CK934616
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODBA_DICDI (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Dictyostelium discoideum GN=bkdA PE=3 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 3.788e-43 Identity = 78/162 (48.15%), Postives = 119/162 (73.46%), Query Frame = 2 Query: 5 FRSGGIVVKG-RAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKEIIQKYPQDYP 487 ++ GI +G YG+++IRVDGND AVY + AR++A+ E+ PVL+EA+TYRVGHHSTSDDS++YRT++EI WK ++P++R RN++ +GWWS+ +E E ++ + + +++ AEK KP+I E+F+DVYD P NL EQ+K+L E ++ YP +YP Sbjct: 267 YKGDGIAGRGPNGYGMKTIRVDGNDIWAVYNVTKLARKIAVEEQVPVLIEAMTYRVGHHSTSDDSSRYRTVEEINAWKEGKNPISRLRNYMNHKGWWSDAQEKETIANARTTVRESLVNAEKQYKPSINEIFTDVYDKPTPNLIEQQKELIEHLKLYPDEYP 428
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODBA_PANTR (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Pan troglodytes GN=BCKDHA PE=2 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.455e-42 Identity = 77/163 (47.24%), Postives = 110/163 (67.48%), Query Frame = 2 Query: 5 FRSGGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKEIIQKYPQDYPTD 493 +R GI +G YGI SIRVDGND AVY A + AR A++E +P L+EA+TYR+GHHSTSDDS+ YR++DE+ YW + PV+R R+++ QGWW E++E R +K++++A + AE+ KP LFSDVY P+ L +Q++ L +Q Y + YP D Sbjct: 279 YRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPVSRLRHYLLSQGWWDEEQEKAWRKQSRKKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYPLD 441
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODBA_MOUSE (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Mus musculus GN=Bckdha PE=1 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.455e-42 Identity = 76/163 (46.63%), Postives = 110/163 (67.48%), Query Frame = 2 Query: 5 FRSGGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKEIIQKYPQDYPTD 493 +R GI +G YGI+SIRVDGND AVY A + AR A++E +P L+EA+TYR+GHHSTSDDS+ YR++DE+ YW + P++R R ++ QGWW E++E R +K++++A + AE+ KP + LFSDVY P+ L Q++ L +Q Y + YP D Sbjct: 276 YRGDGIAARGPGYGIKSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRQYLLNQGWWDEEQEKAWRKQSRKKVMEAFEQAERKLKPNPSLLFSDVYQEMPAQLRRQQESLARHLQTYGEHYPLD 438
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODBA_RAT (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial (Fragment) OS=Rattus norvegicus GN=Bckdha PE=1 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 5.469e-42 Identity = 76/163 (46.63%), Postives = 109/163 (66.87%), Query Frame = 2 Query: 5 FRSGGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKEIIQKYPQDYPTD 493 +R GI +G YGI SIRVDGND AVY A + AR A++E +P L+EA+TYR+GHHSTSDDS+ YR++DE+ YW + P++R R ++ QGWW E++E R +K++++A + AE+ KP + LFSDVY P+ L Q++ L +Q Y + YP D Sbjct: 275 YRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRQYLLNQGWWDEEQEKAWRKQSRKKVMEAFEQAERKLKPNPSLLFSDVYQEMPAQLRRQQESLARHLQTYGEHYPLD 437
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODBA_HUMAN (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Homo sapiens GN=BCKDHA PE=1 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 7.143e-42 Identity = 75/163 (46.01%), Postives = 110/163 (67.48%), Query Frame = 2 Query: 5 FRSGGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKEIIQKYPQDYPTD 493 +R GI +G YGI SIRVDGND AVY A + AR A++E +P L+EA+TYR+GHHSTSDDS+ YR++DE+ YW + P++R R+++ QGWW E++E R ++++++A + AE+ KP LFSDVY P+ L +Q++ L +Q Y + YP D Sbjct: 279 YRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRRKVMEAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYPLD 441
