CK934594

Overview
NameCK934594
Unique NameCK934594
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length824
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934594_ssr138 microsatellite CK934594_ssr138:138..149. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CK934594 vs. ExPASy Swiss-Prot
Match: TSSP_MOUSE (Thymus-specific serine protease OS=Mus musculus GN=Prss16 PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.991e-28
Identity = 72/175 (41.14%), Postives = 99/175 (56.57%), Query Frame = 1
Query:  295 QLWFNQTLDHFSPYDHRWFEQRYYELLDHFRSPDGPIFLRICGEYTCD--GIPSDYLAVLAKKFGAAVVSLEHRYYGKSSPFESLSTENLKYLSSKQALFDLAIFRQRYQESLNLKLKRGDAENTWFVFGISYPGALSAWFRLKFPHLTCGSLASSAVVQAIYNFTEFDQQIGVS 813
            Q W  Q LD F+  D R F QRY+    H    D P+FL I GE +     + + + A LA  +GA V+SLEHR+YG S P   L    L+YLSS+ AL D+A  RQ     LN+      + + W  FG SY G+L+ W RLKFPHL   ++ASSA + A+ +F+ ++Q +  S
Sbjct:   58 QGWLEQPLDPFNASDRRTFLQRYWVNDQHRTGQDVPVFLHIGGEGSLGPGSVMAGHPAALAPAWGALVISLEHRFYGLSMPAGGLDLALLRYLSSRHALADVASARQALSGLLNVS-----SSSPWICFGGSYAGSLATWARLKFPHLVFAAVASSAPLSAVVDFSAYNQVVARS 227          
BLAST of CK934594 vs. ExPASy Swiss-Prot
Match: TSSP_HUMAN (Thymus-specific serine protease OS=Homo sapiens GN=PRSS16 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 9.991e-28
Identity = 71/173 (41.04%), Postives = 98/173 (56.65%), Query Frame = 1
Query:  301 WFNQTLDHFSPYDHRWFEQRYYELLDHFRSPDGPIFLRICGEYTCD--GIPSDYLAVLAKKFGAAVVSLEHRYYGKSSPFESLSTENLKYLSSKQALFDLAIFRQRYQESLNLKLKRGDAENTWFVFGISYPGALSAWFRLKFPHLTCGSLASSAVVQAIYNFTEFDQQIGVS 813
            W  Q LD F+  D R F QRY+    H+   DGPIFL + GE +     +   + A LA  +GA V+SLEHR+YG S P   L    L++LSS+ AL D+   R       N+      + + W  FG SY G+L+AW RLKFPHL   S+ASSA V+A+ +F+E++  +  S
Sbjct:   61 WLEQLLDPFNVSDRRSFLQRYWVNDQHWVGQDGPIFLHLGGEGSLGPGSVMRGHPAALAPAWGALVISLEHRFYGLSIPAGGLEMAQLRFLSSRLALADVVSARLALSRLFNIS-----SSSPWICFGGSYAGSLAAWARLKFPHLIFASVASSAPVRAVLDFSEYNDVVSRS 228          
BLAST of CK934594 vs. ExPASy Swiss-Prot
Match: YM9I_CAEEL (Putative serine protease F56F10.1 OS=Caenorhabditis elegans GN=F56F10.1 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.221e-25
Identity = 70/167 (41.92%), Postives = 95/167 (56.89%), Query Frame = 1
Query:  304 FNQTLDHFSPYDHRWFEQRYYELLDHFRSPDGPIFLRICGEYTCDGI----PSDYLAVLAKKFGAAVVSLEHRYYGKSSPFESLSTENLKYLSSKQALFDLAIFRQRYQESLNLKLKRGDAENTWFVFGISYPGALSAWFRLKFPHLTCGSLASSAVVQAIYNFTEF 792
            F Q LDHF PY+ + + Q+Y+     F   +  IFL I GE   +G     P+      AK+FGA V  LEHR++G S P   + T +L+YL+++QAL DLA F +   +    K  R      W  FG SYPG+L+AWFR K+P LT GS+ASSA V    +F E+
Sbjct:   59 FTQKLDHFDPYNTKTWNQKYF-YNPVFSRNNSIIFLMIGGEGPENGKWAANPNVQYLQWAKEFGADVFDLEHRFFGDSWPIPDMQTSSLRYLTTQQALADLAFFIEFMNQQYGFKNPR------WVTFGGSYPGSLAAWFRQKYPQLTVGSVASSAPVNLKLDFYEY 218          
