CK934608
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_CITSI (Photosystem II CP47 chlorophyll apoprotein OS=Citrus sinensis GN=psbB PE=3 SV=1) HSP 1 Score: 516.924 bits (1330), Expect = 6.538e-146 Identity = 245/256 (95.70%), Postives = 245/256 (95.70%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_POPTR (Photosystem II CP47 chlorophyll apoprotein OS=Populus trichocarpa GN=psbB PE=3 SV=1) HSP 1 Score: 503.827 bits (1296), Expect = 5.727e-142 Identity = 237/256 (92.58%), Postives = 241/256 (94.14%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL+AVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWSITGGT+TNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_POPAL (Photosystem II CP47 chlorophyll apoprotein OS=Populus alba GN=psbB PE=3 SV=1) HSP 1 Score: 503.827 bits (1296), Expect = 5.727e-142 Identity = 237/256 (92.58%), Postives = 241/256 (94.14%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL+AVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWSITGGT+TNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_BUXMI (Photosystem II CP47 chlorophyll apoprotein OS=Buxus microphylla GN=psbB PE=3 SV=1) HSP 1 Score: 503.827 bits (1296), Expect = 5.727e-142 Identity = 237/256 (92.58%), Postives = 241/256 (94.14%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL+AVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWSITGGT+TNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_LOLPR (Photosystem II CP47 chlorophyll apoprotein OS=Lolium perenne GN=psbB PE=3 SV=1) HSP 1 Score: 502.671 bits (1293), Expect = 1.276e-141 Identity = 236/256 (92.19%), Postives = 241/256 (94.14%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL+AVHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSI+GGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIF DDRTGK SLDLPKIFGIHLFL+GVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ+VNPAWG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLAVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSISGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFSDDRTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQAVNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_VITVI (Photosystem II CP47 chlorophyll apoprotein OS=Vitis vinifera GN=psbB PE=3 SV=1) HSP 1 Score: 502.286 bits (1292), Expect = 1.666e-141 Identity = 236/256 (92.19%), Postives = 241/256 (94.14%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRLI+VHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWSITGGT+TNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFLSG+ACFGFG FHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLISVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_RANMC (Photosystem II CP47 chlorophyll apoprotein OS=Ranunculus macranthus GN=psbB PE=3 SV=1) HSP 1 Score: 501.516 bits (1290), Expect = 2.843e-141 Identity = 235/256 (91.80%), Postives = 241/256 (94.14%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL+AVHIMHTALV+GWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWSITGGT+TNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFLSG+ACFGFG FHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLAVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLQIFCDERTGKPSLDLPKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_TOBAC (Photosystem II CP47 chlorophyll apoprotein OS=Nicotiana tabacum GN=psbB PE=3 SV=1) HSP 1 Score: 501.13 bits (1289), Expect = 3.712e-141 Identity = 236/256 (92.19%), Postives = 240/256 (93.75%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_SOLTU (Photosystem II CP47 chlorophyll apoprotein OS=Solanum tuberosum GN=psbB PE=3 SV=1) HSP 1 Score: 501.13 bits (1289), Expect = 3.712e-141 Identity = 236/256 (92.19%), Postives = 240/256 (93.75%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256
BLAST of CK934608 vs. ExPASy Swiss-Prot
Match: PSBB_SOLLC (Photosystem II CP47 chlorophyll apoprotein OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 501.13 bits (1289), Expect = 3.712e-141 Identity = 236/256 (92.19%), Postives = 240/256 (93.75%), Query Frame = 3 Query: 180 MGLPWYRVHTVVLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITDSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLAIFVDDRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTM 947 MGLPWYRVHTVVLNDPGRL++VHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIT+SWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL IF D+RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTM Sbjct: 1 MGLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWGGWSITGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTM 256 The following BLAST results are available for this feature:
BLAST of CK934608 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 218
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934608 ID=CK934608; Name=CK934608; organism=Citrus sinensis; type=EST; length=948bpback to top |