CK934611

Overview
NameCK934611
Unique NameCK934611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10089 contig Csv1_Contig10089:10..856. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934611 vs. ExPASy Swiss-Prot
Match: ZN830_XENTR (Zinc finger protein 830 OS=Xenopus tropicalis GN=znf830 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.032e-15
Identity = 72/291 (24.74%), Postives = 129/291 (44.33%), Query Frame = 1
Query:   73 DAARKKAI--------FRAKLNAQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAI---KNIKAGATGNNTRVVSDAAKPEAGVDSSRSES----GSASQNAELE-------------NSAKLGKARPPS--VLPSNFFDNQEVKRPKTDSVKLVDPDSTKPSGV-----SAKTQALKSVVLENEMDELP-NGNAVHAEKGQPFKEHPEKSKQNAGSEAKQIKGALPEGFFDNKDADLLARGIKPVKPDVKDEYKEYEKLIQEDLKQVDDRLEEEE 837
            DA +KK +         +AK      +KRI SPL +YN     +C VC++ +KS+  W AH   ++H E +   K  KA  +  + +V         G +    ES    G+  Q   L+             +SAK    + PS  +L  ++ D+ EV+  + ++V        KP+ +     ++    L +   E++M  +  +G+ + A+  +   E  + + +           ALPEGFFD+ +AD   R +   K  +  E++E++K I++ +  V D +  EE
Sbjct:    3 DAGKKKLVQQEELRRLMKAKQRRSCSKKRIESPLAKYNSLGHLLCVVCNIQIKSELLWPAHILGKQHKEKVAELKGSKANISSPSNKVQLHHIMKRKGSEPENQESKRIKGTEDQPTALKTKLPEGFFETEETSSAKHAAEKAPSLKLLAGDYEDDDEVEGEEYENVNEASTSLQKPAEIPLPPPTSSADRLPADFFESKMPLVSHSGSVLKADIQEKIVERKDNTAE-----------ALPEGFFDDPEADAKVRKVDAPKDQMDKEWEEFQKEIRQ-VNSVSDAIVAEE 281          
BLAST of CK934611 vs. ExPASy Swiss-Prot
Match: ZN830_MOUSE (Zinc finger protein 830 OS=Mus musculus GN=Znf830 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.536e-14
Identity = 65/270 (24.07%), Postives = 120/270 (44.44%), Query Frame = 1
Query:   88 KAIFRAKLNAQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIKA--GAT-GNNTRVVSDAAKPEA-GVDSSRSESGSASQNAELE----------NSAKLGKARPPSVLPSNFFDNQEVK-----RPKTDSVKLVDPDSTKPSGVSAKTQALKSVVLENEMDELPNGNAVHAEKGQPFK-EHPEKSKQNAGSEAKQIKGALPEGFFDNKDADLLARGIKPVKPDVKDEYKEYEKLIQEDLKQVDDRLEEEE 837
            + + R K       KRI SP  +YN   Q  C +C+  +KS+  W  H   ++H E +  +K   GAT G +T  V  A K  A  V+S  ++   AS   +++          ++A+   ++P   L  ++ D +E +       + DS K +     K   +++  +   +V+  +  +  P    +    G   K E  EK  +   + A+    ALPEGFFD+ + D   R +   K  +  E+ E++K +++ +  + + +  EE
Sbjct:   22 RRLMREKQRLSTNRKRIESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHRERVAELKGAKGATQGPSTGTVPQATKRRATDVESQDAKKAKASAGPQVQPSTSASSANLDAARAAPSKPGLGLLPDYDDEEEEEEEGGGEERRDSSKHLPDAQGKEHSLASPRETTSNVLPNDPFNTNPPKAPLVPHSGSIEKAEIHEKVVERRENTAE----ALPEGFFDDPEVDAKVRKVDAPKDQMDKEWDEFQKAMRQ-VNTISEAIVAEE 286          
BLAST of CK934611 vs. ExPASy Swiss-Prot