BLAST of CK934594 vs. ExPASy Swiss-Prot
Match: YM67_CAEEL (Putative serine protease K12H4.7 OS=Caenorhabditis elegans GN=K12H4.7 PE=1 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 1.264e-22
Identity = 72/197 (36.55%), Postives = 101/197 (51.27%), Query Frame = 1
Query:  238 PPVTMLNKLSGSTNYLTTNQLWFNQTLDHFSPYDHRWFEQRYYELLDHFRSPDGPIFLRICGEYTCDGIPSDY--------LAVLAKKFGAAVVSLEHRYYGKSSPFESLSTENLKYLSSKQALFDLAIF----RQRYQESLNLKLKRGDAENTWFVFGISYPGALSAWFRLKFPHLTCGSLASSAVVQAIYNFTEF 792
            PP++ ++ +    N +++    F QTLDHF     + F+QRYY     +++  GP FL + GE    G  S Y        +  LA K GA V  +EHR+YG++ P   +S  NLKYLSS QA+ D A F      ++ +  N K         W  FG SY GAL+AW R K P L   ++ SS  VQA  +F E+
Sbjct:   44 PPMSSVSHMINFDNVVSST---FTQTLDHFDSSVGKTFQQRYYHNNQWYKA-GGPAFLMLGGE----GPESSYWVSYPGLEITNLAAKQGAWVFDIEHRFYGETHPTSDMSVPNLKYLSSAQAIEDAAAFIKAMTAKFPQLANAK---------WVTFGGSYSGALAAWTRAKHPELVYAAVGSSGPVQAEVDFKEY 223          
BLAST of CK934594 vs. ExPASy Swiss-Prot
Match: PCP5_CAEEL (Prolyl carboxy peptidase like protein 5 OS=Caenorhabditis elegans GN=pcp-5 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.970e-19
Identity = 66/185 (35.68%), Postives = 103/185 (55.68%), Query Frame = 1
Query:  232 LMPPVTM--LNKLSGSTNYLTTNQLWFNQTLDHFSPYDHRWFEQRYYELLDHFRSPDGPIFLRICGEYTCDGIPSD--YLAVLAKKFGAAVVSLEHRYYGKSSPFESLSTENLK---YLSSKQALFDLAIFRQRYQESLNLKLKRGDAENTWFVFGISYPGALSAWFRLKFPHLTCGSLASSAVV 765
            L  PVT    +K   S       + +    +D F+  +   F+ RY+  +DH+ +  GPI      E + +    +  ++  LA +  AAVV +EHR+YGKS PF++ S  +++   YLSS+QAL D A+  Q ++   N K+K G  ++    FG SY G LSAWFR+K+PH+  G++A+SA V
Sbjct:   20 LRDPVTQNGASKFEKSIGKYKYEEGYLKAPIDPFAFTNDLEFDLRYFLNIDHYET-GGPILFYTGNEGSLEAFAENTGFMWDLAPELKAAVVFVEHRFYGKSQPFKNESYTDIRHLGYLSSQQALADFALSVQFFK---NEKIK-GAQKSAVIAFGGSYGGMLSAWFRIKYPHIVDGAIAASAPV 199          
BLAST of CK934594 vs. ExPASy Swiss-Prot
Match: DPP2_RAT (Dipeptidyl-peptidase 2 OS=Rattus norvegicus GN=Dpp7 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.373e-18
Identity = 71/217 (32.72%), Postives = 108/217 (49.77%), Query Frame = 1
Query:  172 PSWSTVMLFVLSM--LLSISNGLMPPVTMLNKLSGSTNYLTTNQLWFNQTLDHFS--PYDHRWFEQRYYELLDHFRSPDGPIFLRICGEYTCDGIP--SDYLAVLAKKFGAAVVSLEHRYYGKSSPFESLSTEN--LKYLSSKQALFDLAIFRQRYQESLNLKLKRGDAENTWFVFGISYPGALSAWFRLKFPHLTCGSLASSAVVQAIYNFTEFDQ 798
            PSW  V+L  L +  L + ++ ++ P    N              +F Q +DHF+   + ++ F QR+      ++  +GPIF     E     +   S ++  LA +  A +V  EHRYYGKS PF   ST+    + L+ +QAL D A+  Q  + +L ++    DA      FG SY G LSA+ R+K+PHL  G+LA+SA V A+      DQ
Sbjct:   14 PSWVLVLLLTLGLCSLQATADSVLDPDFREN--------------YFEQYMDHFNFESFSNKTFGQRFLVSDKFWKMGEGPIFFYTGNEGDIWSLANNSGFIVELAAQQEALLVFAEHRYYGKSLPFGVQSTQRGYTQLLTVEQALADFAVLLQALRHNLGVQ----DAPT--IAFGGSYGGMLSAYMRMKYPHLVAGALAASAPVIAVAGLGNPDQ 210          