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODBA_MACFA (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Macaca fascicularis GN=BCKDHA PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.218e-41 Identity = 75/163 (46.01%), Postives = 110/163 (67.48%), Query Frame = 2 Query: 5 FRSGGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKEIIQKYPQDYPTD 493 +R GI +G YGI SIRVDGND AVY A + AR A++E +P L+EA+TYR+GHHSTSDDS+ YR++DE+ YW + P++R R+++ QGWW E++E R +K++++A + AE+ KP LFSDVY P+ L +Q++ L +Q Y + YP + Sbjct: 279 YRGDGIAARGPGYGIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHYLLSQGWWDEEQEKAWRKQSRKKVMKAFEQAERKPKPNPNLLFSDVYQEMPAQLRKQQESLARHLQTYGEHYPLE 441
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODBA_BOVIN (2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial OS=Bos taurus GN=BCKDHA PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 4.630e-41 Identity = 73/163 (44.79%), Postives = 111/163 (68.10%), Query Frame = 2 Query: 5 FRSGGIVVKGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTSDDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKEIIQKYPQDYPTD 493 +R GI +G YGI SIRVDGND AVY A + AR A++E +P L+EA+TYR+GHHSTSDDS+ YR++DE+ YW + P++R R+ ++ +GWW +++E R +K++++A + AE+ KP + +FSDVY P+ L +Q++ L +Q Y + YP D Sbjct: 289 YRGDGIAARGPGYGILSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEAMTYRIGHHSTSDDSSAYRSVDEVNYWDKQDHPISRLRHHLQSRGWWDDEQEKAWRKQSRKKVMEAFEQAERKLKPNPSLIFSDVYQEMPAQLRKQQESLARHLQTYGEHYPLD 451
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODPA_STAES (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.207e-26 Identity = 63/144 (43.75%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 29 KGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTS-DDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKE 457 K + GI I+VDG DALAVY A ARE A++ + P ++E LTYR G H+ + DD T+YRT DE W+ ++ P+ RFR ++E +G W+E +E E+ K ++ AI+ A+ TEK +T L +Y+ P NLAEQ + KE Sbjct: 224 KAISVGIPGIQVDGMDALAVYQATLEARERAVAGEGPTVIETLTYRYGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKYLEAKGLWNEDKENEVVERAKSEIKAAIKEADNTEKQTVTSLMDIMYEEMPQNLAEQYEIYKE 366
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODPA_STAEQ (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.207e-26 Identity = 63/144 (43.75%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 29 KGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTS-DDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKE 457 K + GI I+VDG DALAVY A ARE A++ + P ++E LTYR G H+ + DD T+YRT DE W+ ++ P+ RFR ++E +G W+E +E E+ K ++ AI+ A+ TEK +T L +Y+ P NLAEQ + KE Sbjct: 224 KAISVGIPGIQVDGMDALAVYQATLEARERAVAGEGPTVIETLTYRYGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKYLEAKGLWNEDKENEVVERAKSEIKAAIKEADNTEKQTVTSLMDIMYEEMPQNLAEQYEIYKE 366
BLAST of CK934616 vs. ExPASy Swiss-Prot
Match: ODPA_STAAW (Pyruvate dehydrogenase E1 component subunit alpha OS=Staphylococcus aureus (strain MW2) GN=pdhA PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.207e-26 Identity = 63/144 (43.75%), Postives = 91/144 (63.19%), Query Frame = 2 Query: 29 KGRAYGIRSIRVDGNDALAVYTAVQAAREMAISEKRPVLVEALTYRVGHHSTS-DDSTKYRTLDEIEYWKTERSPVNRFRNWVERQGWWSEQEETELRSSIKKQLLQAIQVAEKTEKPAITELFSDVYDVPPSNLAEQEKQLKE 457 K A GI I+VDG DALAVY A + AR+ A++ + P L+E +TYR G H+ + DD T+YRT DE W+ ++ P+ RFR ++E +G W+E +E E+ K + AI+ A+ TEK +T L +Y+ P NLAEQ + KE Sbjct: 224 KAIAVGIPGIQVDGMDALAVYQATKEARDRAVAGEGPTLIETMTYRYGPHTMAGDDPTRYRTSDEDAEWE-KKDPLVRFRKFLENKGLWNEDKENEVIERAKADIKAAIKEADNTEKQTVTSLMEIMYEDMPQNLAEQYEIYKE 366 The following BLAST results are available for this feature:
BLAST of CK934616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934616 ID=CK934616; Name=CK934616; organism=Citrus sinensis; type=EST; length=704bpback to top |