCGACTTGGTGTTGATGAAACAG
ATGCAAATGTTGAGCAAATTCCAGGACTCAACACCCTTGGCATATCAGCA
TTCCGTATTGACTATGCACCATATGGCCAAAGGCCACCTCACATTCACCC
CCGTGCCACCAAAATCTTCTTAGTCCTGGAAGGAACTCTTTATGTCGGTT
TTGTGACATCACACCAACTGAATAACACACTCATCGCAAAAGTTCTAAAT
AAGGGAGATGTTTTTGTGTTTCCACGAGGTTTGATTCACTTCCAATTCAA
CATTGGAAAAACAAATGCATCTGCCTATTCTGCTCTAAACAGCCAATTCC
CGGGTGAAGTTACCATAGCCGACACAGTCTTTGGAGCCAATCCTTCAATC
AATCCCGATTTTCTTGGCAAGGCATTCCACTTGGACCCAAAGATAGTGAA
AGATCTTCAAAATAAGTTCATT
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