BLAST of CK934594 vs. ExPASy Swiss-Prot
Match: PCP_MOUSE (Lysosomal Pro-X carboxypeptidase OS=Mus musculus GN=Prcp PE=2 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 1.036e-16
Identity = 56/163 (34.36%), Postives = 89/163 (54.60%), Query Frame = 1
Query:  298 LWFNQTLDHFSPYDHRWFEQRYYELLDHFRSPDGPIFLRICGE----YTCDGIPSDYLAVLAKKFGAAVVSLEHRYYGKSSPFESLS---TENLKYLSSKQALFDLAIFRQRYQESLNLKLKRGDAENTWFVFGISYPGALSAWFRLKFPHLTCGSLASSAVV 765
            L+F Q +DHF   D R F+QRY     H++   G I      E    + C+   + ++  +A++  A +V  EHRYYG+S PF   S   +++L +L+S+QAL D A   +  ++++      G         G SY G L+AWFR+K+PH+  G+LA+SA +
Sbjct:   49 LYFEQKVDHFGFADMRTFKQRYLVADKHWQRNGGSILFYTGNEGDIVWFCNN--TGFMWDVAEELKAMLVFAEHRYYGESLPFGQDSFKDSQHLNFLTSEQALADFAELIRHLEKTIP-----GAQGQPVIAIGGSYGGMLAAWFRMKYPHIVVGALAASAPI 204          
BLAST of CK934594 vs. ExPASy Swiss-Prot
Match: DPP2_HUMAN (Dipeptidyl-peptidase 2 OS=Homo sapiens GN=DPP7 PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 1.353e-16
Identity = 62/172 (36.05%), Postives = 92/172 (53.49%), Query Frame = 1
Query:  301 WFNQTLDHFS--PYDHRWFEQRYYELLDHFRSPDGPIFLRIC--GEYTCDGIPSDYLAVLAKKFGAAVVSLEHRYYGKSSPFESLSTE--NLKYLSSKQALFDLAIFRQRYQESLNLKLKRGDAENTWFVFGISYPGALSAWFRLKFPHLTCGSLASSAVVQAIYNFTEFDQ 798
            +F Q LDHF+   + ++ F QR+      +   +GPIF      G+       S ++A LA + GA +V  EHRYYGKS PF + ST+  + + L+ +QAL D A   +  +  L      G  +     FG SY G LSA+ R+K+PHL  G+LA+SA V A+    + +Q
Sbjct:   35 FFQQRLDHFNFERFGNKTFPQRFLVSDRFWVRGEGPIFFYTGNEGDVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRRDL------GAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLGDSNQ 200          
BLAST of CK934594 vs. ExPASy Swiss-Prot
Match: DPP2_MOUSE (Dipeptidyl-peptidase 2 OS=Mus musculus GN=Dpp7 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.768e-16
Identity = 68/209 (32.54%), Postives = 106/209 (50.72%), Query Frame = 1
Query:  172 PSWSTVMLFVLSM--LLSISNGLMPPVTMLNKLSGSTNYLTTNQLWFNQTLDHFS--PYDHRWFEQRYYELLDHFRSPDGPIFLRIC--GEYTCDGIPSDYLAVLAKKFGAAVVSLEHRYYGKSSPFESLSTEN--LKYLSSKQALFDLAIFRQRYQESLNLKLKRGDAENTWFVFGISYPGALSAWFRLKFPHLTCGSLASSAVVQAI 774
            PSW  V+L  L +  L + ++ ++ P                ++ +F Q +DHF+   + ++ F QR+      ++  +GPIF      G+       S ++  LA +  A +V  EHRYYGKS PF   ST+    + L+ +QAL D A+  Q  ++ L +     DA      FG SY G LSA+ R+K+PHL  G+LA+SA V A+
Sbjct:   14 PSWILVLLLSLGLCNLQARADRVLDP--------------DFHENYFEQYMDHFNFESFGNKTFGQRFLVSDKFWKMGEGPIFFYTGNEGDIWSFANNSGFMVELAAQQEALLVFAEHRYYGKSLPFGVQSTQRGYTQLLTVEQALADFAVLLQALRQDLGVH----DAPT--IAFGGSYGGMLSAYMRMKYPHLVAGALAASAPVVAV 202          
BLAST of CK934594 vs. ExPASy Swiss-Prot
Match: PCP1_CAEEL (Putative serine protease pcp-1 OS=Caenorhabditis elegans GN=pcp-1 PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.143e-16