Match: ZN830_XENLA (Zinc finger protein 830 OS=Xenopus laevis GN=znf830 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.115e-13
Identity = 67/277 (24.19%), Postives = 119/277 (42.96%), Query Frame = 1
Query:   88 KAIFRAKLNAQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIK----AGATGNNT--------RVVSDAAKPEAGVDSSRSESGSASQNA------ELENSAKLGKARPPSVLPSNFFD--------NQEVKRPKTDSVKLVDPDSTKPSGVSAKTQALKSVVLENEMDELP-NGNAVHAEKGQPFKEHPEKSKQNAGSEAKQIKGALPEGFFDNKDADLLARGIKPVKPDVKDEYKEYEKLIQEDLKQVDDRLEEEE 837
            + + +AK      +KRI SPL +YN      C VC+ ++KS+  W AH   ++H E +  +K      ++ +NT        R  S+  K E+       +  SAS         E E ++  G A    +L  ++ D         +E +  K  S  L+ P        ++    L +   EN+M  +  +G+ + A+  +   E  E + +           ALPEGFFD+ + D   R +   K  +  E++E++K I++ +  V + +  EE
Sbjct:   16 RKLMKAKQRESSSKKRIESPLAKYNSLGHLSCVVCNSLIKSELLWPAHILGKQHKEKVAELKGTKATTSSPSNTIEYPRITKRKGSEPEKQESKRTKGSEDHPSASTTKLPEEFFEKEKTSSAGNAPSLKLLAGDYEDVDDDDAEEGEEYENAKEASSSLLKPAEIPLPPPTSSADNLPADFFENKMPLVSHSGSVLKADIQEKIVERKENTAE-----------ALPEGFFDDPEVDAKVRKVDAPKDQMDKEWEEFQKEIRQ-VNTVSEAIVAEE 280          
BLAST of CK934611 vs. ExPASy Swiss-Prot
Match: ZN830_RAT (Zinc finger protein 830 OS=Rattus norvegicus GN=Znf830 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.325e-11
Identity = 65/277 (23.47%), Postives = 114/277 (41.16%), Query Frame = 1
Query:   88 KAIFRAKLNAQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAIKNIKA--GAT-------------GNNTRVVS-DAAKPEAGVDSSRSESGSASQNAELEN-------SAKLGKARPPSVLPSNFFDNQEV---KRPKTDSVKLVDPDSTKPSGVSAKTQALKSVVLENEMDELPNGNAVHAEKGQPFK-EHPEKSKQNAGSEAKQIKGALPEGFFDNKDADLLARGIKPVKPDVKDEYKEYEKLIQEDLKQVDDRLEEEE 837
            + + + K       KRI SP  +YN   Q  C +C+  +KS+  W  H   ++H E +  +K   GAT                T V S DA K +A VD  +  + ++S N E          S+K G    P        + +E       + DS K +     +   +++  +   +V+  +  +  P    +    G   K E  EK  +   + A+    ALPEGFFD+ + D   R +   K  +  E+ E++K +++ +  + + +  EE
Sbjct:   22 RRLMKEKQRLSTNRKRIESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHRERVAELKGAKGATQGPSAGTAPQPTKRKTTDVESQDAKKAKASVDQVQPSTSASSANFEKSGKEATRVASSKTGLGLLPDYEEEEEEEEEEELGGGEERRDSSKHLPDAQGREHSLASPRETTSNVLPNDPFNTNPPKAPLVPHSGSIEKAEIHEKVVERRENTAE----ALPEGFFDDPEVDAKVRKVDAPKDQMDKEWDEFQKAMRQ-VNTISEAIVAEE 293          
BLAST of CK934611 vs. ExPASy Swiss-Prot
Match: ZN830_HUMAN (Zinc finger protein 830 OS=Homo sapiens GN=ZNF830 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.325e-11
Identity = 68/280 (24.29%), Postives = 119/280 (42.50%), Query Frame = 1
