CK934601

Overview
NameCK934601
Unique NameCK934601
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length364
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1889 contig Csv1_Contig1889:217..580. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CK934601 vs. ExPASy Swiss-Prot
Match: QCR6_SOLTU (Cytochrome b-c1 complex subunit 6 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 6.778e-12
Identity = 29/43 (67.44%), Postives = 34/43 (79.07%), Query Frame = 3 
Query:    6 EYEACVKRIEADDTGSKHRTGQYFDYLSCVDKCVAPKLFIQLK 134
            EY+AC KR+E D++G KH TGQYFDY  C+DKCVA KLF  LK
Sbjct:   27 EYQACTKRVEGDESGHKHCTGQYFDYWHCIDKCVAAKLFDHLK 69
The following BLAST results are available for this feature:
BLAST of CK934601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
QCR6_SOLTU6.778e-1267.44Cytochrome b-c1 complex subunit 6 OS=Solanum tuber... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004229_B06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934601 ID=CK934601; Name=CK934601; organism=Citrus sinensis; type=EST; length=364bp
GGGTTGAATATGAGGCTTGCGTTAAAAGGATTGAAGCTGATGATACTGGC
AGCAAGCATCGCACTGGGCAGTATTTTGACTACTTATCGTGTGTTGATAA
ATGTGTTGCCCCGAAGCTATTCATCCAGCTGAAGTGATTATGAAGTTAAT
AGGATATCTGCTGCCTTATTCTCGTTTCCTCTTTGCGAATGTCAGCCAAC
CATAGCCAAATGGTTTATTGGTTCATCCATCCCCTAGCTACCGTTTATTT
TGGTTTTGCTAATGGCTTTCCCCTTCCAGCCTTTTGGATTGAGAACTGAT
CTATAATAAAGAAAAGGCGTCCTTCATTATGATGTGAAAAAAAAAAAAAA
AAAAAAAAAAAAAA
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