Identity = 61/164 (37.20%), Postives = 81/164 (49.39%), Query Frame = 1
Query:  298 LWF-NQTLDHFSPYDHRWFEQRYYELLDHFRSPDGPIFLRICGE------YTCDGIPSDYLAVLAKKFGAAVVSLEHRYYGKSSPFES---LSTENLKYLSSKQALFDLAIFRQRYQESLNLKLKRGDAENTWFVFGISYPGALSAWFRLKFPHLTCGSLASSA 759
            +W+ N  LDHF+  D R F+ R     + F  P GPIF     E       T  G+  D    LA  F A+++  EHR+YG++ PF +    S  N+ YL+S+QAL D A      +   N       A      FG SY G LSAWFR K+PH+  G+ A SA
Sbjct:   44 VWYKNMKLDHFTWGDTRTFDMRVM-WNNTFYKPGGPIFFYTGNEGGLESFVTATGMMFD----LAPMFNASIIFAEHRFYGQTQPFGNQSYASLANVGYLTSEQALADYAELLTELKRDNNQFKMTFPAATQVISFGGSYGGMLSAWFRQKYPHIVKGAWAGSA 202          
The following BLAST results are available for this feature:
BLAST of CK934594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
TSSP_MOUSE9.991e-2841.14Thymus-specific serine protease OS=Mus musculus GN... [more]
TSSP_HUMAN9.991e-2841.04Thymus-specific serine protease OS=Homo sapiens GN... [more]
YM9I_CAEEL1.221e-2541.92Putative serine protease F56F10.1 OS=Caenorhabditi... [more]
YM67_CAEEL1.264e-2236.55Putative serine protease K12H4.7 OS=Caenorhabditis... [more]
PCP5_CAEEL4.970e-1935.68Prolyl carboxy peptidase like protein 5 OS=Caenorh... [more]
DPP2_RAT9.373e-1832.72Dipeptidyl-peptidase 2 OS=Rattus norvegicus GN=Dpp... [more]
PCP_MOUSE1.036e-1634.36Lysosomal Pro-X carboxypeptidase OS=Mus musculus G... [more]
DPP2_HUMAN1.353e-1636.05Dipeptidyl-peptidase 2 OS=Homo sapiens GN=DPP7 PE=... [more]
DPP2_MOUSE1.768e-1632.54Dipeptidyl-peptidase 2 OS=Mus musculus GN=Dpp7 PE=... [more]
PCP1_CAEEL5.143e-1637.20Putative serine protease pcp-1 OS=Caenorhabditis e... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004229_C06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934594 ID=CK934594; Name=CK934594; organism=Citrus sinensis; type=EST; length=824bp
GGGGACTGTCCGCTAAGCAATTGGAAGCGATGGCTATGGAACGGAACTAG
CTTCCATCTACAGAAGTAAGTGGGAAACTGGAAACTGGATACAAAACGAA
CACAGACACATCTCGTTCATTCTGCGGTGAGACCAAAAAATAAATAAATG
GAAGCTCCGTCGGTGAAGCCGCCGTCTTGGTCGACGGTCATGTTATTCGT
CTTATCGATGTTATTGAGCATCTCCAATGGGCTAATGCCACCTGTCACGA
TGCTTAACAAATTGTCTGGCAGCACCAATTACTTGACCACCAATCAACTC
TGGTTCAATCAGACTCTCGATCATTTCTCACCTTATGATCACCGTTGGTT
TGAGCAGCGATATTATGAATTACTTGACCACTTTCGATCTCCGGATGGAC
CTATTTTTTTGAGGATTTGTGGTGAATATACTTGCGATGGCATACCAAGT
GATTATCTTGCTGTTCTCGCAAAGAAGTTTGGAGCGGCTGTGGTTTCACT
TGAACATCGTTACTATGGGAAGAGCTCACCATTTGAATCATTATCGACAG
AAAATTTGAAATATCTTTCATCTAAGCAGGCACTCTTTGACTTGGCCATT
TTCCGACAGCGTTATCAGGAATCTTTAAACCTGAAGCTCAAAAGAGGAGA
TGCTGAGAATACGTGGTTTGTTTTTGGTATTTCATATCCTGGAGCCCTTA
GTGCATGGTTTCGTCTCAAATTTCCTCATCTAACGTGTGGAAGTCTTGCA
AGTTCTGCAGTCGTTCAGGCAATTTACAACTTCACTGAATTTGATCAGCA
GATTGGTGTCTCAGCTGGCCCTGA
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