Query:   88 KAIFRAKLNAQKKEKRINSPLVRYNEFDQPVCRVCDVVLKSDSQWDAHQASRKHHEAI---KNIKAGATGNNTRVVSDAAKPEA----GVDSSRSESG-----SASQNAELENSAKLGK----ARPP-----SVLPSNFFDNQEV--------KRPKTDSVKLVDPDSTKPSGVSAKTQALKSVVLENEMDELPNGNAVHAEKGQPFK-EHPEKSKQNAGSEAKQIKGALPEGFFDNKDADLLARGIKPVKPDVKDEYKEYEKLIQEDLKQVDDRLEEEE 837
            + + + K       KRI SP  +YN   Q  C +C+  +KS+  W  H   ++H E +   K  K  + G++      + K +A      D  R+++        S +A   N  K+GK    A P      S+LP ++ D +E         +R + D+ K +     K   VS+  +   SV+  +     P    +    G   K E  EK  +   + A+    ALPEGFFD+ + D   R +   K  +  E+ E++K +++ +  + + +  EE
Sbjct:   22 RRLMKEKQRLSTSRKRIESPFAKYNRLGQLSCALCNTPVKSELLWQTHVLGKQHREKVAELKGAKEASQGSSASSAPQSVKRKAPDADDQDVKRAKATLVPQVQPSTSAWTTNFDKIGKEFIRATPSKPSGLSLLP-DYEDEEEEEEEEEGDGERKRGDASKPLSDAQGKEHSVSSSREVTSSVLPNDFFSTNPPKAPIIPHSGSIEKAEIHEKVVERRENTAE----ALPEGFFDDPEVDARVRKVDAPKDQMDKEWDEFQKAMRQ-VNTISEAIVAEE 295          
The following BLAST results are available for this feature:
BLAST of CK934611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ZN830_XENTR2.032e-1524.74Zinc finger protein 830 OS=Xenopus tropicalis GN=z... [more]
ZN830_MOUSE6.536e-1424.07Zinc finger protein 830 OS=Mus musculus GN=Znf830 ... [more]
ZN830_XENLA1.115e-1324.19Zinc finger protein 830 OS=Xenopus laevis GN=znf83... [more]
ZN830_RAT2.325e-1123.47Zinc finger protein 830 OS=Rattus norvegicus GN=Zn... [more]
ZN830_HUMAN2.325e-1124.29Zinc finger protein 830 OS=Homo sapiens GN=ZNF830 ... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004228_H05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IIIF_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934611 ID=CK934611; Name=CK934611; organism=Citrus sinensis; type=EST; length=847bp
GGGGAAACGAATCAAAATCAGTGACGACGAGCAGACGACGAATCCCTTTC
GCTTCAATCTTCGTAAAAGATGGATGCAGCGCGGAAAAAGGCAATATTTC
GCGCAAAGTTGAATGCTCAGAAGAAGGAGAAGCGAATAAACTCTCCTCTT
GTGAGGTATAACGAATTTGATCAACCTGTCTGTCGAGTTTGTGATGTTGT
TTTGAAATCTGACTCCCAGTGGGATGCCCACCAAGCTTCTCGTAAACATC
ATGAGGCAATTAAAAACATCAAAGCCGGTGCTACTGGAAATAATACTCGG
GTGGTGAGTGATGCTGCGAAGCCTGAGGCTGGTGTGGATTCTTCTAGAAG
TGAAAGCGGTTCAGCGTCACAGAATGCAGAGCTTGAAAACTCAGCGAAAT
TGGGTAAAGCTCGCCCGCCTTCTGTGCTTCCTTCGAATTTCTTTGATAAT
CAGGAGGTGAAGAGACCAAAAACTGATTCTGTCAAGTTGGTGGATCCTGA
TTCAACCAAACCGTCTGGGGTTTCTGCTAAAACTCAGGCATTGAAGTCAG
TAGTCTTGGAAAATGAGATGGATGAGCTGCCTAATGGTAATGCTGTACAT
GCAGAAAAGGGTCAGCCTTTCAAGGAGCATCCAGAGAAATCAAAGCAGAA
TGCAGGTTCAGAAGCCAAGCAAATAAAGGGAGCTCTCCCTGAAGGCTTCT
TTGATAATAAAGATGCTGATTTACTTGCACGTGGAATTAAACCTGTTAAA
CCAGATGTCAAAGATGAGTACAAGGAATATGAAAAGTTGATCCAAGAGGA
CTTGAAACAGGTGGATGACCGTTTAGAAGAAGAGGAGATTGATGCTG
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